Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g01093 | ATGGGACTGCAGAACCAGTTGAATGATTTATCATCCGATTCGATCCCTCTTCTTCTCGTGGCCTTTGTCGCCACCTGCGTCAACTACCTCCGTTCTTCCTTCTCCGATCTCCTCCACTCAGTCGGCCTCTCCCGATATCACCCCCATTCCCACCGCCAACACCTCGACGAAGGTCTCTTCTATGCCCTCGGATCCGGGCTCGCTGGCCTGATTTTCCTCGCCGAGCAACTCCACCTGAACCGCGATTCGTCCCACCGATTCGGCGACGAAATCGACGACGCTGTCAGCGGCGGCTCCGATTGCGTGGTCTGCCTGTGTAATTTAAAGGTCGGCGATAGAGTACGCAGGCTTTCCTGCCGCCATGTCTTCCACAAGAAGTGCTTCGATGGCTGGCTCGATCATCTGAACTTCAACTGCCCTCTGTGTCGCTCTCCGCTCGTTCCCGATGAGCGCGTATCCCTCACGCGCCGCCGTGTTGGGGAGGATGTCGTCACCTGGTTGTCCATGCGGTGA | 513 | 57.89 | MGLQNQLNDLSSDSIPLLLVAFVATCVNYLRSSFSDLLHSVGLSRYHPHSHRQHLDEGLFYALGSGLAGLIFLAEQLHLNRDSSHRFGDEIDDAVSGGSDCVVCLCNLKVGDRVRRLSCRHVFHKKCFDGWLDHLNFNCPLCRSPLVPDERVSLTRRRVGEDVVTWLSMR | 170 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 47744846 | 47745358 | - | Bma024187.1 | Bma06g01093 | 84595 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g01093 | 170 | Pfam | Ring finger domain | 100 | 143 | IPR001841 | - | |
Bma06g01093 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 101 | 143 | IPR001841 | - | |
Bma06g01093 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 157 | IPR013083 | - | |
Bma06g01093 | 170 | SMART | ring_2 | 101 | 142 | IPR001841 | - | |
Bma06g01093 | 170 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHA2A | 1 | 168 | - | - | |
Bma06g01093 | 170 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 168 | - | - | |
Bma06g01093 | 170 | SUPERFAMILY | RING/U-box | 100 | 149 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g01093 | Bma-Chr6:47744846 | Bma12g00872 | Bma-Chr12:39798997 | 9.75E-15 | dispersed | |
Bma01g00453 | Bma-Chr1:3762198 | Bma06g01093 | Bma-Chr6:47744846 | 9.18E-96 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g01093 | K16282 | - | zju:107413314 | 229.565 |