Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01154 ATGCTGGATGCAGTATTGAGCAGTCGAGCCTTCGACTACTTGATATCGCACTCGGTTTCCTGTGACTCTCTTTTAGTGGCGGCCGAAAGTGACGACAACTTACAAAACAAGCTTTCTGATCTGGTGGACCGCCCTAATGCGTCCAATTTCAGCTGGAACTACGCCATTTTCTGGCAGATTTCGAAGTCGAAATCCGGCGAGTGGGTTTTGGGATGGGGAGATGGGTGCTGCCGAGAGCCGAGAGAAAATGAAGATGCAGAAGCGTCGAGAATTCTCAGTTTCCGGGTAGACGATAAAACGCAGCAGGACATGAGGAAAAGAGTCCTGCAGAAACTCCATACCTTGTTCGGGGGATCCGATGAAGATAATTACGCCTTTGGATTAGACAGAGTGACTGATACAGAGATCTTCTTCCTCGCCTCTATGTACTTCTCTTTTCCTCGAGGAGAAGGTGGGCCTGGTAAGTGCTTAGCTTCTGCCAAACACGTCTGGCTCGTCAATTTGCTGCAATCTCAATACGATTACTGCGTTCGATCCTTTTTAGCTAAATCGGCTGGAATTAGAACTGTTGTTTTAGTGCCCACTGATGTTGGAGTGGTTGAAATTGGTTCTGTGAGATCTGTTTCCGAGAGCTTAGATTTGGTGAATTCTATCAGATCCTTATTTTCCTCTCAGCCGTGTTTTAGCAGGCTGGAGCAGCCATTGGCCACGGATGAGAAGAAAGGCGAGAGTACCCATTTTAGAGAAGGGAATTCTAAGGTTTTTGGGCAAGATTTTAGTTCTGTGAAAATGGGTCGATCCAATTTCAGAGAGAAGCTTGCTATTAGAAAGATGGAGGATAGATCTTGGGAAGGTAATGCAAATGGAGGAAGAATTGCATTTCAGAGCCACCCTCAAAATGGAATGCATAGTTCCGGTTGGGGCATTCATGGCCTCAAACATGGCAGCTCTGCAGAAGTCGTTCCCCCAAGATTAAACCAGGTTCAGCAAAAACTGATTAATGGCGTAAGAGAAGATTTCCGGTTAGGCAATTATCAACAGCAAATGCAGATTGATTTTTCAGGGGCAACTTCACGGCCTTCTGTGATTTCAAGGCTTAATGCAGAATCGGAGCATTCGGATGCAGAAGCTTCCTGCAAAGAAGAGACACCGATAAGCACAGCAGACGGAAAGAGGCCAAGAAAACGAGGGAGGAAACCTGCAAACGGGCGAGAAGAGCCCCTCAATCACGTTGAAGCAGAGAGACAGCGAAGGGAGAAGCTAAACCAGCGATTCTACGCCTTACGAGCAGTCGTCCCAAACATCTCCAAAATGGACAAAGCCTCTTTGTTGGGAGACGCCATTGCTTACATAAACGAGCTGCAAGCAAAGCTCAAAGCCATGGAAGTAGAGAGGGAAGAGAAATTCAGCAACAATTCGAGGGTAAATCCAGAAAATCAAAATCAGGTGGAAATGGAAGCTGTGAACGATGAGATAATTGTAAGACTGGAGTGCCCTTTGGAGTCACACCCTGCATATAAAGTAATTCAAGCAATTAAAGACGCTCAGTTAACTGTTGTAGACTCAAAACTCTCAGCAGCAGGAGGTACAGTTTACCATAGCTTTGTGATAAAACCTCAAGGATCTGAGCTGCTAACGAAGGAAAAGTTAATGGCTGCAATTTCCCAGGAATCCAACTTGATACCACCATTGTCGCCGTCAACTGGATAG 1710 45.96 MLDAVLSSRAFDYLISHSVSCDSLLVAAESDDNLQNKLSDLVDRPNASNFSWNYAIFWQISKSKSGEWVLGWGDGCCREPRENEDAEASRILSFRVDDKTQQDMRKRVLQKLHTLFGGSDEDNYAFGLDRVTDTEIFFLASMYFSFPRGEGGPGKCLASAKHVWLVNLLQSQYDYCVRSFLAKSAGIRTVVLVPTDVGVVEIGSVRSVSESLDLVNSIRSLFSSQPCFSRLEQPLATDEKKGESTHFREGNSKVFGQDFSSVKMGRSNFREKLAIRKMEDRSWEGNANGGRIAFQSHPQNGMHSSGWGIHGLKHGSSAEVVPPRLNQVQQKLINGVREDFRLGNYQQQMQIDFSGATSRPSVISRLNAESEHSDAEASCKEETPISTADGKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKAMEVEREEKFSNNSRVNPENQNQVEMEAVNDEIIVRLECPLESHPAYKVIQAIKDAQLTVVDSKLSAAGGTVYHSFVIKPQGSELLTKEKLMAAISQESNLIPPLSPSTG 569
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 48458751 48460460 + Bma024255.1 Bma06g01154 84656
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01154 569 Coils Coil 451 471 - -
Bma06g01154 569 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 34 222 IPR025610 -
Bma06g01154 569 CDD bHLH_AtAIB_like 402 467 - -
Bma06g01154 569 MobiDBLite consensus disorder prediction 286 315 - -
Bma06g01154 569 PANTHER MYC 3 562 IPR045084 GO:0003700|GO:0006355
Bma06g01154 569 PANTHER TRANSCRIPTION FACTOR MTB1 3 562 - -
Bma06g01154 569 MobiDBLite consensus disorder prediction 399 416 - -
Bma06g01154 569 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 408 469 IPR036638 GO:0046983
Bma06g01154 569 SMART finulus 411 460 IPR011598 GO:0046983
Bma06g01154 569 Gene3D - 399 471 IPR036638 GO:0046983
Bma06g01154 569 MobiDBLite consensus disorder prediction 366 416 - -
Bma06g01154 569 Pfam Helix-loop-helix DNA-binding domain 409 455 IPR011598 GO:0046983
Bma06g01154 569 MobiDBLite consensus disorder prediction 369 391 - -
Bma06g01154 569 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 405 454 IPR011598 GO:0046983
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bma02g01104 Bma06g01154 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01154 Bma-Chr6:48458751 Bma10g00396 Bma-Chr10:4119321 3.12E-07 dispersed
Bma14g01780 Bma-Chr14:38342757 Bma06g01154 Bma-Chr6:48458751 4.54E-07 dispersed
Bma14g01995 Bma-Chr14:43258483 Bma06g01154 Bma-Chr6:48458751 1.29E-10 dispersed
Bma10g00424 Bma-Chr10:4463780 Bma06g01154 Bma-Chr6:48458751 7.10E-75 transposed
Bma02g01104 Bma-Chr2:52722018 Bma06g01154 Bma-Chr6:48458751 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57511 PF14215 bHLH-MYC_N 1.50E-54 CL0161 Bma TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01154 - - qsu:111989355 739.184