Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01070 ATGGCTTGCGCCGAAGCTGTTCACCAAAACAGCCTAAATCTGGCTGAGGCTCTCCTCGAACGAGTCGGCTATCTCGCCGGGTCTCAAACTGGAGCTATGCGGAAAGTCGCCGCCTACTTTGCCGAAGCTCTAGCTCGGAGGATTTACAGGCTCTACCCTCAGAACGCCCTCGACCATTCTATTTCCGATTTGCTTCAAGTTCATTTCTACGAGAGCTGTCCTTATCTTAAATTTGCTCATTTCACAGCAAATCAAGCGATTCTCGAAGCCTTTGAAGGTAAAAATCGAGTCCACGTTATTGATTTTTCTATGAATCAAGGTATGCAATGGCCGGCGCTTCTTCAAGCTCTGGCTCTGCGACCTGGTGGTCCACCTATTTTCCGGCTCACTGGAATTGGGCCTCCGGCGCCGGATAATTCAGATTACCTCCGAGAAGTGGGTTGGAAGCTCGCCCGATTAGCTGAAATGATTCACGTTAAGTTTGAATACCGTGGGTTTGTTGCCAACAGCTTGGCAGATCTTGATTCTTCGATGCTCGAACTTAGGCCGAGTGAGACCGAGACAGTGGCGGTCAACTCAGTTTTCGAGTTTCATAAGCTCTTGGCTCGGCCGGGAGCGATCGGAAAAGTGTTGTCGGTCGTGAAGCAGATGAAGCCGGCGGTTATGACTGTAGTTGAGCAAGAAGCTAGCCATAACGGCCCGGTCTTTCTGGACCGGTTCACCGAGTCACTCCACTATTACTCGACTCTTTTTGACTCGTTGGAAGGCTCAGCCACCGTTAACAATCAAGACAAGGTAATGACAGAGATGTACTTCGGGAAGCAAATATGTAACGTGGTTGCATGTGAAGGCGCAGACCGGGTAGAGCGGCATGAGAATATGACTCGGTGGCGAACTCGGTTCACCTCAGCTGGGTTCAACTCGGCTTATTTAGGGTCTAACGCGTTCAAACAAGCCAGCATGTTGCTTGCTCTGTTCGGAAGTGGAGATGGGTACGGAGTAGAAGAGCGAAATGGGTGTCTGATGCTGGGCTGGCACAGCAGACCTCTGATCACCACCTCGGCTTGGACGGTGGAAGAGAAAGGAGACAGACTCAGTGAGTCAGCTCGGTAA 1113 50.94 MACAEAVHQNSLNLAEALLERVGYLAGSQTGAMRKVAAYFAEALARRIYRLYPQNALDHSISDLLQVHFYESCPYLKFAHFTANQAILEAFEGKNRVHVIDFSMNQGMQWPALLQALALRPGGPPIFRLTGIGPPAPDNSDYLREVGWKLARLAEMIHVKFEYRGFVANSLADLDSSMLELRPSETETVAVNSVFEFHKLLARPGAIGKVLSVVKQMKPAVMTVVEQEASHNGPVFLDRFTESLHYYSTLFDSLEGSATVNNQDKVMTEMYFGKQICNVVACEGADRVERHENMTRWRTRFTSAGFNSAYLGSNAFKQASMLLALFGSGDGYGVEERNGCLMLGWHSRPLITTSAWTVEEKGDRLSESAR 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47558156 47559268 - Bma024163.1 Bma06g01070 84572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01070 370 Pfam GRAS domain family 1 357 IPR005202 -
Bma06g01070 370 PANTHER DELLA PROTEIN GAI1-RELATED 1 358 IPR030006 GO:0003712|GO:0005634
Bma06g01070 370 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 358 IPR005202 -
Bma06g01070 370 ProSiteProfiles GRAS family profile. 1 357 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01070 Bma-Chr6:47558156 Bma06g01086 Bma-Chr6:47704024 0 dispersed
Bma01g00461 Bma-Chr1:3829901 Bma06g01070 Bma-Chr6:47558156 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57505 PF03514 GRAS 5.40E-132 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01070 K14494 - csv:101204164 611.683