Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g01199 | ATGGCTGGAATTAGGTTATCTATGTTGAAGAGGCGACTGTGTGATTGGAAGCCACTTTCCTTTCAATGTTTCGATTATATTGAATGTGGAAATTATGCTCATAGTCTTCGTGTAACAGTCAGATCATCGTTTGCTCTTCTAAATCACAAGTATTACTCAATTCTGAAATCTGAAAATGTTGCCACTACCCATTCCGGAGCAGCATGTATAGAACCTCTGGCTGCCAAAAACTATTATAAAACCAAACCCTTGACTGCATTTTCACTCATGTATTCAAATTCTCAATTACGAAATACTGTTCTTCTTTCTATGTCAAACCCACTATATAATTATCGATCATATTCATCATCATCTGGTAATAAAGTGGGGGACTACAGAGACGTGGGAGTTAAGGCAGCGTCTGGCACTGATGAAGGGGATGTTAATACCACGAGCATTCTTGGAGGTGATTGGCATGAAAAAGTTAAGGATGCTTATCAAAGTGCTGTAGAGGCTGTATCATTTTCTGGGCAGAGGGCAAAAGCAGTATCTGATGAATGGACACCTTATATTGATCAATTGTTTGATGCACATCCATATCTCAAAAATGTGATTGTTCCGGTGAGTTCTACATTGACTGCCTCTGTTTTGGCGTGGGTGGTGATGCCTAAGGTGTTGAGAAGATTTCATAAGTATGCAACATCAGGTCCGGCTGCTCTTCTCTCTGGCAGTCTATTAGGAGAACCAATTCCTTACGAGAAGACCTTTTGGGGTGCCTTGGAGGACCCCGTTCGATACCTTACGACGTTCATTGCATTCACGCAAATAGGCATGATGGTAGCACCAACAAGTATAGCATCGCAATATGTTATACAGGCCTCCAGGGGAGCAGTTATTGTATCCTTGGTTTGGTTTTTGTATCGATGGAAAACAAATGTGCTAACCCGTGCATTGGCTACGAAGAATGTGGCAGGGTTTGATCGGGATAGGTTACTGGCTCTGGATAAACTTTCATCCATTGGACTATTTGTCCTTGGCTTAATGGCTTTTGCCGAAGCTTGTGGTGTGGCTGTTCAGTCTATTCTTACTGTTGGTGGAATTGGAGGTGAGATCCAGCTTCCTGTGATCAAATTTCATCATTCTTTCTTGTATTCAGGAGTCGCTACTGCTTTTGCTGCAAAGGACGTCCTCGGAAATGTCCTTAGTGGTTTAGTCATGCAATTTTCGAAGCCCTTCTCAATTGGAGACACAATAAAGGCTGGTTCGGTAGAAGGTCAGGTGGTTGAAATGGGACTAACGACGACATCATTGCTTAGTGCTGAGAAATTTCCCGTTATCGTTCCTAATTCGCTGTTCTCTAGCCAGGCTGGTTCGGTAGAAGGTCAGGTGGTTGAAATGGGACTAACGACGACATCATTGCTTAGTGCTGAGAAATTTCCCGTTATCGTTCCTAATTCGCTGTTCTCTAGCCAGGTTATAACGAACAAATCACGAGCTCAATGGCGATCGATGACCGCTAAAATCCCTCTGCAAGTTGATGATTTCAGTAAGATTGCTCAAATAGGAGAAGAGATAAAGAGTATGCTAAGATCAAACCCAAATGTGTTTTTGGAGAAGGAAGCTCCTTATTGCTATCTCTCCCGCGTTGAAAGTTCGTTTTCTGAGTTAACTCTCGGCTACAACCTCAAACATATGGTATGTTTTGTCCCGTTTCTTACTACGCATTGGGTTCCATTATTCATTGGTTTAGGGTTCATTTATATCGAATTTCGCACTATTATCATACTTTGA | 1770 | 42.09 | MAGIRLSMLKRRLCDWKPLSFQCFDYIECGNYAHSLRVTVRSSFALLNHKYYSILKSENVATTHSGAACIEPLAAKNYYKTKPLTAFSLMYSNSQLRNTVLLSMSNPLYNYRSYSSSSGNKVGDYRDVGVKAASGTDEGDVNTTSILGGDWHEKVKDAYQSAVEAVSFSGQRAKAVSDEWTPYIDQLFDAHPYLKNVIVPVSSTLTASVLAWVVMPKVLRRFHKYATSGPAALLSGSLLGEPIPYEKTFWGALEDPVRYLTTFIAFTQIGMMVAPTSIASQYVIQASRGAVIVSLVWFLYRWKTNVLTRALATKNVAGFDRDRLLALDKLSSIGLFVLGLMAFAEACGVAVQSILTVGGIGGEIQLPVIKFHHSFLYSGVATAFAAKDVLGNVLSGLVMQFSKPFSIGDTIKAGSVEGQVVEMGLTTTSLLSAEKFPVIVPNSLFSSQAGSVEGQVVEMGLTTTSLLSAEKFPVIVPNSLFSSQVITNKSRAQWRSMTAKIPLQVDDFSKIAQIGEEIKSMLRSNPNVFLEKEAPYCYLSRVESSFSELTLGYNLKHMVCFVPFLTTHWVPLFIGLGFIYIEFRTIIIL | 589 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 49122284 | 49126278 | + | Bma024309.1 | Bma06g01199 | 84701 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g01199 | 589 | PANTHER | YNAI-RELATED MECHANOSENSITIVE ION CHANNEL | 105 | 448 | - | - | |
Bma06g01199 | 589 | PANTHER | YNAI-RELATED MECHANOSENSITIVE ION CHANNEL | 449 | 558 | - | - | |
Bma06g01199 | 589 | SUPERFAMILY | Mechanosensitive channel protein MscS (YggB), transmembrane region | 288 | 362 | IPR011014 | GO:0016020 | |
Bma06g01199 | 589 | Gene3D | - | 282 | 403 | - | - | |
Bma06g01199 | 589 | Gene3D | - | 404 | 448 | IPR023408 | - | |
Bma06g01199 | 589 | Gene3D | - | 449 | 488 | IPR023408 | - | |
Bma06g01199 | 589 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED | 105 | 448 | - | - | |
Bma06g01199 | 589 | Pfam | Mechanosensitive ion channel | 450 | 537 | IPR006685 | GO:0016020|GO:0055085 | |
Bma06g01199 | 589 | Pfam | Mechanosensitive ion channel | 378 | 448 | IPR006685 | GO:0016020|GO:0055085 | |
Bma06g01199 | 589 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED | 449 | 558 | - | - | |
Bma06g01199 | 589 | SUPERFAMILY | Sm-like ribonucleoproteins | 388 | 447 | IPR010920 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g01198 | Bma-Chr6:49117424 | Bma06g01199 | Bma-Chr6:49122284 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g01199 | K22047 | - | csin:114308416 | 549.28 |