Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01038 AAAATCGAGGGTTCGCAGGCCACTGCCAGGCAGACTGCTGAGTTGCTTCGATCATTTATTTCACAACAGCGATTGCCCTACACTAATCAAGGTGGAGTTTTGATTGATGCTGTGAAGGCTGTTGGCGAGCAACTGATTAATGCAAATCCTGTTGAGCTTGCTGTTGGTAATATTGTGAGGCGTATTTTACACATTATTAGAGAGGAGGAATTATCTCTAGCTACGGCTGCTATTGGTGGTTTGTCTCTGTCGGTCGCCAGTGACGATGAAGTTGACATTGAGAGAGATGATCACCCAGCTCTTTCAGCCGCTGTTGTCGCTGCTGCTGCTAGAAACGCTTTACGTCCCCCTTCCTTGCAGACTCTTCTTGAAGATATCCCAGCTACAGTCGTTTCCCATAAGACTTCATCTGGGGGTGATTCTGAAGGAAAAGGCAAATCTGCCGATAAAAGTTCTAGAAGTCGCAAGTTGAAGCACGGTGTCATTGAAGCTGTCAATGAACTCATTCAAGATATCAACACTTGCCATGAACAAATAGCTGAGCAAGCAGTTGAACACATCCATCAAAATGAAGTTATATTGACCCTTGGAAGCTCCAGAACAGTATTGGAGTTTCTTTGTGCTGCAAATGAGAAGAAAAGATCTTTCCGAGTTTTTGTTGCAGAGGGTGCTCCAAGGTCATATAAGGGGCATCTTCTTGCAAAAGAACTATCTTCAAGGGGCTTACAAACCACACTTATAACTGATTCTGCGGTTTTTGCTATGATTTCTCGGGTGAACATGGTTATAGTTGGAGCACATGCCGTCATGACCAATGGTGGCGTAATAGTTCCTGTTGGATTAAATATGCTTGCACTTGCTGCTCAAAGGCACGCTGTTCCCTTTGTTGTACTTGCTGGAAGCCACAAGTTGTGTCCATTGTATCCACATAATCCTGAGGTTCTGCTCAATGAGCTTCGATCCCCATCTGAGCTTCTGGATTTTGGAGAATTTTCAGACTGCATGGATTTTAGAAGTGACACTGGTTCTCCTCTTCTTCATGTGGTCAATCCAACATTTGATTATGTGCCACCAAAACTCGTTAGTTTGTTTATTACAGACACTGGGGGACATAATCCATCATACATGTACCGGCTCATTGGTGATTATTACTCTCCTAAAGATCTAGTAGTACAACGG 1179 43.77 KIEGSQATARQTAELLRSFISQQRLPYTNQGGVLIDAVKAVGEQLINANPVELAVGNIVRRILHIIREEELSLATAAIGGLSLSVASDDEVDIERDDHPALSAAVVAAAARNALRPPSLQTLLEDIPATVVSHKTSSGGDSEGKGKSADKSSRSRKLKHGVIEAVNELIQDINTCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAANEKKRSFRVFVAEGAPRSYKGHLLAKELSSRGLQTTLITDSAVFAMISRVNMVIVGAHAVMTNGGVIVPVGLNMLALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFRSDTGSPLLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIGDYYSPKDLVVQR 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47213299 47223216 + Bma031310 Bma06g01038 84540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01038 393 SUPERFAMILY NagB/RpiA/CoA transferase-like 2 388 IPR037171 -
Bma06g01038 393 PANTHER BNAA01G32370D PROTEIN 35 391 - -
Bma06g01038 393 MobiDBLite consensus disorder prediction 139 157 - -
Bma06g01038 393 Pfam Initiation factor 2 subunit family 1 373 IPR000649 GO:0044237
Bma06g01038 393 MobiDBLite consensus disorder prediction 131 157 - -
Bma06g01038 393 Gene3D - 175 383 IPR042529 -
Bma06g01038 393 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 35 391 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01038 Bma-Chr6:47213299 Bma09g00997 Bma-Chr9:49489944 7.36E-21 dispersed
Bma07g00574 Bma-Chr7:8005725 Bma06g01038 Bma-Chr6:47213299 8.23E-16 transposed
Bma01g00403 Bma-Chr1:3357723 Bma06g01038 Bma-Chr6:47213299 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01038 K03754 - pvy:116109962 645.966