Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01023 ATGGCAGTGATGATACTGGAATTCGGGCTTGTGGCTATAGTATTCTTTACCTTCTTAGTTGTTGGGAAGGCTGAGGTTTACATAGTCACAGTTGAAGGAGAGCCAGTGACGAGTTACCAAGGTGGGGTGAATGGTTTTGAAGCGACAGCTGTGGAATCTGATGAAAGAATTGATACTACCAGTGAATTGGTGATATCTTATGCTCATCACTTAGAAAGGAAACATGATATGCTTCTTGGGATGTTGTTCGAGAGTGGGACCTATAAGAAACTATACAGTTATCGGCATCTCATCAATGGATTTGCTGTTCATATTACACCTGAACAGGCAGAAACCCTAAGACGCACTCCAAGTGTTAAATCTGTGGTAAGAGACTGGAAGGTGAGGAGACTTACCACGCACACCCCTCAATTTTTGGGTCTTCCAACCGAGGTATGGCCTACAGGAGGTGGTTTTGACAGAGCTGGAGAGGACATTGTGATAGGATTTGTGGATTCGGGTATCTATCCACATCATCCAAGTTTTGCAACCTACAATACTGAACCATACGGACCTGTTGGAAAGTATCGTGGTAAATGTGAAGTTGACCTTGACACTAAAAAAGACTTCTGTAATGGGAAAATTGTTGGAGCTCAACATTTTGCTGAAGCGGCTAAAGCAGTTGGCGCATTTAATCCTTCTGTTGATTTTGCATCTCCTTTGGATGGGGATGGACATGGAAGTCATACAGCAGCTATTGCAGCTGGAAATAATGGAATACCTGTGAGAATGCATGGTTACGAATTTGGAAAAGCTAGTGGCATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCACTCTACAGGCTCTTTGGTGGATTTGTTGCGGATGTAGTGGCTGCTATTGATCAGGCTGTACACGATGGTGTTGATATACTCAGTCTCTCAGTGGGACCTAACAGTCCCCCAGCAACCACCAAAACCACATTTTTAAACCCTTTTGATGCTACCCTTCTTTCAGCAGTGAAGGCAGGGGTATTCGTTGCACAGGCAGCTGGAAATGGAGGTCCTTTCCCCAAATCTTTGGTTTCCTATAGCCCTTGGATAACATCCGTTGCTGCAGCAATTGATGACCGGAGATACAAAAATCATCTGACCCTTGGAAATGGAAAAATATTATCTGGGATTGGTTTATCACCTTCTACTCATTTAAATCAAACGTATACCTTGGTAGCAGCAAATGACGTGTTGCTAGATTCTTCAGTAGTGAAGTTCAGCCCATCCGACTGTCAGAGACCTGAAGTTCTAAATAAGAACTTGGTTGAAGGAAACATCCTACTTTGTGGTTACTCCTTCAATTTTGCTGCTGGTACAGCATCTATTAAGAAAGTATCAGAAACAGCTAGGAGTCTTGGTGCAGTTGGCTTTGTCCTTGCTGTAGAAAATGTTTCTCCAGGAGCAAAATTTGATCCTGTTCCTAGCGGTCTTCCTGGAATACTAATCACAAATGTTAGCAAGTCAATGGATCTCATTGATTATTACAACACCTCTACGTCAAGAGATTGGACTGGAAGAGTGAAAAGCTTCAAAGCTGTAGGTAGAATAGGGGATGGTTTGATGCCTATACTATACAAATCAGCTCCACAGGTGGCATTATTTTCAGCTCGAGGTCCTAATATAAGAGATTTTAACTTCCAAGATGCTGACCTTCTAAAACCAGATATTCTGGCTCCTGGTTCTCTCATTTGGGCTGCTTGGTCTCCAAATGGAACAGATGAGCCTAACTATGTCGGTGAGAGATTTGCGATGATTTCTGGAACTAGCATGGCGGCTCCACACATAGCTGGAATAGCAGCTCTTATAAAACAGAAGCACCCTGATTGGAGCCCTGCTGCTATTAAATCAGCTCTGATGACAACGTCAACAAAAATTGACAGAGCTGGAAGACCTCTTGAAGCACAGCAATATTCTGAATCGGAGACAGTGAGTTTGGTTATTGCTACACCTTTTGATTACGGAAGCGGTCATGTAAATCCGAGTGCTGCTTTGAATCCTGGTCTCATCTTCGATGCAGGTTACGAGGATTACCTGGGATTTCTATGCACAACACCCGGAATTGATGTTCACGAGATAATGAACTACACAAGCACACCCTGTAACTTCACCATGCGCCACCCTTCAAACCTCAACAGTCCATCAATCACTATCTCCCATCTTGTGGGAACTCAGACCGTCACTCGGACCGTAACGAATGTCGACGAGGAAGAAACTTACGTAATCTCTCCAAGAATGGATCCTTCCATTGCAATTGAAACATATCCTCCAATCATGACTCTTACGCCTGGTTTCTCACGAAAATTCTCCGTCACTCTCACAGTTCGATCGGTCACCGGCTCGTATTCTTTTGGCGAGGTTATGCTCAAAGGCAGCAGAGGACACCAGGTGAGAATTCCTGTTGTAGTAATGGGATATCCAAGATAA 2460 43.9 MAVMILEFGLVAIVFFTFLVVGKAEVYIVTVEGEPVTSYQGGVNGFEATAVESDERIDTTSELVISYAHHLERKHDMLLGMLFESGTYKKLYSYRHLINGFAVHITPEQAETLRRTPSVKSVVRDWKVRRLTTHTPQFLGLPTEVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATYNTEPYGPVGKYRGKCEVDLDTKKDFCNGKIVGAQHFAEAAKAVGAFNPSVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDATLLSAVKAGVFVAQAAGNGGPFPKSLVSYSPWITSVAAAIDDRRYKNHLTLGNGKILSGIGLSPSTHLNQTYTLVAANDVLLDSSVVKFSPSDCQRPEVLNKNLVEGNILLCGYSFNFAAGTASIKKVSETARSLGAVGFVLAVENVSPGAKFDPVPSGLPGILITNVSKSMDLIDYYNTSTSRDWTGRVKSFKAVGRIGDGLMPILYKSAPQVALFSARGPNIRDFNFQDADLLKPDILAPGSLIWAAWSPNGTDEPNYVGERFAMISGTSMAAPHIAGIAALIKQKHPDWSPAAIKSALMTTSTKIDRAGRPLEAQQYSESETVSLVIATPFDYGSGHVNPSAALNPGLIFDAGYEDYLGFLCTTPGIDVHEIMNYTSTPCNFTMRHPSNLNSPSITISHLVGTQTVTRTVTNVDEEETYVISPRMDPSIAIETYPPIMTLTPGFSRKFSVTLTVRSVTGSYSFGEVMLKGSRGHQVRIPVVVMGYPR 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46887749 46894731 + Bma024110.1 Bma06g01023 84525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01023 819 CDD Peptidases_S8_3 132 635 IPR034197 -
Bma06g01023 819 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 161 172 IPR023827 -
Bma06g01023 819 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 818 IPR045051 -
Bma06g01023 819 Gene3D Peptidase S8/S53 domain 158 689 IPR036852 GO:0004252|GO:0006508
Bma06g01023 819 Pfam Fibronectin type-III domain 721 814 IPR041469 -
Bma06g01023 819 ProSiteProfiles Serine proteases, subtilase domain profile. 125 676 - -
Bma06g01023 819 SUPERFAMILY Subtilisin-like 131 680 IPR036852 GO:0004252|GO:0006508
Bma06g01023 819 Pfam Subtilase family 156 637 IPR000209 GO:0006508|GO:0008236
Bma06g01023 819 PANTHER CUCUMISIN-RELATED 16 818 - -
Bma06g01023 819 Gene3D - 371 536 - -
Bma06g01023 819 SUPERFAMILY Protease propeptides/inhibitors 88 129 - -
Bma06g01023 819 Pfam Peptidase inhibitor I9 26 129 IPR010259 -
Bma06g01023 819 ProSitePatterns Serine proteases, subtilase family, serine active site. 599 609 IPR023828 -
Bma06g01023 819 CDD PA_subtilisin_like 378 516 - -
Bma06g01023 819 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Bma06g01023 819 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Bma06g01023 819 PRINTS Subtilisin serine protease family (S8) signature 598 614 IPR015500 -
Bma06g01023 819 Gene3D - 693 816 - -
Bma06g01023 819 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 130 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00871 Bma-Chr5:46325312 Bma06g01023 Bma-Chr6:46887749 2.44E-08 dispersed
Bma06g01023 Bma-Chr6:46887749 Bma11g00613 Bma-Chr11:9271603 1.85E-111 dispersed
Bma06g01023 Bma-Chr6:46887749 Bma06g01026 Bma-Chr6:46919350 0 proximal
Bma14g00888 Bma-Chr14:10053810 Bma06g01023 Bma-Chr6:46887749 0 transposed
Bma14g00912 Bma-Chr14:10286578 Bma06g01023 Bma-Chr6:46887749 0 transposed
Bma01g00394 Bma-Chr1:3251914 Bma06g01023 Bma-Chr6:46887749 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01023 - - qsu:111993119 1427.15