Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01043 ATGGAGGATAAAACATGTCAAGGTGAGACTAGCTTTGTGAAGTTGCCTGAGATCAGGTTTACGAAGCTCTTCATCAATGGAGAATTTGTGGATGCAGTTTCAGGGAAGACGATGGAGACAATTGATCCGAGAACAGGAGAGGTGATAGGAAGAGTGGCCGAAGGAGATAAAGAAGACGTTGATTTAGCCGTCGAGTCTGCAAGACGAGCCTTCGACCATGGCTCCTGGCCTCAACAATTTCCTAAATATTTCAATGATCAGGAAAGAGGAAGGATACTGCTAAAGCTAGCAGATTTGATAGAAGAACATGCAGAAGAATTAGCTACTTTAGACGCCATTGATGCTGGAAAATTGTTCAAAATGTGCATGGCATTGGACGTTCCTCACGTGGCCCAAATTCTCCGTTACTACGCCGGAGCCGCCGATAAAGTTTCGGGCGAGGTGCTCAAAATGTCGGGGGAGTTTCACGGCTACACTTTGCTAGAGCCGATCGGAGTGGTCGGCCTCATCATTCCGTGGAATTTTCCGATGCTCTTCTTCTTTCTGAAGATCAGTCCCGCCCTCGCCGCAGGTTGCACTGTCGTGGTAAAGCCGGCCGAGCAGACGCCTCTCTCCGCTCTATATTGTGCTCATCTTGCAAAACTGGCTGGAGTGCCCGACGGAGTACTGAATGTTGTAACTGGGTTTGGACCGACGGCCGGAGCTGCAGTCAGCTCTCACATGGAGATTGATGCAGTGAGTTTCACTGGATCTACCGTTGTTGGGCGTAAAATACTGGAAGCAGCAGCAAAAAGCAACCTGAAGACAGTGACCCTAGAGCTAGGAGGAAAGTCGCCCCTCATTATTTTTGACGATGCTGATGCAGACAAGGCTGCAGACATGGCTTTGCTCGGCATTCTTTTCAACAAGGGGGAGATTTGTGTTGCTGGGTCTAGAGTACTTGTCCAAGAAGGCATTTATGATCAAGTTGTGGAGAAGCTTGTGGAGAAGGCTAAGAATTGGGTGGTCGGTGACCCTTTTGACCCTAATGTTCAACAAGGACCTCAGGTTGATAAAGCTCAATTTGAAAAAGTACTCTCCTACATTGATCATGGACAAAGAGAGGGAGCCACTTTGTTGACAGGAGGAAAGTCCATTGGCTGCAAGGGTTACTACGTCGAGCCTACAATTTTCACTGATGTTAAGGATGAAATGGTTATAGCCCAAGAGGAGATATTTGGACCTGTAATGGCTCTTATGAAGTTCAAGACTGTGGAAGAAGCTATAAAAAGGGCAAATGCTACAAAGTATGGTTTAGCGGCGGGGATTGTTACGAACAACATCGATGTAGCAAACACGGTTTCGAGGTCAGTCAGGGCCGGATCCGTCTGGATTAATTGCTACTTGGCTATGGATGTCGGGTTGGCTTTCGGTGGTTATAAGATGAGTGGATTTGGCAAGGATTATGGAATGGATGGTCTCAAGAAGTTTCTCCAAGTGAAAGCTATTGTCACTCCCATTTACAACTCCCCTTGGCTTTGA 1521 47.21 MEDKTCQGETSFVKLPEIRFTKLFINGEFVDAVSGKTMETIDPRTGEVIGRVAEGDKEDVDLAVESARRAFDHGSWPQQFPKYFNDQERGRILLKLADLIEEHAEELATLDAIDAGKLFKMCMALDVPHVAQILRYYAGAADKVSGEVLKMSGEFHGYTLLEPIGVVGLIIPWNFPMLFFFLKISPALAAGCTVVVKPAEQTPLSALYCAHLAKLAGVPDGVLNVVTGFGPTAGAAVSSHMEIDAVSFTGSTVVGRKILEAAAKSNLKTVTLELGGKSPLIIFDDADADKAADMALLGILFNKGEICVAGSRVLVQEGIYDQVVEKLVEKAKNWVVGDPFDPNVQQGPQVDKAQFEKVLSYIDHGQREGATLLTGGKSIGCKGYYVEPTIFTDVKDEMVIAQEEIFGPVMALMKFKTVEEAIKRANATKYGLAAGIVTNNIDVANTVSRSVRAGSVWINCYLAMDVGLAFGGYKMSGFGKDYGMDGLKKFLQVKAIVTPIYNSPWL 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47255350 47259833 + Bma024131.1 Bma06g01043 84545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01043 506 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 9 506 - -
Bma06g01043 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 494 IPR016162 GO:0016491
Bma06g01043 506 SUPERFAMILY ALDH-like 14 502 IPR016161 GO:0016491
Bma06g01043 506 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER C4-LIKE 9 506 - -
Bma06g01043 506 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 276 465 IPR016163 GO:0016620
Bma06g01043 506 CDD ALDH_F1-2_Ald2-like 21 497 - -
Bma06g01043 506 Pfam Aldehyde dehydrogenase family 30 496 IPR015590 GO:0016491
Bma06g01043 506 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 300 311 IPR016160 GO:0016491
Bma06g01043 506 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 272 279 IPR029510 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00054 Bma-Chr1:575450 Bma06g01043 Bma-Chr6:47255350 0 dispersed
Bma06g01043 Bma-Chr6:47255350 Bma07g00481 Bma-Chr7:5816668 0 dispersed
Bma01g00407 Bma-Chr1:3396971 Bma06g01043 Bma-Chr6:47255350 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01043 K12355 - fve:101300557 770.385