Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01049 ATGGGGTTTGTGCATTGCTCTTCCTCTCGCTTTTTGGTCTTCTTCTTCTTTCTTTCCCTTCTGCAACTGGGTTGCCGAGTTGTGTCGGAGCCGACCCAGGACAGACAAGCTCTCCTTAGTTTTCTCTCGAGAATTCCTCACGCTAATCGAGTTCGATGGAATTCCTCGGATTCAGCCTGTAATTGGATCGGAGTGGGGTGCGATCAGAATAAGTCGTTTGTTTACTCTCTCCGGCTGCCTGGAGTTGGTCTTGTTGGACCCATTCCGGAGAATTCGATTGGCTCGTTGAGTCAGCTTCGAGTTCTGAGTCTTCATTCAAATCGTCTCTCCGGCCAGATTCCTTCTGATTTCTCCAATTTGACGTTTCTCAGGAATCTGTATCTACAGAGTAATGAACTTTCCGGCGAGTTTCCAACGAGTTTGGTTTCTTTGACTCGTCTGGTTCGACTGGATTTATCTTCAAACAACTTCACCGGCTCCATTCCGTCCTCTGTAAACAATCTAACTCGTCTGACCAGACTTTTTCTCCAAAACAATGCCTTCTCCGGTGACTTGTCCGGTGTCGGAGCCGGTAACCTAAACAGCTTCAATGTATCTAATAACAAGCTAAACGGCTCAATTCCTGAGAGTTTGACGAAATTTCCGGCTTCCTCCTTCGCTGGAAACTTAGGTCTCTGTGGCGGACCTCTATCTTCCTGCAATCCATCCGAATCTCCGGTCGAGAAAAAAAGGCTCTCAACGGCAGCCATTATCGGAATAGTAATTGCTTGCGCTTTTGTCTTATTTCTCCTCCTCCTTTGCCTCTTCCTCTGCCTACGCAAGCGCAGCCGACCGCAGCAGTCAAAGTCGCCAAAACCAGCGGTTCAAGCCCAAGCCATTGCAGCGGAGGCCGGAACTTCGTCATCCAAGGACGATGTCACCGGAGGATCGATCGACGCAGAGAGAAACAAGCTGGTTTTCTTCGACGGCGGAATATACAGCTTCGATTTGGAGGATCTGTTGAGAGCTTCTGCAGAAGTTTTGGGGAAAGGAAGCGTCGGAACTTCGTACAAAGCAGTGTTGGAAGAAGGAACTACTGTAGTTGTGAAGAGATTGAAGGATGTGGTAGTGAGCAAAAAGGAATTTGAATCAACAATGGAGGTCGCGGGGAAGATGAATCACGAAAATGTAGTTTCTCTCAGAGCTTTTTACTATTCCAAGGATGAGAAATTGCTTGTTTCTGATTTCATGGCTTCCGGCAGTTTATCTGCTTCACTTCACGGCAGCAGAGGGTCAGGCCGTACGCCACTCGACTGGTCTACCCGGTTGAAAATTGCCCTCAGCGCCGCCAGGGGCCTGTCCTACCTCCACCTTTCTGGCAAACTAGTTCATGGCAACCTAAAAGCCTCCAACGTTCTTCTACGACCAGACTACGAGGCTTCACTTTCAGATTTCGGACTCAACCCCCTTTTCGGCACCTCCACCCCACCCAACCGCGTCGCCGGCTACCGCTCGCCGGAAGTTGTGGAAACCAGAAAAGTAACGTTCAAGTCCGATGTGTACAGCTTCGGGGTACTCTTATTAGAACTACTCACCGGAAAGGCGCCTAACCAAGCGTCGTTAGGCGAAGAAGGGATCGATCTGCCGCGATGGGTTCAGTCGGTGGTCCGGGAGGAATGGACGGCGGAGGTTTTTGATGTGGAGCTGATGAGGTATCATAATATAGAAGAAGAGATGGTTCAGCTGTTGCAGATTGCCATGACGTGTGTGGCAATTGTTCCGGATCAGAGGCCGGAGATCGGGGAGGTGGTCCGTCTGATCGAGGAGATTCGGAGGAGTGAGACTGATGATGGGTTACGGCAGTCTTCTGATGATCCATCAAAAGGATCGGACGGTCAGAGTGGGACTCCGGAATTGAGGAGCTCACCTAGAGATGTCACACCGTAG 1926 50.05 MGFVHCSSSRFLVFFFFLSLLQLGCRVVSEPTQDRQALLSFLSRIPHANRVRWNSSDSACNWIGVGCDQNKSFVYSLRLPGVGLVGPIPENSIGSLSQLRVLSLHSNRLSGQIPSDFSNLTFLRNLYLQSNELSGEFPTSLVSLTRLVRLDLSSNNFTGSIPSSVNNLTRLTRLFLQNNAFSGDLSGVGAGNLNSFNVSNNKLNGSIPESLTKFPASSFAGNLGLCGGPLSSCNPSESPVEKKRLSTAAIIGIVIACAFVLFLLLLCLFLCLRKRSRPQQSKSPKPAVQAQAIAAEAGTSSSKDDVTGGSIDAERNKLVFFDGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVSKKEFESTMEVAGKMNHENVVSLRAFYYSKDEKLLVSDFMASGSLSASLHGSRGSGRTPLDWSTRLKIALSAARGLSYLHLSGKLVHGNLKASNVLLRPDYEASLSDFGLNPLFGTSTPPNRVAGYRSPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMTCVAIVPDQRPEIGEVVRLIEEIRRSETDDGLRQSSDDPSKGSDGQSGTPELRSSPRDVTP 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47314103 47316550 - Bma024138.1 Bma06g01049 84551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01049 641 Gene3D Transferase(Phosphotransferase) domain 1 410 623 - -
Bma06g01049 641 MobiDBLite consensus disorder prediction 618 641 - -
Bma06g01049 641 Gene3D Ribonuclease Inhibitor 190 237 IPR032675 -
Bma06g01049 641 MobiDBLite consensus disorder prediction 606 641 - -
Bma06g01049 641 PANTHER OS05G0480400 PROTEIN 16 621 - -
Bma06g01049 641 CDD STKc_IRAK 341 603 - -
Bma06g01049 641 ProSiteProfiles Protein kinase domain profile. 335 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01049 641 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Bma06g01049 641 SUPERFAMILY Protein kinase-like (PK-like) 339 600 IPR011009 -
Bma06g01049 641 Gene3D Phosphorylase Kinase; domain 1 305 409 - -
Bma06g01049 641 PANTHER OS05G0588300 PROTEIN 16 621 - -
Bma06g01049 641 Pfam Protein kinase domain 338 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01049 641 SUPERFAMILY L domain-like 34 214 - -
Bma06g01049 641 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00266 Bma06g01049 BCT
Bma01g00415 Bma06g01049 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01049 Bma-Chr6:47314103 Bma08g01217 Bma-Chr8:51208071 0 dispersed
Bma01g00266 Bma-Chr1:2221967 Bma06g01049 Bma-Chr6:47314103 5.08E-109 transposed
Bma02g00402 Bma-Chr2:6208031 Bma06g01049 Bma-Chr6:47314103 2.26E-23 transposed
Bma08g01035 Bma-Chr8:49494359 Bma06g01049 Bma-Chr6:47314103 4.46E-19 transposed
Bma10g00070 Bma-Chr10:659422 Bma06g01049 Bma-Chr6:47314103 2.91E-150 transposed
Bma01g00415 Bma-Chr1:3475932 Bma06g01049 Bma-Chr6:47314103 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66553 PF00069 Pkinase 2.80E-35 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01049 - - pvy:116116987 905.59