Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01034 TTATTGGGAACTGCCGTTGCTATTGATGGACCTACTAAGTCGGAAACAGTGATCGGAATCGATCTTGGAACAACTTATTCCTGTGTGGGAATCTATAAGAACGATCGCGTGGAGATCATAGCCAACGATCAAGGAAGCAGAATCACACCTTCATGGGTCGCCTTTACTGATAACGAGCGTCTGATTGGAGAGGCTGCGAGGAACCAAAGGGCTCTCAATCCAGAACGTACAATCTTTGATGTTAAGCGATTGATTGGAAGAAAGTTTGACGATCCAGTTGTTCAGAGAGATATGAAGTTTCTTCCTTATAATATCGTGAACAAGGATGAGAAACCTTACGTTGAGATTAAAGTTAAGGGTGAAACCAAGTTATTTAGCCCGGAAGAAATCAGTTCCATGGTTTTGCTTAAGATGAAAGAGACAGCGGAGGCTTATTTGGGCAAGAAAGTCACAGAAGCGGTTGTCACAGTTCCAGCTTATTTCAACGATGCTCAGAGGCAGGCTACTAAGGATGCAGGCGCCATTGCCGGGCTCAAGGTAGAGCGTATAATAAACGAACCTACAGCTGCAGCTCTCGCCTATGGTCTGGATGATCAGAGTGGAGAGAAGAACATTCTGGTTTATGATCTAGGAGGAGGTACATTTGATGTTAGCATTTTGTCTATTGATGGTGGTGTTTTTGAAGTTCTTGCAACCAATGGCGATACCCACTTGGGAGGAGAAGATTTTGATCACAAAGTAATGGATTATTTCATCGAACTGATCAAGAAAAAGTACAACAAAGACATAAGCAACGATAACAAAGCTCTGGGAAAGCTTCATCGAGAATGCGAGAGAGCGAAAAGGGCGTTGAGTAGCCAGCACCAAGTAAGAGTTGAAATCGAAGCTCTCTTTGAGGGAGTTGATTTCTCAGAGCCTTTGACAAGAGCAAGATTTGAGGATTTGAACATGGATTTGTTCAAGAAGACGATGCAACCGGTGAAGAAGGCGTTGGAAGATGCAGGGCTGGAGAAAAGCGAAATCGACGAAATTGTGCTCGTCGGAGGAAGCACTAGAATCCCGAAAATTCAGCAACTTTTGAAAGATTTTTTCGACGGGAAAGAGCCTAACAAGGGTGTCAACCCGGACGAAGCCGTCGCTTTTGGTGCTTCCGTTCAAGGAGGAATCCTCAGCGGCTCCGGCGGGACTAAAACAAATGGGGTTGTTTTGCTAGATGTTGCTTCTTTGAGTTTGGGTATCGAAACAGTCGGTGGAGTAATGACGAAATTGATTCCTAGAAACACTAACATCCCAACCAAGAAATCACAGGTTTTCACCACCTATCAAGATCAGCAACCCGCTGTTTCTATCCGGGTCTATGAAGGTGAAAGGAGCTTGACAAAGGATTGTCGCGAGCTCGGAAGATTCGATCTCTCAGGCATTCCACCCGCTCCCCGGGGTGTGCCTCAGATCGTCGTAACCTTCGAGGTCGATAAAAATGGAATTTTACAAGTGAAAGCCGAGGATAAGGCTGCGAAGAAATCACAAACGCTCACGATCACGAACGATAAAGGGCGACTAAGCAAAGAAGAGATCAATAGGATGGTGAAGGAGGCCGAAGAATTCGCCGAGGAAGACAAGAGAGCGAGAGAACGGATCGATTCTCGGAACAAGCTCGAGGCTTACATCTACAACATGAGAAGCAGCATTGGAGATAAAGACAAGCTTGGCGATAAGATTGAAGAAGAAGATAAGGAAATCATGGAGAGTGCACTTAAAGAAGCTCTTGAATGGGTTGATCGAAATCAAGATGCAGAGAGGGAGGATTTTGATGAAAGATTGAAGGAGGTTGAGGCAGTATGCAATCCCATCATCAAGAAAATTTATCAGAGCAATGGAGGAAGTTCTTCTGATTTGGAAGATGAAGATGAATCTCATAATGAATTATAG 1929 44.48 LLGTAVAIDGPTKSETVIGIDLGTTYSCVGIYKNDRVEIIANDQGSRITPSWVAFTDNERLIGEAARNQRALNPERTIFDVKRLIGRKFDDPVVQRDMKFLPYNIVNKDEKPYVEIKVKGETKLFSPEEISSMVLLKMKETAEAYLGKKVTEAVVTVPAYFNDAQRQATKDAGAIAGLKVERIINEPTAAALAYGLDDQSGEKNILVYDLGGGTFDVSILSIDGGVFEVLATNGDTHLGGEDFDHKVMDYFIELIKKKYNKDISNDNKALGKLHRECERAKRALSSQHQVRVEIEALFEGVDFSEPLTRARFEDLNMDLFKKTMQPVKKALEDAGLEKSEIDEIVLVGGSTRIPKIQQLLKDFFDGKEPNKGVNPDEAVAFGASVQGGILSGSGGTKTNGVVLLDVASLSLGIETVGGVMTKLIPRNTNIPTKKSQVFTTYQDQQPAVSIRVYEGERSLTKDCRELGRFDLSGIPPAPRGVPQIVVTFEVDKNGILQVKAEDKAAKKSQTLTITNDKGRLSKEEINRMVKEAEEFAEEDKRARERIDSRNKLEAYIYNMRSSIGDKDKLGDKIEEEDKEIMESALKEALEWVDRNQDAEREDFDERLKEVEAVCNPIIKKIYQSNGGSSSDLEDEDESHNEL 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47156609 47159210 + Bma024121.1 Bma06g01034 84536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01034 642 MobiDBLite consensus disorder prediction 622 642 - -
Bma06g01034 642 Gene3D - 550 624 IPR029048 -
Bma06g01034 642 PANTHER HEAT SHOCK PROTEIN 70KDA 9 630 IPR013126 GO:0005524|GO:0140662
Bma06g01034 642 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 547 628 IPR029048 -
Bma06g01034 642 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 553 IPR029047 -
Bma06g01034 642 ProSitePatterns Heat shock hsp70 proteins family signature 2. 207 220 IPR018181 -
Bma06g01034 642 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 396 549 IPR029047 -
Bma06g01034 642 SUPERFAMILY Actin-like ATPase domain 200 392 IPR043129 -
Bma06g01034 642 Coils Coil 581 601 - -
Bma06g01034 642 PRINTS 70kDa heat shock protein signature 400 419 - -
Bma06g01034 642 PRINTS 70kDa heat shock protein signature 153 173 - -
Bma06g01034 642 PRINTS 70kDa heat shock protein signature 341 357 - -
Bma06g01034 642 PRINTS 70kDa heat shock protein signature 213 223 - -
Bma06g01034 642 PRINTS 70kDa heat shock protein signature 373 393 - -
Bma06g01034 642 PRINTS 70kDa heat shock protein signature 44 56 - -
Bma06g01034 642 PRINTS 70kDa heat shock protein signature 481 497 - -
Bma06g01034 642 PRINTS 70kDa heat shock protein signature 16 29 - -
Bma06g01034 642 PRINTS 70kDa heat shock protein signature 66 74 - -
Bma06g01034 642 Coils Coil 525 545 - -
Bma06g01034 642 Gene3D Actin; Chain A, domain 4 239 322 - -
Bma06g01034 642 Gene3D - 199 373 - -
Bma06g01034 642 Pfam Hsp70 protein 17 623 IPR013126 GO:0005524|GO:0140662
Bma06g01034 642 ProSitePatterns Heat shock hsp70 proteins family signature 1. 20 27 IPR018181 -
Bma06g01034 642 CDD HSPA5-like_NBD 16 388 IPR042050 -
Bma06g01034 642 PANTHER LUMINAL-BINDING PROTEIN 9 630 - -
Bma06g01034 642 SUPERFAMILY Actin-like ATPase domain 16 197 IPR043129 -
Bma06g01034 642 ProSitePatterns Heat shock hsp70 proteins family signature 3. 344 358 IPR018181 -
Bma06g01034 642 Gene3D - 18 388 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01034 Bma-Chr6:47156609 Bma12g00262 Bma-Chr12:3458273 0 dispersed
Bma06g01034 Bma-Chr6:47156609 Bma01g01879 Bma-Chr1:69104163 0 transposed
Bma06g01034 Bma-Chr6:47156609 Bma10g00293 Bma-Chr10:2671676 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01034 K09490 - zju:107411863 1028.08