Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01108 ATGCACGCTTACAATCGACTGCCTAGCAGTGGTCACTCCTCCCCGTCCCCTCCTGCTTCGCCTATTCGCTCACCGCGTTTGCGCCACGCCCGCTCCAAGGCCGGCCGGTTCACCTCCGGTCAGCAAACGGCCCGGACCCTACCTCAGCGCCTTGCCTGGCTCATCCTATCCGTCCTTCTCCGTCGCCAGGGCATCTTTCTTTTCGCTCCTCTTATTTACATCTCCGGTATGCTTCTTTATATGGGAACTGTCTCATTTGATGTCGTTCCGATTATCAAGCATCGTCCTGCTTCCGGTACTATCTACCGGAGCCCTGAGGTCTATGCCAAGCTCCGCCCCGAGATGGATGCTGATAATTCTTCTGTCGATGCGTTATCAACAATTTGGAGATACTCCCATAAAGGCGGTGAGTGGAGGCCGTGTCCTCGCAAGTCTTCAGAAGGATTACCAGACTTAAATGGGTATATATATGTCGAGGCAAATGGTGGCTTAAATCAACAGAGGACATCGAAAAATTGTGGGCAAAAAAACTGTATTCTACTCACCATGTCTGCCTGCCCTGCTGTTTTCTATCCTTTGCAGGTTTGTAATGCTGTTGCTGTGGCTGGTTTTCTTAATGCAACACTTGTGATGCCCAATTTCCTTTTTCATAGCGTTTGGAGAGATCATAGTAAATTTAAAGACATTTTTGACGAGGATTATTTCATTAATACCCTGGAGAATGAAGTGCGGGTTGTAAGAAAGATTCCTGAATACATAATGGAACGATTTGACCACAACATGAGCAATGTCTATAACTTTAGAGTAAAAGCGTGGTCTTCTATTCATTATTACAAGGATACAGTCCTTCCTAGGCTACTTGAGGAAAAAGTTGTAAGGATTTCTCCTTTTGCAAATCGATTATCATTTGATGTTCCCCCTGCTGCTCAACATCTTCGATGCTTGGCAAACTATGAAGCTTTGAGGTTTTCCAGTCCCATATCGTCAATAGCAGACGCTTTGGTTGCTAGAATGAAGGAACGCAGTGCTACCAATGGTGGAAAATACGTTTCAGTGCATCTTCGGTATGAAGAGGACATGGTTGCCTTTTCTTGCTGTGTATTTGATGGGGGGCAAAAAGAGGAAGAAGACATGATAGCAGCAAGAGAAAAAGGTTGGAGGGGAAAATTTACAAAACCTGGCCGAGTTATACTCCCTGGAGCAAATAGGGTCAATGGAAAATGTCCGATGACTCCTTTGGAGGTTGGGTTGATGCTTAGGGGAATGGGCTTTGACAGAAATACATATATCTATTTGGCATCTGGAGAGATATATGATGCTGAGAGATCAATGGCCCCATTAATAGAGATGTTTCCAAATATGCAAACGAAGGAGATGCTGGCTTCAGTTGAGGAGCTTTCACCATTTAAGGTTTACTTCACAGTATATGGGCATCTTAAAGCCCTACTCCATTCAAATGTCCTGGAGAGATTAAATTCATGCAAGTTCTTATTTACTGTGGTTGTAGCAGGTCATGGTGACCAACTCTCATTGGGTGCAAATATGTTTGCTGCTGCAAGTGCAGGGGCTGCCACTGCCCTCACCACCAATCCATTGTGGGTTGTTAAAACTAGACTCCAAACTCAGGGAATGAGGCCCGGTGTGGTTCCTTATACAGGAATACTTTCGGCGTTCAGAAGGATTGTACACGAGGAAGGAGTGAGAGGACTTTATAGTGGAATCATCCCTTCATTGGCCGGGATAAGTCACGTTGCGATACAATTTCCTGCGTACGAGAAGCTCAAATTTTACTTGGCACAAAGGGAAAACACAACCACTGATAAGCTAGGCCCTGGAAGTGTAGGCATTGCCTCTGCCATTTCCAAAATCACTGCTTCTTTATTAACCTATCCTCATGAGATCTTTTCTCTCTCTCTTACATATTTGCAGGTAATTCGTTCTCGTCTTCAAGAGCAAGGACAACAAGCGAGAACTGTCGGGATTCAATATACCGGGGTGATAGATTGCGTAAAAAAAGTGTTGGAAAAGGAAGGTTTTTGCGGATTTTATCGGGGTTGCGCAACCAATCTTCTGCGAACAACCCCATCAGCCGTTATTACTTTTACTAGTTACGAGATGATATGCCGATCCCTACAGCAACTTTTTCCGCCGGAAAATGGCGAGAGTTCATACCACAGATAA 2181 44.98 MHAYNRLPSSGHSSPSPPASPIRSPRLRHARSKAGRFTSGQQTARTLPQRLAWLILSVLLRRQGIFLFAPLIYISGMLLYMGTVSFDVVPIIKHRPASGTIYRSPEVYAKLRPEMDADNSSVDALSTIWRYSHKGGEWRPCPRKSSEGLPDLNGYIYVEANGGLNQQRTSKNCGQKNCILLTMSACPAVFYPLQVCNAVAVAGFLNATLVMPNFLFHSVWRDHSKFKDIFDEDYFINTLENEVRVVRKIPEYIMERFDHNMSNVYNFRVKAWSSIHYYKDTVLPRLLEEKVVRISPFANRLSFDVPPAAQHLRCLANYEALRFSSPISSIADALVARMKERSATNGGKYVSVHLRYEEDMVAFSCCVFDGGQKEEEDMIAAREKGWRGKFTKPGRVILPGANRVNGKCPMTPLEVGLMLRGMGFDRNTYIYLASGEIYDAERSMAPLIEMFPNMQTKEMLASVEELSPFKVYFTVYGHLKALLHSNVLERLNSCKFLFTVVVAGHGDQLSLGANMFAAASAGAATALTTNPLWVVKTRLQTQGMRPGVVPYTGILSAFRRIVHEEGVRGLYSGIIPSLAGISHVAIQFPAYEKLKFYLAQRENTTTDKLGPGSVGIASAISKITASLLTYPHEIFSLSLTYLQVIRSRLQEQGQQARTVGIQYTGVIDCVKKVLEKEGFCGFYRGCATNLLRTTPSAVITFTSYEMICRSLQQLFPPENGESSYHR 726
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 47864999 47877503 - Bma024204.1 Bma06g01108 84610
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01108 726 PANTHER PROTEIN ESMERALDA 1 195 487 - -
Bma06g01108 726 ProSiteProfiles Solute carrier (Solcar) repeat profile. 613 710 IPR018108 -
Bma06g01108 726 Gene3D Mitochondrial carrier domain 461 716 IPR023395 -
Bma06g01108 726 PANTHER PROTEIN ESMERALDA 1 1 170 - -
Bma06g01108 726 MobiDBLite consensus disorder prediction 1 42 - -
Bma06g01108 726 Pfam GDP-fucose protein O-fucosyltransferase 194 470 IPR019378 -
Bma06g01108 726 CDD O-FucT_plant 155 487 IPR024709 -
Bma06g01108 726 ProSiteProfiles Solute carrier (Solcar) repeat profile. 509 597 IPR018108 -
Bma06g01108 726 PANTHER - 1 170 IPR024709 -
Bma06g01108 726 Pfam Mitochondrial carrier protein 508 600 IPR018108 -
Bma06g01108 726 Pfam Mitochondrial carrier protein 614 712 IPR018108 -
Bma06g01108 726 PANTHER - 195 487 IPR024709 -
Bma06g01108 726 SUPERFAMILY Mitochondrial carrier 471 706 IPR023395 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01108 Bma-Chr6:47864999 Bma07g01690 Bma-Chr7:52453878 2.77E-162 dispersed
Bma13g00073 Bma-Chr13:844469 Bma06g01108 Bma-Chr6:47864999 1.90E-85 transposed
Bma01g00466 Bma-Chr1:3858031 Bma06g01108 Bma-Chr6:47864999 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01108 - - csv:101205140 729.169