Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01018 ATGGCGGAAGAAAAGAAGAAGACAGGAAGCAAGTTACAGAAAAGCTACTTTGATGTGCTTGGAATTTGCTGTTCGTCAGAAGTTGGTCTGATAGAAAACATTTTGAAGCCACTGGATGGAATCAAAGAAATATCTGTCATAGTCCCAACAAGAACAGTGATTGTTCTTCATGATTCCATGGTTATATCCCAGATTCAAATAGCTAAAGCATTAAACCAAGCAAGGTTAGAAGCAAATGTGAGATTAAATGGAGAAGAAAACTACAAGAAGAAATGGCCGAGTCCTTATGCAATTATAAGTGGTTCCTTGCTTTTACTTTCTCTTCTTAAATATGTATACCGTCCACTCCAATGGCTTCCTCTTGGTGCCGTTGCCTTGGGGATCATCCCGATTGCCTTGAAAGCTACTGCTTCGATTCGTAATTTCCGGCTCGACATCAACATTCTCATTATTATTGCAGTGATTGGGACGATAGCCATGAACGACTATTTGGAAGCTGGAATCATTGTCTTCCTTTTCACCATAGCTGAATGGCTTGAGTCAAGGGCAAGCCACAAGGCCAAGGCCGTGATGTCTTCATTGATGAACATAGCTCCTCAGAATGCAGTCATAGCCGAGACTGGGGAGATGGTCGACGCGGGGGAAGTGAAGATAAACACAATCATAGCCATTAAGGCCGGAGAAATCGTACCAATCGATGGCATCGTAGTTGCTGGAAAATGTGACGTCGACGAGAAAAATTTAACCGGAGAGTCTTTCCCAGTTGCCAAACAGAAGGATTCATCTGTTTGGGCAGGAACCATCAATCTAAATGGGTATGTTAGTGTTAAAACCACTGCTCTAGCTGAAGATTGTGTGGTGGCTAAGATGGCGAAGCTTGTTGAAGAGGCACAGAACAACAAGTCTAGCACCCAGAAATTCATTGATAAGTGCACGAAATTTTACACGCCGGCCGTTATAGTTGTGTCTGCAAGTTTAGCAGTGGTTCCGGCAGCATTACAAGTCAACAACACTAATCATTGGTTTCATTTGGCACTAGTCGTGTTAGTAAGTGCTTGTCCGTGTGCGCTTATTCTTTCAACACCTGTCGCGACATTTTGTGCTCTCACGATGGCGGCTAAGTCCGGTCTCCTAATCAAGGGTGGAGATTTTCTCGAAACTCTGGCAAAAGTCAAGGTCATCGCCTTCGATAAAACCGGAACCATCACACGGGGCAAATTCGTCGTTACCGATTGTCAAGTTCTTCAATTTGATATTGACATGAACATGTTTGTTTATTGGGTTACGAGCATCGAAAGCAAATCGAGCCATCCGTTGGCAGCTGCCCTTATCGACTACGGACGCTTGCATTCCATCAATTGTAAACCTGAAAATGTTGAGAAGTTCGAAAACTTTCCGGGAGAAGGAGTGTATGGAAAAATAGATGGTAAAGAATTCTATATTGGGAGTAGAAAAATTGCTACAAGAGCCGGATGTCCGACAGTTCCTAGCAGAGAACATGTGACGGAAGGGAAGAGTATCGGATATGTATTTTGCGAAGGAGAACTACTTGGAAAATTCAGTCTGTCCGATAAATGTCGATCCGGCGTAGAGGAGGCGATCACCGAGATCAAATCTTTAGGTATTAAGACAGTCATGCTTACCGGCGATTCTACCGCAGCAGCCATGCATGTTCAACAACAGCTGAGAAGTGTTCTAGAGGAAGTACATGGAGAGCTTCTGCCAGAAGACAAGGCCAAAATGATAAGGAGGTTCAAGAAAGAAGGTCCAACAGCCATGGTCGGAGATGGAATAAACGATGCTCCAGCTCTAGCGACGGCCGACATTGGAATTTCTATGGGGATTTCAGGATCAGCACTCGCAAACGAAACAGGAAACGTAATTTTGATGTCGAACGACGTACGAAAAGTGGGGAAGGCCATAAAAATAGCAAGAAAATGCAGGAGAAAAGTAGTGGAAAATGTGGTTTTGTCTTTCATTACAAAAGCAGCTATTTTGGGGCTTGGATTTGCAGGTCATCCATTGATATGGGCTGCAGTTTTAGCAGATGTAGGAACTTGTTTAATGGTCACCTTGAACAGTATGTTGCTGCTCAAAGGTGTAGATGGGACTTCTGATCATCATCATCACCATAAAGGAAATAGCCATTGTTGTTCCAAAAAAGCTTCTGTGATTGAGAAATGTGCAGGAAGTGATGAAGAAAATCATTGCCATGGGAAAGCTCACAAAATGGACAACAATGGTGGTTTGGAGAGCGGTGGAGGTGGGTCTTCTGATCAGCATCATCACCATAAGGGAAACAGCCATTGTTGTTCCAAGAAAGCTTCTGTGGTCCAGAAATGTGCAGGAAGTGGTGAGGAAAATCACTGCCATGGAAAAGCTCATAAAATTGACAACAGTGGCGGTTTGGAGTGTTGCAGAGAAGAAAATGGAGAAAACCCAGATGGTAAAAGAGGTTGTTGCGTTGAAAAAGATGAGTTTGAGAAAAATCCCCATAGCAATTGCTGTTCAAAAAGAGCTTCTCAACAATGTACCGGAAAAGGTGAGGTTGGGGAAAGAAAGCACTGTCATGAAGCTCTGAAAATGGACAACAATGGCGGTTTGGAATTATTGAGAGAAACAAATGGAGAACACCCAGATGAAAAAATTAGCTGTTGCGTTCAAAAAGATGCGATTCAGACAAATCGCAGGCCATTGTTGTTCAAAGAGAGCTTCTGA 2718 43.27 MAEEKKKTGSKLQKSYFDVLGICCSSEVGLIENILKPLDGIKEISVIVPTRTVIVLHDSMVISQIQIAKALNQARLEANVRLNGEENYKKKWPSPYAIISGSLLLLSLLKYVYRPLQWLPLGAVALGIIPIALKATASIRNFRLDINILIIIAVIGTIAMNDYLEAGIIVFLFTIAEWLESRASHKAKAVMSSLMNIAPQNAVIAETGEMVDAGEVKINTIIAIKAGEIVPIDGIVVAGKCDVDEKNLTGESFPVAKQKDSSVWAGTINLNGYVSVKTTALAEDCVVAKMAKLVEEAQNNKSSTQKFIDKCTKFYTPAVIVVSASLAVVPAALQVNNTNHWFHLALVVLVSACPCALILSTPVATFCALTMAAKSGLLIKGGDFLETLAKVKVIAFDKTGTITRGKFVVTDCQVLQFDIDMNMFVYWVTSIESKSSHPLAAALIDYGRLHSINCKPENVEKFENFPGEGVYGKIDGKEFYIGSRKIATRAGCPTVPSREHVTEGKSIGYVFCEGELLGKFSLSDKCRSGVEEAITEIKSLGIKTVMLTGDSTAAAMHVQQQLRSVLEEVHGELLPEDKAKMIRRFKKEGPTAMVGDGINDAPALATADIGISMGISGSALANETGNVILMSNDVRKVGKAIKIARKCRRKVVENVVLSFITKAAILGLGFAGHPLIWAAVLADVGTCLMVTLNSMLLLKGVDGTSDHHHHHKGNSHCCSKKASVIEKCAGSDEENHCHGKAHKMDNNGGLESGGGGSSDQHHHHKGNSHCCSKKASVVQKCAGSGEENHCHGKAHKIDNSGGLECCREENGENPDGKRGCCVEKDEFEKNPHSNCCSKRASQQCTGKGEVGERKHCHEALKMDNNGGLELLRETNGEHPDEKISCCVQKDAIQTNRRPLLFKESF 905
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46805334 46810907 + Bma024103.1 Bma06g01018 84520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01018 905 SFLD Haloacid Dehalogenase 378 646 - -
Bma06g01018 905 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 146 485 - -
Bma06g01018 905 ProSiteProfiles Heavy-metal-associated domain profile. 14 80 IPR006121 GO:0046872
Bma06g01018 905 SUPERFAMILY Calcium ATPase, transduction domain A 209 294 IPR008250 -
Bma06g01018 905 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 845 - -
Bma06g01018 905 ProSitePatterns E1-E2 ATPases phosphorylation site. 397 403 IPR018303 -
Bma06g01018 905 Gene3D - 386 645 IPR023214 -
Bma06g01018 905 SUPERFAMILY HAD-like 393 695 IPR036412 -
Bma06g01018 905 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 3 845 - -
Bma06g01018 905 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 169 669 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01018 905 PRINTS P-type cation-transporting ATPase superfamily signature 244 258 - -
Bma06g01018 905 PRINTS P-type cation-transporting ATPase superfamily signature 594 613 - -
Bma06g01018 905 PRINTS P-type cation-transporting ATPase superfamily signature 618 630 - -
Bma06g01018 905 PRINTS P-type cation-transporting ATPase superfamily signature 395 409 - -
Bma06g01018 905 PRINTS P-type cation-transporting ATPase superfamily signature 540 550 - -
Bma06g01018 905 SUPERFAMILY Calcium ATPase, transmembrane domain M 146 670 IPR023298 -
Bma06g01018 905 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 146 697 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bma06g01018 905 CDD HMA 17 78 IPR006121 GO:0046872
Bma06g01018 905 Gene3D - 183 298 - -
Bma06g01018 905 SFLD p-type atpase 378 646 IPR044492 -
Bma06g01018 905 PRINTS Cadmium-transporting ATPase signature 260 276 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bma06g01018 905 PRINTS Cadmium-transporting ATPase signature 28 49 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bma06g01018 905 PRINTS Cadmium-transporting ATPase signature 279 293 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bma06g01018 905 PRINTS Cadmium-transporting ATPase signature 181 201 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bma06g01018 905 CDD P-type_ATPase_HM 96 696 - -
Bma06g01018 905 SUPERFAMILY HMA, heavy metal-associated domain 10 79 IPR036163 GO:0046872
Bma06g01018 905 Gene3D - 406 526 IPR023299 GO:0000166
Bma06g01018 905 Pfam E1-E2 ATPase 206 374 - -
Bma06g01018 905 Gene3D - 9 82 - -
Bma06g01018 905 MobiDBLite consensus disorder prediction 739 761 - -
Bma06g01018 905 Pfam haloacid dehalogenase-like hydrolase 391 608 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01018 Bma-Chr6:46805334 Bma07g00880 Bma-Chr7:30132494 1.38E-79 dispersed
Bma06g01018 Bma-Chr6:46805334 Bma01g02192 Bma-Chr1:78803560 2.81E-37 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01018 K01534 - jre:109019139 1037.33