Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01198 ATGTGGAAATTATGCTCATCGTCTTCCTGTAACAGTCAGATCATCGTTTGCTCTTCTAAATCACAAGTATCACTCAACTCTGAATCTGAAAATGTTGCCACTACCCATTCCGGAGCAGAAAATATAGAACCTCTGGCTGCCAAAAACTATCATAAAACCAAACCCTTGACTGCATTTTCACTCATGTATTCAAATTCTCAATTACGAAATACTGTTCCTCTTTCTATGTCAAACCCACTATCTAATTATCGATCATATTCATCATCATCTGGTAAAGTGGGGGACTACAGAGATGTGGGAGTTAAGGCAGCGTCTGGCACTGATGAAGGGAATGTTAATACCACGAGCATTCTTGGAGGTGATTGGCATGATAAAGTTAAGGATACTCATCAAAGTGCTGTAGAGGCTGTATCAACTGGTAGAGTGGGGGACTACAGAGATGTGGGAGTTAAGGCAGCGTCTGGCACTGATGAAGGGAATGTTAATACCACGAGCATTCTTGGAGGTGATTGGCATGAAAAAGTTAAGGATGCTCATCAAAGTGCTGTAGAGGCTGTATCATTTTTTGGGCAGAGGGCAAAAGAAGTATCTGATGAATGGACACCTTATATTGATCAATTGTTTGATGCACATCCATATCTCAAAAATGTGATTGTTCTGTTGACTGCCTCTGTTTTGGGATGGGTGGTGATGCCTAAGGTGTTGAGAAGATTTCATAAGTATGCAACATCAGGGCCGGCAGAACCAATTCCTTACGAGAAGACCTTTTGGGGTGCCTTGGAGGACCCCATTCGATACCTTACGACGTTCATTGCATTCACGCAAATTGTCATGATGGTAGCACCAACAAGTATAGCATCGCAATATGTTATACAGGCCTCCAGGGGAGCAGTTATTGTATCCTTGGTTTGGTTTTTGTATAGATGGAAAAAAAATGTGCTAAACCGTGCATTGGCTACAAAGAATGTGACAGGGTTTGATCTGGATAGGTTACTGGCTGTGGATAAACTTTCATCCATTGGACTATTTGTCCTTGGCTCAATGGCTCTTGCGGCAGCTTGTGGTGTGGTTGATCAGTCATATCTTACTGTTGGTGGAATTGGAGGAGTTGCTTTTGCTGCAATGGACTTGCTCGCAAATGTCCTCAGTGGTTTAGTCTTGCTGTCTTTGAAGGCCTTCCCAACTGGATACACAATAAAGGCTGGATGGATAGATGGTCAGGTGGTTGAAGTGGGACTAATGAAAACATCATTGCTTAATGCTGAGAAACTTCCCATCAGGGTTCCTAATTCCATGTTTGCTAATCAGGTTATAACGATCAGCCCACCAGCTCAACGGCGATCGATGACCACTAAAATCCGTCCATAA 1368 42.84 MWKLCSSSSCNSQIIVCSSKSQVSLNSESENVATTHSGAENIEPLAAKNYHKTKPLTAFSLMYSNSQLRNTVPLSMSNPLSNYRSYSSSSGKVGDYRDVGVKAASGTDEGNVNTTSILGGDWHDKVKDTHQSAVEAVSTGRVGDYRDVGVKAASGTDEGNVNTTSILGGDWHEKVKDAHQSAVEAVSFFGQRAKEVSDEWTPYIDQLFDAHPYLKNVIVLLTASVLGWVVMPKVLRRFHKYATSGPAEPIPYEKTFWGALEDPIRYLTTFIAFTQIVMMVAPTSIASQYVIQASRGAVIVSLVWFLYRWKKNVLNRALATKNVTGFDLDRLLAVDKLSSIGLFVLGSMALAAACGVVDQSYLTVGGIGGVAFAAMDLLANVLSGLVLLSLKAFPTGYTIKAGWIDGQVVEVGLMKTSLLNAEKLPIRVPNSMFANQVITISPPAQRRSMTTKIRP 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 49117424 49120162 + Bma024308.2 Bma06g01198 84700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01198 455 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED 159 454 - -
Bma06g01198 455 Pfam Mechanosensitive ion channel 336 438 IPR006685 GO:0016020|GO:0055085
Bma06g01198 455 Gene3D - 289 391 - -
Bma06g01198 455 Gene3D - 393 439 IPR023408 -
Bma06g01198 455 SUPERFAMILY Sm-like ribonucleoproteins 376 439 IPR010920 -
Bma06g01198 455 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 159 454 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01198 Bma-Chr6:49117424 Bma06g01199 Bma-Chr6:49122284 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01198 K22047 - csin:114308416 356.681