Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01014 GAGAAAATTCCCATTGATGAGGTGTTTCAGCAGTTGAAATGCACCCGAGAAGGATTATCGTCCCAGGAGGGAGAAAACCGGCTTCAAATTTTTGGTCCAAACAAGTTAGAAGAGAAAAAGGAAAGCAAGATCCTGAAATTTTTAGGATTCATGTGGAATCCTCTTTCATGGGTGATGGAGGCTGCTGCTATAATGGCAATTGCCTTAGCTAATGGCGGGGGAAAGCCTCCAGATTGGCAGGATTTTCTTGGAATTATCTGTCTGTTGGTTATCAACTCCACCATTAGTTTCATTGAAGAAAATAATGCAGGCAATGCAGCTGCTGCTCTCATGGCCGGTCTTGCTCCTAAAACTAAGGTTCTTAGAGATGGAAAATGGAGCGAACAAGATGCTGCAATTTTGGTACCAGGAGATGTCATTAGTGTTAAGTTGGGCGATATCATCCCGGCCGATGCCCGTCTTCTTGAGGGCGATCCATTGAAAATTGACCAATCTGCTCTCACTGGAGAATCACTCCCAGTGACAAAACATCCCGGGGATGAAGTTTTCTCTGGTTCAACATGCAAGCAAGGAGAGATTGAAGCTGTTGTTATTGCCACTGGTGTTCATACATTCTTTGGCAAGGCTGCTCATCTCGTAGATAGCACCAACCAAGTTGGTCACTTTCAGAAGGTTCTCACCTCGATTGGGAACTTTTGTATATGCTCTATAGCAGTGGGAATGTTGATAGAACTTATAGTAATGTACCCGATTCAGCATCGTGCGTATCGTGATGGAATTGACAATCTTCTCGTTCTTTTGATCGGAGGAATTCCAATTGCCATGCCTACTGTTTTATCGGTGACCATGGCAATTGGGTCGCACAAGCTATCTCAGCAGGGTGCAATCACCAAGCGAATGACTGCAATAGAAGAAATGGCTGGCATGGATGTTCTTTGCAGTGACAAAACTGGGACACTCACTCTTAACAAGCTTAGCGTTGATAGGAGTTTAATTGAGGTATTTGCCAAAGATGTCGATAAAGAGCACGTCATTTTACTGGCAGCAAGAGCATCAAGGACAGAAAACCAAGATGCCATTGATGCCGTCTTCGTTGGAATGCTAGCAGATCCAAAGGAGGCTCGAGCTGGAATAACAGAAGTGCACTTCTTACCCTTCAATCCTGTTGATAAAAGAACTGCATTGACATATATTGATTCGAAGGGAAATTGGCATCGAGCCAGTAAGGGTGCTCCAGAGCAGATTTTAGCTCTATGCAACTGCAAGGAAGACGTTAAGAAGAAAGTTCATAATATAATTGACAAATTTGCAGAACGTGGCCTCCGGTCGTTAGCTGTAGCTAGACAGGTTGTTCCCGAGAAAACTAAGGAAAGTCCAGGTGGTCCATGGGAATTTGTCGGTTTATTGCCTCTCTTTGATCCGCCAAGACATGACAGTGCTGAGACGATACGAAGAGCTCTCCATCTTGGTGTGAATGTCAAGATGATTACCGGTGACCAACTTGCCATAGCTAAGGAAACTGGCCGCAGACTTGGAATGGGAACAAACATGTATCCTAGCGCTTCCTTACTTGGCCAACACAAGGATGAAAGCATTGCTGGCCTTCCCGTTGAAGAGCTGATAGAGAAAGCAGATGGCTTTGCTGGAGTTTTCCCAGAGCACAAATATGAAATTGTGAAGAAATTGCAAGAGCAAAAACACATCTGTGGAATGACTGGGGATGGAGTGAATGATGCTCCTGCTTTGAAGAAAGCAGATATTGGAATTGCAGTTGCTGATGCTACTGATGCTGCAAGAAGTGCATCAGATATTGTTCTCACTGAACCCGGTCTTAGTGTCATTATTAGTGCAGTCCTTACAAGCCGAGCTATTTTTCAAAGAATGAAGAATTATACGATTTATGCAGTCTCCATTACAATCCGTATTGTTTTTGGTTTCATGTTCATTGCTCTCATATGGAAATTTGATTTCTCCCCATTCATGGTTTTAATTATTGCCATTCTGAACGACGGTACGATAATGACAATCTCCAAGGATAGGGTGAAACCATCTCCACTCCCAGATAGCTGGAAATTGAAAGAAATATTTGCCACTGGCGTTGTGCTTGGAGGTTACTTGGCATTAATGACTGTCATTTTCTTTTGGTTAATGAAAGACACTGATTTCTTCTCGCAAAAGTTTGGCGTGAGATCACTTAGGGATAGCCCCGAAGAGATGATGGCCGCTTTATATCTTCAAGTTAGCATAGTTAGCCAGGCGCTCATTTTTGTGACTCGCTCTCGTAGCTGGTCATATGTCGAACGCCCCGGTTTGCTTTTACTGACGGCTTTTTTCATTGCTCAACTGGTTGCCACTGTCATAGCTGTTTATGCTAACTGGAAGTTCGCAAAAATTAAAGGAGCTGGATGGGGTTGGGCCGGTGTAATCTGGCTTTACAGTATCGTGTTCTACGTTCCACTTGACTTGATGAAATTTGCTATTCGTTACATCTTAAGTGGGAAGGCATGGGTTAACATGCTTGAAAACAAGACTGCATTTACCACCAAGAAAGACTATGGAAAAGGGGAGAGAGAGGCTCAATGGGCTCTTGCTCAAAGAACCCTCCATGGCCTTCAACCACCACAAAAAGCTGATCTTTTCCATGAAAAGAGCAGCTACCGAGAACTTTCTGAGATCGCCGAGCAAGCCAAGAGAAGAGCCGAGATGGCTAGGCTTCGAGAGCTCAACACGCTCAAAGGCCATGTCGAGTCAGTGGTGAAGCTGAAAGGGCTAGACATCGACACGATTCAGCAGCATTACACGGTATGA 2808 44.2 EKIPIDEVFQQLKCTREGLSSQEGENRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFLGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQDAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSIGNFCICSIAVGMLIELIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRSLIEVFAKDVDKEHVILLAARASRTENQDAIDAVFVGMLADPKEARAGITEVHFLPFNPVDKRTALTYIDSKGNWHRASKGAPEQILALCNCKEDVKKKVHNIIDKFAERGLRSLAVARQVVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQEQKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWLMKDTDFFSQKFGVRSLRDSPEEMMAALYLQVSIVSQALIFVTRSRSWSYVERPGLLLLTAFFIAQLVATVIAVYANWKFAKIKGAGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWVNMLENKTAFTTKKDYGKGEREAQWALAQRTLHGLQPPQKADLFHEKSSYRELSEIAEQAKRRAEMARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 935
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46708766 46714407 + Bma024099.1 Bma06g01014 84516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01014 935 Gene3D - 325 472 IPR023299 GO:0000166
Bma06g01014 935 Gene3D - 78 799 - -
Bma06g01014 935 Gene3D - 310 609 IPR023214 -
Bma06g01014 935 PANTHER PLASMA MEMBRANE ATPASE 1 915 - -
Bma06g01014 935 Coils Coil 886 906 - -
Bma06g01014 935 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 831 IPR023298 -
Bma06g01014 935 Pfam E1-E2 ATPase 115 292 - -
Bma06g01014 935 CDD P-type_ATPase_H 18 825 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma06g01014 935 SFLD C1.7: P-type atpase like 295 623 - -
Bma06g01014 935 Pfam Cation transporter/ATPase, N-terminus 2 65 IPR004014 -
Bma06g01014 935 PRINTS H+-transporting ATPase (proton pump) signature 429 447 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01014 935 PRINTS H+-transporting ATPase (proton pump) signature 603 628 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01014 935 PRINTS H+-transporting ATPase (proton pump) signature 544 560 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01014 935 PRINTS H+-transporting ATPase (proton pump) signature 744 765 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01014 935 PRINTS H+-transporting ATPase (proton pump) signature 572 588 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01014 935 PRINTS P-type cation-transporting ATPase superfamily signature 163 177 - -
Bma06g01014 935 PRINTS P-type cation-transporting ATPase superfamily signature 489 499 - -
Bma06g01014 935 PRINTS P-type cation-transporting ATPase superfamily signature 467 478 - -
Bma06g01014 935 PRINTS P-type cation-transporting ATPase superfamily signature 313 327 - -
Bma06g01014 935 PRINTS P-type cation-transporting ATPase superfamily signature 595 607 - -
Bma06g01014 935 PRINTS P-type cation-transporting ATPase superfamily signature 572 591 - -
Bma06g01014 935 Pfam haloacid dehalogenase-like hydrolase 309 586 - -
Bma06g01014 935 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 85 333 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01014 935 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 547 661 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01014 935 PANTHER CALCIUM-TRANSPORTING ATPASE 1 915 - -
Bma06g01014 935 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Bma06g01014 935 SUPERFAMILY HAD-like 309 619 IPR036412 -
Bma06g01014 935 SUPERFAMILY Calcium ATPase, transduction domain A 116 213 IPR008250 -
Bma06g01014 935 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 18 790 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma06g01014 935 Gene3D - 116 200 - -
Bma06g01014 935 Gene3D - 884 935 - -
Bma06g01014 935 SFLD p-type atpase 295 623 IPR044492 -
Bma06g01014 935 ProSitePatterns E1-E2 ATPases phosphorylation site. 315 321 IPR018303 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02129 Bma-Chr1:77782617 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma02g00051 Bma-Chr2:455665 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma02g00062 Bma-Chr2:498185 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma03g00810 Bma-Chr3:7534030 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma04g00037 Bma-Chr4:382787 Bma06g01014 Bma-Chr6:46708766 1.62E-47 dispersed
Bma06g00187 Bma-Chr6:2314396 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma06g01014 Bma-Chr6:46708766 Bma13g01188 Bma-Chr13:45155670 0 dispersed
Bma07g00693 Bma-Chr7:14786593 Bma06g01014 Bma-Chr6:46708766 0 transposed
Bma01g00382 Bma-Chr1:3148232 Bma06g01014 Bma-Chr6:46708766 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01014 K01535 - tcc:18589272 1665.59