Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01211 ATGGTCTATAGCTATACCAAAAGCTTTAATGCATTTGCGGCAAAGCTTTCACCAATTGAAGCCCAAAAGTTATCTGCCACTTACTTCAAGCTTGACAAGATTCCCGACCATGCCGATATCTTATCTCCAATAGATGTGGACGGCCATGGTACTCACACCTCATCAACCTTAGCAGGCAGCATAGTTCAAGAAGCTAGCCTGTTTGGCCTCGCCAAGGGCTCTGCTCGAGGGGCCGTGCCGTCTGCTCGGGTGGCCATGTACAAGGTCTGTTGGGCGAGCTCTGGGTGTTCAGACATGGACTTGCTTGCTGCATTTGATGCTGCTATACACGATGGTGTGGATATTATATCGGTGTCTATTGGCGGTGGCACATCCAACTACTCAGATGACCCCATAGCAATTGGATCATTTCAAGCACTGAAGAAGGGGATTATCACTTTGGCATCAGCTGGAAATGACGGACCCAGCCTTTCTAGTGTCGTTAATCACGCCCCATGGGTAGTGACTGTGGCCGCCAGTGGCATTGACAGACAGTTCAGAAGCAGAGTTGAGTTGGGCAATGGGAAGAACATCTCTGGGATTGGAGTGAGCACATTCCAGCCAAAAGCAAGATTATACCCCTTAGTCAGTGGAGTTGATGTGGCCAGAAACTCCGCAAGCAAGGAAAATGCAAGGTCTTGCACAGAGGACTCTTTAGATCCGAGTAAGGTGAAGGGAAAGCTTATGTTCTGTAAATTATCAGCATGGGGTACTGATTCCATTGTGAAAGGATTTGGCGGGACGGGCATTATCGTTCAAAATGGGCAATATCCCGACAATGCTCAGATTTTCATGACACCAGGAACCGTCGTAAATGACACCATTGGCGATATCATAGGCAATTATATACAATCCTCAGAATCTCCCAAGGCAGTGATTTATAAGTCCCCTGACATTGCAGCACCAGGAATTGACATTTTAGCCGCATACACTCCCTTGAAATCACTCACGGGATTGAAAGGAGATACTCAGTTTTCAAAATTTACCCTCATGTCTGGAACTTCCATGGCTTGTCCTCATGTAGCTGGAGCAGCGGCTTATATCAAGTCCTTTCGGCCAAATTGGTCCCCTTCTGCTATCAAATCAGCCTTGATCACTTCAGCAAAGCCGATGAGCCGGAGAGTGAACAGGGAAGCAGAATTTGCATATGGTGCCGGTCAATTAAACCCAACAAGAGCTCTAAATCCAGGCTTAGTCTACGAAATGGAGGACATAAACTACATTCAATACCTCTGCAGCGAAGGGTACCATGGAGAGTCCTTATCTGTCCTCATCGGTTCAAAATCAACCAACTGTTCGTCTCTGCTTCCAGGATTCGGATATGACAGTCTAAACTATCCTACCATGCACTTAAGCTTGAAAACCACAGAAAGGCCTACAATGGCGGTGTTTAGGAGGAGAGTCACAAATGTCGGTCCGGCTCTGTCGATTTACAACGTCACCATTAAATCTCCGCCGGGAGTGGATATCAGCGTTCGTCCGGAGAAGCAGAACTACATAATCCATATGGAGAAGAACAGGATCAGAGACTCCATTTCTGAGCTCTCACTTCATGAAGAAGAACCTGAATTTGAGAGAAACAAGATTCTTTATGTATACGAAACTGTAATTTCAGGCTTCGCAGCCAAGCTCTCCGGCGAACAACTCCGGTTCCTGAGCAAAGTTCCCGGGTTTCTTTCTGCGACTCCAGATGAAATGCTGCACCTCCACACTACACACACCCCGCAGTTCCTCGGCCTGAATTTGGCTTCGGATGTGATCATCGGCGTCCTCGATACCGGAATCTGGCCAGAGCATATTAGTTTTCAAGATAAAGGGATGTCCAAAGTGCCCTCTAAATGGAGAGGCATTTGTGAAAATGGCACAAAGTTTTCAAGCTCAAACTGTAATAGAAAACTTATTGGTGCAAGAGCATTATACAAAGGATACGAATCGATTGTCGGAAAAATCAACGAAACTTCGAATTATAGATCCGCCCGAGACTCCGATGGACATGGAACGCACACTGCCTCGACTGCAGCCGGTAATCGTGTGCAAAAGACAAGCTTTTATGGCTTGGCCAAAGGCACAGCCAGTGGAATGAGTTATACTTCAAGAATTGCAGCCTATAAAGTTTGTTGGCCATTTGGCTGTGCTAGTTCTGATATTTTAGCAGCCATGGACCGTGCCATCTTGGACGGTGTAGATGTTTTGTCGCTCTCCTTGGGCGGCCTTTCACGGCCCTACTATAGTGACAGCATTGCTATAGCCTCGTTCGGGGCGACACAAAAGGGGGTTTTTGTCTCCTGCTCAGCCGGGAATTCCGGCCCGTTTAGCTCGACCGTTGGGAACATCGCACCGTGGATCATGACAGTGGCTGCGAGCTACATCGATCGAACTTTCCCGACGACAGTAAAGCTTGGAAACGGACAAACATTTCGAGGGTCGTCTTTATATACGGGCAAGAACACCAAGAATTTACCACTTGTTTTCAACACATCTGCAGGAGGACAAGGAGCTGAGTATTGCCTCAGCGGCTCTCTCACTCCAAAGCTCGTAAAAGGCAAAATCGTGGTGTGTCTACGAGGATTGAATGGCCGGACTGAAGGAGAAGAGCTCTTTGCCGATCCGCACATATTGCCAGCCACTTCCCTCGGAGCCTCGGCTGCCATGGCTATCAGAGCTTATGTCACCTCGAAAAATAACTCGAAAGCTTCAATTAAGTTCAAAGGAACGGCCTACGGCAACCGAGCACCGATGGTGGCTGCGTTCTCCTCTCGGGGGCCTAGCTTGATCGGCGGAGACGTGATCAAGCCCGATTTGACCGCACCAGGAGTCAACATATTGGCTGCTTGGCCACCCAAACCTAGCCCAAGCTTGCTCGAGAGTGACAAAAGAAGTAATGTCAGCTCAAGCAATCTCCGACCCGCGAGTCCGTTTGCGTTTGGTTCGGGCCATGTTCAACCCGAGAGAGCTTCCGACCCGGGCCTAGTTTACGACATTACGCCAAACGACTACCTTGAATACTTATGCAGCCTAAATTACACCACCGCTCAAATATCTATAGTCTCGAGAACCAATTTCAATTGTTCTAAACAAGAAAGTCTCCAGCCAGGGGACCTGAATTACCCTTCATTTTCAGTGGTTTTGAACAAAACCGGCCGAATAATGAGCGTCACTTACAAGAGAACACTGACGAATGTCGGAATTGCGAGAAGTACTTATGCCGTGAAAGTGAGCAACCCCATCGGAGTTGAAGTGATTGTGCAGCCTCCTAGCTTAGTTTTCAATGAACTTGGCCAAAAACGGAGCTTTAACGTCAGTTTCAAGGCCGCAATAGAAGCATCCACTCTTCCATCCGCCTCTTCTTTCGGATCTCTAACTTGGGTTTCAAGGAAATATGCAGTCAGAAGTCCCATTGCAGTAACTTGGCAATAA 3456 47.8 MVYSYTKSFNAFAAKLSPIEAQKLSATYFKLDKIPDHADILSPIDVDGHGTHTSSTLAGSIVQEASLFGLAKGSARGAVPSARVAMYKVCWASSGCSDMDLLAAFDAAIHDGVDIISVSIGGGTSNYSDDPIAIGSFQALKKGIITLASAGNDGPSLSSVVNHAPWVVTVAASGIDRQFRSRVELGNGKNISGIGVSTFQPKARLYPLVSGVDVARNSASKENARSCTEDSLDPSKVKGKLMFCKLSAWGTDSIVKGFGGTGIIVQNGQYPDNAQIFMTPGTVVNDTIGDIIGNYIQSSESPKAVIYKSPDIAAPGIDILAAYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAGAAAYIKSFRPNWSPSAIKSALITSAKPMSRRVNREAEFAYGAGQLNPTRALNPGLVYEMEDINYIQYLCSEGYHGESLSVLIGSKSTNCSSLLPGFGYDSLNYPTMHLSLKTTERPTMAVFRRRVTNVGPALSIYNVTIKSPPGVDISVRPEKQNYIIHMEKNRIRDSISELSLHEEEPEFERNKILYVYETVISGFAAKLSGEQLRFLSKVPGFLSATPDEMLHLHTTHTPQFLGLNLASDVIIGVLDTGIWPEHISFQDKGMSKVPSKWRGICENGTKFSSSNCNRKLIGARALYKGYESIVGKINETSNYRSARDSDGHGTHTASTAAGNRVQKTSFYGLAKGTASGMSYTSRIAAYKVCWPFGCASSDILAAMDRAILDGVDVLSLSLGGLSRPYYSDSIAIASFGATQKGVFVSCSAGNSGPFSSTVGNIAPWIMTVAASYIDRTFPTTVKLGNGQTFRGSSLYTGKNTKNLPLVFNTSAGGQGAEYCLSGSLTPKLVKGKIVVCLRGLNGRTEGEELFADPHILPATSLGASAAMAIRAYVTSKNNSKASIKFKGTAYGNRAPMVAAFSSRGPSLIGGDVIKPDLTAPGVNILAAWPPKPSPSLLESDKRSNVSSSNLRPASPFAFGSGHVQPERASDPGLVYDITPNDYLEYLCSLNYTTAQISIVSRTNFNCSKQESLQPGDLNYPSFSVVLNKTGRIMSVTYKRTLTNVGIARSTYAVKVSNPIGVEVIVQPPSLVFNELGQKRSFNVSFKAAIEASTLPSASSFGSLTWVSRKYAVRSPIAVTWQ 1151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 49229903 49243467 - Bma024320.1 Bma06g01211 84713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01211 1151 Gene3D Peptidase S8/S53 domain 309 420 IPR036852 GO:0004252|GO:0006508
Bma06g01211 1151 Gene3D Peptidase S8/S53 domain 977 1012 IPR036852 GO:0004252|GO:0006508
Bma06g01211 1151 Gene3D Peptidase S8/S53 domain 25 175 IPR036852 GO:0004252|GO:0006508
Bma06g01211 1151 CDD Peptidases_S8_3 580 801 IPR034197 -
Bma06g01211 1151 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 529 973 IPR045051 -
Bma06g01211 1151 Gene3D - 176 308 - -
Bma06g01211 1151 Gene3D - 804 920 - -
Bma06g01211 1151 ProSiteProfiles Serine proteases, subtilase domain profile. 569 999 - -
Bma06g01211 1151 Gene3D - 424 522 - -
Bma06g01211 1151 Gene3D - 1016 1150 - -
Bma06g01211 1151 Gene3D Peptidase S8/S53 domain 598 965 IPR036852 GO:0004252|GO:0006508
Bma06g01211 1151 ProSiteProfiles Serine proteases, subtilase domain profile. 1 407 - -
Bma06g01211 1151 Pfam Peptidase inhibitor I9 512 583 IPR010259 -
Bma06g01211 1151 ProSitePatterns Serine proteases, subtilase family, serine active site. 346 356 IPR023828 -
Bma06g01211 1151 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 975 1151 IPR045051 -
Bma06g01211 1151 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 529 973 - -
Bma06g01211 1151 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 975 1151 - -
Bma06g01211 1151 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 298 512 - -
Bma06g01211 1151 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 298 512 IPR045051 -
Bma06g01211 1151 Pfam Fibronectin type-III domain 457 509 IPR041469 -
Bma06g01211 1151 Pfam Fibronectin type-III domain 1046 1148 IPR041469 -
Bma06g01211 1151 CDD PA_subtilisin_like 810 913 - -
Bma06g01211 1151 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 306 IPR045051 -
Bma06g01211 1151 PRINTS Subtilisin serine protease family (S8) signature 45 58 IPR015500 -
Bma06g01211 1151 PRINTS Subtilisin serine protease family (S8) signature 345 361 IPR015500 -
Bma06g01211 1151 Pfam Subtilase family 597 963 IPR000209 GO:0006508|GO:0008236
Bma06g01211 1151 SUPERFAMILY Subtilisin-like 582 1003 IPR036852 GO:0004252|GO:0006508
Bma06g01211 1151 SUPERFAMILY Subtilisin-like 39 411 IPR036852 GO:0004252|GO:0006508
Bma06g01211 1151 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 22 306 - -
Bma06g01211 1151 CDD PA_subtilisin_like 183 306 - -
Bma06g01211 1151 Pfam Subtilase family 44 399 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00427 Bma-Chr5:13663105 Bma06g01211 Bma-Chr6:49229903 2.21E-101 dispersed
Bma06g01211 Bma-Chr6:49229903 Bma03g01131 Bma-Chr3:14970853 1.85E-92 dispersed
Bma06g01265 Bma-Chr6:49772104 Bma06g01211 Bma-Chr6:49229903 1.93E-08 dispersed
Bma07g01628 Bma-Chr7:51870529 Bma06g01211 Bma-Chr6:49229903 2.84E-17 dispersed
Bma06g01211 Bma-Chr6:49229903 Bma06g00357 Bma-Chr6:8683487 1.33E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01211 - - pop:7496586 820.461