Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01032 ATGACTGGCGAGAGCAAGATCGTTCATAAACATGCAAAAGAACCGTTTCTGTTATCGGGCTGCAAAGTAGCGGATGGAAGTGGCACTATGCTGGTTACAAGCGTTGGCATTAATACTGAATGGGGATTGCTGATGGCTAGCATTTCTGATGACACGGGTGAGGAAACACCCTTGCAGGTCCGTTTGAATGGCGTTGCTACTTTTATTGGTATTGTGGGACTAACTGTAGCTTTTGCTGTCTTGATTGTTCTATTTGTCAGATATTTTACTGGACACACCACAAATGCAGACGGGCAAGTTCAATTTATTGCTGGCCAGACAAAGGCTGGCAAGGCCGTTGATGGGGCCATTAAAATCATTACTATTGCGGTCACAATTGTAGTTGTTGCGGTGCCGGAAGGGCTTCCCTTGGCTGTTACCTTAACTCTTGCCTACTCAATGAGAAAGATGATGGCAGACAAAGCATTGGTGCGAAGACTTTCTGCATGTGAGACTATGGGATCTGCTACAACTATATGTAGTGATAAGACTGGAACTTTGACAAAGAATGAGATGACCATTGTTGAAGCTTATGTTGGTGGAAAGAAAATTGATCCTCCAGATAACAAGTCTGAACTTTCATCCACGAGTTTATCTTTACTTCTTGAAGGAATTGCTCAGAATACGAATGGTAGTATTTATTTGCCTGAGGGCGGAGGAGATGTTGAGGTTTCTGGATCGCCAACAGAAAAAGCTATTCTCTCTTGGGGGATTAAGCTCGGGATGAGTTTTGAACTCACCAGATCAGAATCTTCAATTGTTCATGTTTTTCCATTCAACTCAGAGAAAAAGCGAGGTGGTGTTGCTGTGAGATTGCCCGACTCTCAAGCCCACATACATTGGAAAGGTGCTGCTGAGATAGTCCTGGCCTCGTGCACTCAACACATTGACCTTGATGGTTGTTTGGTGCCTATGGATGAAGATAAGAAAATGTTTTTCAAAAAAGCTATTGAGGATATGGCTGCTCGTACTCTGCGTTGTGTAGCCATTGCATATAGATCTTATGATATTGAGAAAATTCCCGCTGATGAAGAACAACTGACCAAGTGGGTGCTACCAGAGGATGAGCTTGTGTTGTTGGCTATTGTTGGTATAAAGGACCCTTGTCGACCTGGAGTGAAACATGCAGTAGAACTTTGTCAAATTGCTGGTGTCAAGGTACGTATGGTAACTGGTGACAACATTCAGACTGCCAAAGCTATTGCTTTAGAATGTGGCATACTTAGTTCAGATTCAGATGCTTACGAACCCAATATTATTGAGGGAAAAGCCTTTCGCGAACTATCTGATGAACAAAGAGAAGAAATTGCTGAAAAGATATCAGTGATGGGACGGTCCTCCCCCAATGATAAGCTTCTTCTTGTTCAAGCATTGCGAAAAAAGAGACACGTTGTTGCTGTAACTGGGGATGGAACTAATGATGCGCCTGCATTGCATGAGGCAGACATCGGTCTTGCAATGGGTATTCAAGGGACGGAAGTTGCAAAGGAAAGCTCAGATATTATTATCTTGGATGACGATTTTGCTTCTGTTGTGAAGGTTGTTAGGTGGGGCCGTTCAGTTTATGCGAATATTCAGAAGTTTATTCAGTTTCAGCTTACAGTTAATGTTGCTGCTCTTATTATTAATGTTGTTGCGGCAGTGTCTTCTGGGAATGTTCCACTAAACGCAGTGCAGCTTCTTTGGGTAAATCTTATCATGGATACTTTAGGAGCATTGGCATTAGCAACTGAACCACCAACAGATCATCTTATGCACAGGCCGCCTGTGGGAAGAAGTGAACCTCTTGTAACAAATATTATGTGGAGAAATTTGCTGATACAGGCCCTTTATCAAGTATCTGTGCTTCTTGTTCTCAACTTTGCGGGTATCCATTTACTTAATCTGGAACATGAAACGGTAACACGTGCTAACGAAGTGAAGAATACTCTGATATTCAATGCATTTGTCCTTTGTCAGATTTTCAATGAGGTCAACGCTCGGAAGCCTGATGAATTTAATGTTTTCAAAGGAATTACCAAAAATTATTTCTTCTTGGCGATAGTGGGTTTTACTCTAGTACTTCAGGTTATTATCATTATGTTTCTTGGGAAGTTTACTTCTACTGTCAGGCTTAGCTGGCAACTTTGGTTAGTTTCCATCGGTATTGGTGTTATCAGTTGGCCCCTTGCCGTCGTTGGAAAACTGATACCTGTTCCTGAAACTCCAATTCATAAATTCTTCACGAAACGGGTTCGGAGGCGAAGAAATTCGTAG 2295 42.27 MTGESKIVHKHAKEPFLLSGCKVADGSGTMLVTSVGINTEWGLLMASISDDTGEETPLQVRLNGVATFIGIVGLTVAFAVLIVLFVRYFTGHTTNADGQVQFIAGQTKAGKAVDGAIKIITIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTKNEMTIVEAYVGGKKIDPPDNKSELSSTSLSLLLEGIAQNTNGSIYLPEGGGDVEVSGSPTEKAILSWGIKLGMSFELTRSESSIVHVFPFNSEKKRGGVAVRLPDSQAHIHWKGAAEIVLASCTQHIDLDGCLVPMDEDKKMFFKKAIEDMAARTLRCVAIAYRSYDIEKIPADEEQLTKWVLPEDELVLLAIVGIKDPCRPGVKHAVELCQIAGVKVRMVTGDNIQTAKAIALECGILSSDSDAYEPNIIEGKAFRELSDEQREEIAEKISVMGRSSPNDKLLLVQALRKKRHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDDFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGNVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRSEPLVTNIMWRNLLIQALYQVSVLLVLNFAGIHLLNLEHETVTRANEVKNTLIFNAFVLCQIFNEVNARKPDEFNVFKGITKNYFFLAIVGFTLVLQVIIIMFLGKFTSTVRLSWQLWLVSIGIGVISWPLAVVGKLIPVPETPIHKFFTKRVRRRRNS 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47128388 47143229 + Bma024119.4 Bma06g01032 84534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01032 764 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 745 IPR023298 -
Bma06g01032 764 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 1 745 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bma06g01032 764 SFLD C1.7: P-type atpase like 155 533 - -
Bma06g01032 764 Gene3D - 170 526 IPR023214 -
Bma06g01032 764 PRINTS P-type cation-transporting ATPase superfamily signature 374 385 - -
Bma06g01032 764 PRINTS P-type cation-transporting ATPase superfamily signature 173 187 - -
Bma06g01032 764 PRINTS P-type cation-transporting ATPase superfamily signature 396 406 - -
Bma06g01032 764 PRINTS P-type cation-transporting ATPase superfamily signature 481 500 - -
Bma06g01032 764 PRINTS P-type cation-transporting ATPase superfamily signature 505 517 - -
Bma06g01032 764 SUPERFAMILY HAD-like 171 586 IPR036412 -
Bma06g01032 764 PANTHER CATION TRANSPORTING ATPASE 1 758 - -
Bma06g01032 764 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 180 378 IPR023299 GO:0000166
Bma06g01032 764 ProSitePatterns E1-E2 ATPases phosphorylation site. 175 181 IPR018303 -
Bma06g01032 764 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 113 204 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01032 764 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 447 563 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma06g01032 764 Pfam Cation transporting ATPase, C-terminus 566 743 IPR006068 -
Bma06g01032 764 Gene3D - 50 734 - -
Bma06g01032 764 Pfam E1-E2 ATPase 1 151 - -
Bma06g01032 764 PANTHER CALCIUM-TRANSPORTING ATPASE 1 758 - -
Bma06g01032 764 Pfam haloacid dehalogenase-like hydrolase 170 495 - -
Bma06g01032 764 Gene3D - 183 381 IPR023299 GO:0000166
Bma06g01032 764 SFLD p-type atpase 155 533 IPR044492 -
Bma06g01032 764 SUPERFAMILY Calcium ATPase, transduction domain A 1 46 IPR008250 -
Bma06g01032 764 Gene3D - 2 49 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01032 Bma-Chr6:47128388 Bma13g01184 Bma-Chr13:45120643 0 dispersed
Bma06g01032 Bma-Chr6:47128388 Bma04g00144 Bma-Chr4:1235599 0 transposed
Bma06g01032 Bma-Chr6:47128388 Bma01g02247 Bma-Chr1:79646522 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01032 K01537 - pop:7474716 1229.16