Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g00999 ATTAAAAAAACATTAGATTTGATTCTCACAGAGAGAATGGGATGTGGGCATTTTTGGTGGCTCTTGTTGCTTTGCATATTCAGTGAAGGCTTCTTGACAAAGGAGGTCTTAGGCCTGGCCTGCAACTGGGGAACCCGTTCAACTCATCCGCTCTCACCCGACATCGTCGTTAAGCTGATGAGAGACAACGGGTTCAACAAGGCGAAGCTCTTCGAAGCCGATCCCGGGGCATTGAAGGCACTAGGCAACTCTGGCATCCAGGTTATGGTGGGCATACCAAACGAGTTCTTGGCTCCGCTTGCAAGCGGCGTCCGAGTAGCTGAGGATTGGGTGTCCAAAAACGTCTCCTACTTTATATCCAAGTTCGGTGCAGATATCAGATATGTAGCCGTGGGAAATGAACCTTTCCTCAAGACATACAAAGACACTTACCTGCAAACCACGCTTCCGGCTATGGAGAATATCCAAGCAGCTCTGATTAAAGCAGGCCTGGGTCGTCAAGTGAAGGTGACGATCCCCCTAAACGCCGACGTTTACCAGACCGACACTGGTCTTCCTTCCGGCGGCGACTTCCGGTCTGATATCCGGGATCTCATGATTGCCATCATCACATTTCTCAACAACAATGGTGGTCCTCTAACCATCAACATCTATCCATTCCTCAGCCTATATGCAGACCCTCATTTCCCCAAGGACTACGCCTTCTTCAATAATGGGGGCGGCTCTGCTGCTCCCGTCGTCGACGGTCCCATTTCTTACACGAACGTGATGGAGGCGAATTTCGATACACTGATTTGGGCGCTGGAGAAGAATGGATTCCCTTCGATGCCGGTTATAATTGGGGAAATTGGATGGCCGACTGATGGAGATCCGAATGCGAACGTAGGAAACGCTCAGCTCTTCAATCAAGGGCTTCTGAACCGAATAATTTCAGGCCAGGGCACCCCGAAGCGGCCATCACCGTTGGAGACATACCTCTTCGGGCTCATCGATGAGGATGCGAAAAGCATCCAACCTGGAAACTTCGAGCGGCATTGGGGCATCTTTTATTACGACGGCTCCATCAAATACCCGCTGAACATATCGGCGAACGGAGAGACACTGGTGCCGGCGAAGGGAGTGAAGTACCTCCCAAGGCAATGGTGCGTAATGTCGCCGGGGGCCAGTATTTCCGATCCAAGTTTGGGAGATAGCATCAACTACGCCTGCTCACACGCGGATTGCACGAGCCTAGGGCTCGGTTCGTCGTGCGGCGAAATGGACGCCAGGAGCAATGCGTCTTATGCTTTCAATGCGTATTACCAGACTATGGATCAGAAAAGAGACGCGTGTATATTTTCGAATCTAAGTGTGGTAACCACGACCGATCCTTCTCCGACTTCTGATCAGGCCGGAGGCGGTGGTGGTTGCCGATTCACAATTATGATGGATCAAAGGAAGAGTGTGCAGACACGGCGGCGTCCGCCAACTTCTTCGTCCTCATCGCGGGCTACCGTAGGAGGAGAAAATGTATATCTACACTTGATTCAACTTCTTCTTGGCCTCCTGGTTTTTGAGCTTCGCCCACCATTAATGAGCTTCCTCATGGTGTTCGTCTTTCTCCTTGTTCCATTGGTTATACTGTAA 1626 50.92 IKKTLDLILTERMGCGHFWWLLLLCIFSEGFLTKEVLGLACNWGTRSTHPLSPDIVVKLMRDNGFNKAKLFEADPGALKALGNSGIQVMVGIPNEFLAPLASGVRVAEDWVSKNVSYFISKFGADIRYVAVGNEPFLKTYKDTYLQTTLPAMENIQAALIKAGLGRQVKVTIPLNADVYQTDTGLPSGGDFRSDIRDLMIAIITFLNNNGGPLTINIYPFLSLYADPHFPKDYAFFNNGGGSAAPVVDGPISYTNVMEANFDTLIWALEKNGFPSMPVIIGEIGWPTDGDPNANVGNAQLFNQGLLNRIISGQGTPKRPSPLETYLFGLIDEDAKSIQPGNFERHWGIFYYDGSIKYPLNISANGETLVPAKGVKYLPRQWCVMSPGASISDPSLGDSINYACSHADCTSLGLGSSCGEMDARSNASYAFNAYYQTMDQKRDACIFSNLSVVTTTDPSPTSDQAGGGGGCRFTIMMDQRKSVQTRRRPPTSSSSSRATVGGENVYLHLIQLLLGLLVFELRPPLMSFLMVFVFLLVPLVIL 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46519384 46521599 + Bma024085.1 Bma06g00999 84501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g00999 541 Pfam X8 domain 380 449 IPR012946 -
Bma06g00999 541 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 486 IPR044965 GO:0004553|GO:0005975
Bma06g00999 541 SUPERFAMILY (Trans)glycosidases 41 360 IPR017853 -
Bma06g00999 541 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 18 486 - -
Bma06g00999 541 Pfam Glycosyl hydrolases family 17 39 360 IPR000490 GO:0004553|GO:0005975
Bma06g00999 541 SMART X8_cls 380 472 IPR012946 -
Bma06g00999 541 Gene3D - 378 473 - -
Bma06g00999 541 ProSitePatterns Glycosyl hydrolases family 17 signature. 276 289 IPR000490 GO:0004553|GO:0005975
Bma06g00999 541 Gene3D Glycosidases 39 367 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00999 Bma11g00622 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00999 Bma-Chr6:46519384 Bma11g00790 Bma-Chr11:22933489 0 dispersed
Bma11g00065 Bma-Chr11:771085 Bma06g00999 Bma-Chr6:46519384 3.24E-55 dispersed
Bma06g00999 Bma-Chr6:46519384 Bma01g02140 Bma-Chr1:77929909 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g00999 - - fve:101299330 702.975