Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01222 GTTTGTTTCCATCAGGGAACCTCTGCAGATTCATCAACTCCGTCGAAGATCGTCCTCTACTCTTTCTGGCAGAGCTCTTGCTGTTGGCGAGTCCGTTTCGCTCTGAATCTCAAAGGGCTTTCGTACGAGTACAGATCGGTAAACCTAGCAAAAGGTGAACAGCTTAGTCCAGAATTCGAGCGTTTAAACCCTCTTAAGTACGTCCCAGTATTAGTGGATGGGGATGTGGTTCTGTCAGACTCCTTTGCAATACTTCTGTATTTGGAAGAGAAGTATCATCAAAAACCACTCTTGCCTGCTGATCCTCAGCTTAGAGCTCTTAATCTTCAGGCTGCCAGTGTGGTTTCCTCTAGCATACAACCTCTAATTATGTTGGCCTTGCTGAAATCTATCGAGGAAAAAGTTGGTCCTGAAAAACAACAATTGTGGGCTCAGTCCACTATAGAACAAGGTTTTTCTGCTCTAGAGAAGTTGCTGAAGAATTTTGCTGGAACTTATTCCACTGGGGAAGAAGTGTATATGGCTGATGTGTTCTTGGCCCCCCAGATTGCTATTGCAATTACCACGTTCAAAATTGACATGTCCAAGTTCCCTCTTTTAGGAAGGATGTTTGAATCGTACAAGACCTTACCAGAATTCCAAGCTTCCCAGCCCGATAGACAACCCGATGCTTTGCAT 678 44.54 VCFHQGTSADSSTPSKIVLYSFWQSSCCWRVRFALNLKGLSYEYRSVNLAKGEQLSPEFERLNPLKYVPVLVDGDVVLSDSFAILLYLEEKYHQKPLLPADPQLRALNLQAASVVSSSIQPLIMLALLKSIEEKVGPEKQQLWAQSTIEQGFSALEKLLKNFAGTYSTGEEVYMADVFLAPQIAIAITTFKIDMSKFPLLGRMFESYKTLPEFQASQPDRQPDALH 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 49335042 49338645 - Bma031323 Bma06g01222 84724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01222 226 Pfam Glutathione S-transferase, N-terminal domain 19 96 IPR004045 -
Bma06g01222 226 ProSiteProfiles Glutaredoxin domain profile. 5 105 - -
Bma06g01222 226 Gene3D - 98 226 - -
Bma06g01222 226 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 8 225 - -
Bma06g01222 226 CDD GST_N_Zeta 17 89 IPR034333 -
Bma06g01222 226 SUPERFAMILY Thioredoxin-like 13 100 IPR036249 -
Bma06g01222 226 PANTHER MALEYLACETOACETATE ISOMERASE 8 225 - -
Bma06g01222 226 SFLD Glutathione Transferase (cytosolic) 18 205 IPR040079 -
Bma06g01222 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 101 226 IPR010987 -
Bma06g01222 226 TIGRFAM maiA: maleylacetoacetate isomerase 19 224 IPR005955 GO:0003824|GO:0005737|GO:0009072
Bma06g01222 226 SUPERFAMILY GST C-terminal domain-like 96 224 IPR036282 -
Bma06g01222 226 Gene3D Glutaredoxin 19 95 - -
Bma06g01222 226 CDD GST_C_Zeta 102 221 IPR034330 -
Bma06g01222 226 SFLD Main (cytGST) 18 205 - -
Bma06g01222 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 15 96 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01222 Bma-Chr6:49335042 Bma14g01714 Bma-Chr14:36288882 2.19E-92 dispersed
Bma06g01222 Bma-Chr6:49335042 Bma14g01643 Bma-Chr14:34753479 6.83E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01222 K01800 - rcu:8289177 320.857