Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01086 ATGAAGAGGGAACACTGCCAGGTGAATCTTCAGTCTGATTCATCTTCAATGGCCGGGAAATCTAAGGTTTGGGAAGATGAGTCGCAACGAGATGGAGGTATGGATGAACTTCTGGCTGTTTTGGGATACGAAGTGAGGTCGTCGGACATGGCCGACGTTGCCCTGAAGCTAGAACAGCTTGAAGAATTTATGGGTAATGTTCAGGAAGATGGTCTCTCGCATCTTGCATCGGAAACTGTCCATTATAATCCCTCCGACCTTTCCACCTATCTTGAAAGCATGATTTACGAGCTTAACCCATCTCCAACTTTCGATTCCGTTGTTGGCTCGCTGTCTCAAACGCTGGGAGACGATCCGTTTCTAGCTCCGGCTGATTCCTCCACCATAACCTCCGTTGATTTCTCAAAACAGAGAAACCAGAGGTTGTTCGAAGGGTCTTCTTGTTCAGATTATGATCTGAAAGCTATTCCTGGTGAGGCTATTTTAAAACAAAATACTCAGTTTGAAGAAACTTCGGATAGAGAGAAGAAACGATTGAAACCCTCATCTGGGCCGGAATCGGAATTGCTTTCCGATTCAATTACTCGGCCTGTCATCCTAGTTGACTCGCAAGAAAACGGAATTCAACTCGTACAGACTCTGATGGCTTGCGCCGAAGCTGTTCACCAAAACAGCCTAAATCTGGCTGAGGCTCTCCTCGAACGAGTCGGCTATCTCGTCGGGTCTCAAACTGGAGCTATGCGGAAAGTCGCCGCCTACTTTGCCGAAGCTCTAGCTCGGAGGATTTACAGGCTCTACCCTCAGAACGCCCTCGACCATTCTATTTCCGATTTGCTTCAAGTTCATTTCTACGAGAGCTGTCCTTATCTTAAATTTGCTCATTTCACAGCAAATCAAGCGATTCTCGAAGCCTTTGAAGGTAAAAATCGAGTCCACGTTATTGATTTTTCTATGAATCAAGGTATGCAATGGCCGGCGCTTCTTCAAGCTCTGGCTCTGCGACCTGGTGGTCCACCTATTTTCCGGCTCACTGGAATTGGGCCTCCGGCGCCGGATAATTCAGATTACCTCCGAGAAGTGGGTTGGAAGCTCGCCCGATTAGCTGAAATGATTCACGTTAAGTTTGAATACCGTGGGTTTGTTGCCAACAGCTTGGCAGATCTTGATTCTTCGATGCTCGAACTTAGGCCGAGTGAGACCGAGACAGTGGCGGTCAACTCAGTTTTCGAGTTTCATAAGCTCTTGGCTCGGCCGGGAGCGATCGGAAAAGTGTTGTCGGTCGTGAAGCAGATGAAGCCGGCGGTTATGACTGTAGTTGAGCAAGAAGCTAGCCATAACGGCCCGGTCTTTCTGGACCGGTTCACCGAGTCACTCCACTATTACTCGACTCTTTTTGACTCGTTGGAAGGCTCAGCCACCGTTAACAATCAAGACAAGGTAATGACAGAGATGTACTTCGGGAAGCAAATATGTAACGTGGTTGCATGTGAAGGCGCAGACCGGGTAGAGCGGCATGAGAATATGACTCGGTGGCGAACTCGGTTCACCTCAGCTGGGTTCAACTCGGCTTATTTAGGGTCTAACGCGTTCAAACAAGCCAGCATGTTGCTTGCTCTGTTCGGAAGTGGAGATGGGTACGGAGTAGAAGAGCGAAATGGGTGCCTGATGCTGGGCTGGCACAGCAGACCTCTGATCACCACCTCGGCTTGGACGGTGGAAGAGAAAGGAAACAGACTCAGTGAGTCAGCTCGGTAA 1755 48.95 MKREHCQVNLQSDSSSMAGKSKVWEDESQRDGGMDELLAVLGYEVRSSDMADVALKLEQLEEFMGNVQEDGLSHLASETVHYNPSDLSTYLESMIYELNPSPTFDSVVGSLSQTLGDDPFLAPADSSTITSVDFSKQRNQRLFEGSSCSDYDLKAIPGEAILKQNTQFEETSDREKKRLKPSSGPESELLSDSITRPVILVDSQENGIQLVQTLMACAEAVHQNSLNLAEALLERVGYLVGSQTGAMRKVAAYFAEALARRIYRLYPQNALDHSISDLLQVHFYESCPYLKFAHFTANQAILEAFEGKNRVHVIDFSMNQGMQWPALLQALALRPGGPPIFRLTGIGPPAPDNSDYLREVGWKLARLAEMIHVKFEYRGFVANSLADLDSSMLELRPSETETVAVNSVFEFHKLLARPGAIGKVLSVVKQMKPAVMTVVEQEASHNGPVFLDRFTESLHYYSTLFDSLEGSATVNNQDKVMTEMYFGKQICNVVACEGADRVERHENMTRWRTRFTSAGFNSAYLGSNAFKQASMLLALFGSGDGYGVEERNGCLMLGWHSRPLITTSAWTVEEKGNRLSESAR 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 47704024 47705778 - Bma024180.1 Bma06g01086 84588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01086 584 ProSiteProfiles GRAS family profile. 201 571 IPR005202 -
Bma06g01086 584 Gene3D - 33 98 IPR038088 -
Bma06g01086 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 572 IPR005202 -
Bma06g01086 584 MobiDBLite consensus disorder prediction 168 183 - -
Bma06g01086 584 Pfam GRAS domain family 210 571 IPR005202 -
Bma06g01086 584 MobiDBLite consensus disorder prediction 166 190 - -
Bma06g01086 584 MobiDBLite consensus disorder prediction 8 22 - -
Bma06g01086 584 PANTHER DELLA PROTEIN GAI1-RELATED 2 572 IPR030006 GO:0003712|GO:0005634
Bma06g01086 584 Pfam Transcriptional regulator DELLA protein N terminal 35 102 IPR021914 -
Bma06g01086 584 SMART DELLA_2 35 108 - -
Bma06g01086 584 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g01086 Bma07g00461 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01147 Bma-Chr1:12442892 Bma06g01086 Bma-Chr6:47704024 0 dispersed
Bma02g00512 Bma-Chr2:10189118 Bma06g01086 Bma-Chr6:47704024 0 dispersed
Bma02g00522 Bma-Chr2:10425819 Bma06g01086 Bma-Chr6:47704024 6.63E-57 dispersed
Bma06g01070 Bma-Chr6:47558156 Bma06g01086 Bma-Chr6:47704024 0 dispersed
Bma06g01086 Bma-Chr6:47704024 Bma07g00461 Bma-Chr7:5575831 9.66E-127 dispersed
Bma07g01634 Bma-Chr7:51948785 Bma06g01086 Bma-Chr6:47704024 2.34E-13 dispersed
Bma14g01585 Bma-Chr14:32684803 Bma06g01086 Bma-Chr6:47704024 9.43E-67 dispersed
Bma06g01086 Bma-Chr6:47704024 Bma01g00461 Bma-Chr1:3829901 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57507 PF03514 GRAS 4.30E-133 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01086 K14494 - tcc:18609825 831.632