Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g01018 | ATGGCGGAAGAAAAGAAGAAGACAGGAAGCAAGTTACAGAAAAGCTACTTTGATGTGCTTGGAATTTGCTGTTCGTCAGAAGTTGGTCTGATAGAAAACATTTTGAAGCCACTGGATGGAATCAAAGAAATATCTGTCATAGTCCCAACAAGAACAGTGATTGTTCTTCATGATTCCATGGTTATATCCCAGATTCAAATAGCTAAAGCATTAAACCAAGCAAGGTTAGAAGCAAATGTGAGATTAAATGGAGAAGAAAACTACAAGAAGAAATGGCCGAGTCCTTATGCAATTATAAGTGGTTCCTTGCTTTTACTTTCTCTTCTTAAATATGTATACCGTCCACTCCAATGGCTTCCTCTTGGTGCCGTTGCCTTGGGGATCATCCCGATTGCCTTGAAAGCTACTGCTTCGATTCGTAATTTCCGGCTCGACATCAACATTCTCATTATTATTGCAGTGATTGGGACGATAGCCATGAACGACTATTTGGAAGCTGGAATCATTGTCTTCCTTTTCACCATAGCTGAATGGCTTGAGTCAAGGGCAAGCCACAAGGCCAAGGCCGTGATGTCTTCATTGATGAACATAGCTCCTCAGAATGCAGTCATAGCCGAGACTGGGGAGATGGTCGACGCGGGGGAAGTGAAGATAAACACAATCATAGCCATTAAGGCCGGAGAAATCGTACCAATCGATGGCATCGTAGTTGCTGGAAAATGTGACGTCGACGAGAAAAATTTAACCGGAGAGTCTTTCCCAGTTGCCAAACAGAAGGATTCATCTGTTTGGGCAGGAACCATCAATCTAAATGGGTATGTTAGTGTTAAAACCACTGCTCTAGCTGAAGATTGTGTGGTGGCTAAGATGGCGAAGCTTGTTGAAGAGGCACAGAACAACAAGTCTAGCACCCAGAAATTCATTGATAAGTGCACGAAATTTTACACGCCGGCCGTTATAGTTGTGTCTGCAAGTTTAGCAGTGGTTCCGGCAGCATTACAAGTCAACAACACTAATCATTGGTTTCATTTGGCACTAGTCGTGTTAGTAAGTGCTTGTCCGTGTGCGCTTATTCTTTCAACACCTGTCGCGACATTTTGTGCTCTCACGATGGCGGCTAAGTCCGGTCTCCTAATCAAGGGTGGAGATTTTCTCGAAACTCTGGCAAAAGTCAAGGTCATCGCCTTCGATAAAACCGGAACCATCACACGGGGCAAATTCGTCGTTACCGATTGTCAAGTTCTTCAATTTGATATTGACATGAACATGTTTGTTTATTGGGTTACGAGCATCGAAAGCAAATCGAGCCATCCGTTGGCAGCTGCCCTTATCGACTACGGACGCTTGCATTCCATCAATTGTAAACCTGAAAATGTTGAGAAGTTCGAAAACTTTCCGGGAGAAGGAGTGTATGGAAAAATAGATGGTAAAGAATTCTATATTGGGAGTAGAAAAATTGCTACAAGAGCCGGATGTCCGACAGTTCCTAGCAGAGAACATGTGACGGAAGGGAAGAGTATCGGATATGTATTTTGCGAAGGAGAACTACTTGGAAAATTCAGTCTGTCCGATAAATGTCGATCCGGCGTAGAGGAGGCGATCACCGAGATCAAATCTTTAGGTATTAAGACAGTCATGCTTACCGGCGATTCTACCGCAGCAGCCATGCATGTTCAACAACAGCTGAGAAGTGTTCTAGAGGAAGTACATGGAGAGCTTCTGCCAGAAGACAAGGCCAAAATGATAAGGAGGTTCAAGAAAGAAGGTCCAACAGCCATGGTCGGAGATGGAATAAACGATGCTCCAGCTCTAGCGACGGCCGACATTGGAATTTCTATGGGGATTTCAGGATCAGCACTCGCAAACGAAACAGGAAACGTAATTTTGATGTCGAACGACGTACGAAAAGTGGGGAAGGCCATAAAAATAGCAAGAAAATGCAGGAGAAAAGTAGTGGAAAATGTGGTTTTGTCTTTCATTACAAAAGCAGCTATTTTGGGGCTTGGATTTGCAGGTCATCCATTGATATGGGCTGCAGTTTTAGCAGATGTAGGAACTTGTTTAATGGTCACCTTGAACAGTATGTTGCTGCTCAAAGGTGTAGATGGGACTTCTGATCATCATCATCACCATAAAGGAAATAGCCATTGTTGTTCCAAAAAAGCTTCTGTGATTGAGAAATGTGCAGGAAGTGATGAAGAAAATCATTGCCATGGGAAAGCTCACAAAATGGACAACAATGGTGGTTTGGAGAGCGGTGGAGGTGGGTCTTCTGATCAGCATCATCACCATAAGGGAAACAGCCATTGTTGTTCCAAGAAAGCTTCTGTGGTCCAGAAATGTGCAGGAAGTGGTGAGGAAAATCACTGCCATGGAAAAGCTCATAAAATTGACAACAGTGGCGGTTTGGAGTGTTGCAGAGAAGAAAATGGAGAAAACCCAGATGGTAAAAGAGGTTGTTGCGTTGAAAAAGATGAGTTTGAGAAAAATCCCCATAGCAATTGCTGTTCAAAAAGAGCTTCTCAACAATGTACCGGAAAAGGTGAGGTTGGGGAAAGAAAGCACTGTCATGAAGCTCTGAAAATGGACAACAATGGCGGTTTGGAATTATTGAGAGAAACAAATGGAGAACACCCAGATGAAAAAATTAGCTGTTGCGTTCAAAAAGATGCGATTCAGACAAATCGCAGGCCATTGTTGTTCAAAGAGAGCTTCTGA | 2718 | 43.27 | MAEEKKKTGSKLQKSYFDVLGICCSSEVGLIENILKPLDGIKEISVIVPTRTVIVLHDSMVISQIQIAKALNQARLEANVRLNGEENYKKKWPSPYAIISGSLLLLSLLKYVYRPLQWLPLGAVALGIIPIALKATASIRNFRLDINILIIIAVIGTIAMNDYLEAGIIVFLFTIAEWLESRASHKAKAVMSSLMNIAPQNAVIAETGEMVDAGEVKINTIIAIKAGEIVPIDGIVVAGKCDVDEKNLTGESFPVAKQKDSSVWAGTINLNGYVSVKTTALAEDCVVAKMAKLVEEAQNNKSSTQKFIDKCTKFYTPAVIVVSASLAVVPAALQVNNTNHWFHLALVVLVSACPCALILSTPVATFCALTMAAKSGLLIKGGDFLETLAKVKVIAFDKTGTITRGKFVVTDCQVLQFDIDMNMFVYWVTSIESKSSHPLAAALIDYGRLHSINCKPENVEKFENFPGEGVYGKIDGKEFYIGSRKIATRAGCPTVPSREHVTEGKSIGYVFCEGELLGKFSLSDKCRSGVEEAITEIKSLGIKTVMLTGDSTAAAMHVQQQLRSVLEEVHGELLPEDKAKMIRRFKKEGPTAMVGDGINDAPALATADIGISMGISGSALANETGNVILMSNDVRKVGKAIKIARKCRRKVVENVVLSFITKAAILGLGFAGHPLIWAAVLADVGTCLMVTLNSMLLLKGVDGTSDHHHHHKGNSHCCSKKASVIEKCAGSDEENHCHGKAHKMDNNGGLESGGGGSSDQHHHHKGNSHCCSKKASVVQKCAGSGEENHCHGKAHKIDNSGGLECCREENGENPDGKRGCCVEKDEFEKNPHSNCCSKRASQQCTGKGEVGERKHCHEALKMDNNGGLELLRETNGEHPDEKISCCVQKDAIQTNRRPLLFKESF | 905 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 46805334 | 46810907 | + | Bma024103.1 | Bma06g01018 | 84520 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g01018 | 905 | SFLD | Haloacid Dehalogenase | 378 | 646 | - | - | |
Bma06g01018 | 905 | TIGRFAM | ATPase-IB2_Cd: cadmium-translocating P-type ATPase | 146 | 485 | - | - | |
Bma06g01018 | 905 | ProSiteProfiles | Heavy-metal-associated domain profile. | 14 | 80 | IPR006121 | GO:0046872 | |
Bma06g01018 | 905 | SUPERFAMILY | Calcium ATPase, transduction domain A | 209 | 294 | IPR008250 | - | |
Bma06g01018 | 905 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 3 | 845 | - | - | |
Bma06g01018 | 905 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 397 | 403 | IPR018303 | - | |
Bma06g01018 | 905 | Gene3D | - | 386 | 645 | IPR023214 | - | |
Bma06g01018 | 905 | SUPERFAMILY | HAD-like | 393 | 695 | IPR036412 | - | |
Bma06g01018 | 905 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED | 3 | 845 | - | - | |
Bma06g01018 | 905 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 169 | 669 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma06g01018 | 905 | PRINTS | P-type cation-transporting ATPase superfamily signature | 244 | 258 | - | - | |
Bma06g01018 | 905 | PRINTS | P-type cation-transporting ATPase superfamily signature | 594 | 613 | - | - | |
Bma06g01018 | 905 | PRINTS | P-type cation-transporting ATPase superfamily signature | 618 | 630 | - | - | |
Bma06g01018 | 905 | PRINTS | P-type cation-transporting ATPase superfamily signature | 395 | 409 | - | - | |
Bma06g01018 | 905 | PRINTS | P-type cation-transporting ATPase superfamily signature | 540 | 550 | - | - | |
Bma06g01018 | 905 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 146 | 670 | IPR023298 | - | |
Bma06g01018 | 905 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 146 | 697 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bma06g01018 | 905 | CDD | HMA | 17 | 78 | IPR006121 | GO:0046872 | |
Bma06g01018 | 905 | Gene3D | - | 183 | 298 | - | - | |
Bma06g01018 | 905 | SFLD | p-type atpase | 378 | 646 | IPR044492 | - | |
Bma06g01018 | 905 | PRINTS | Cadmium-transporting ATPase signature | 260 | 276 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bma06g01018 | 905 | PRINTS | Cadmium-transporting ATPase signature | 28 | 49 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bma06g01018 | 905 | PRINTS | Cadmium-transporting ATPase signature | 279 | 293 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bma06g01018 | 905 | PRINTS | Cadmium-transporting ATPase signature | 181 | 201 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Bma06g01018 | 905 | CDD | P-type_ATPase_HM | 96 | 696 | - | - | |
Bma06g01018 | 905 | SUPERFAMILY | HMA, heavy metal-associated domain | 10 | 79 | IPR036163 | GO:0046872 | |
Bma06g01018 | 905 | Gene3D | - | 406 | 526 | IPR023299 | GO:0000166 | |
Bma06g01018 | 905 | Pfam | E1-E2 ATPase | 206 | 374 | - | - | |
Bma06g01018 | 905 | Gene3D | - | 9 | 82 | - | - | |
Bma06g01018 | 905 | MobiDBLite | consensus disorder prediction | 739 | 761 | - | - | |
Bma06g01018 | 905 | Pfam | haloacid dehalogenase-like hydrolase | 391 | 608 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g01018 | Bma-Chr6:46805334 | Bma07g00880 | Bma-Chr7:30132494 | 1.38E-79 | dispersed | |
Bma06g01018 | Bma-Chr6:46805334 | Bma01g02192 | Bma-Chr1:78803560 | 2.81E-37 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g01018 | K01534 | - | jre:109019139 | 1037.33 |