Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g01222 | GTTTGTTTCCATCAGGGAACCTCTGCAGATTCATCAACTCCGTCGAAGATCGTCCTCTACTCTTTCTGGCAGAGCTCTTGCTGTTGGCGAGTCCGTTTCGCTCTGAATCTCAAAGGGCTTTCGTACGAGTACAGATCGGTAAACCTAGCAAAAGGTGAACAGCTTAGTCCAGAATTCGAGCGTTTAAACCCTCTTAAGTACGTCCCAGTATTAGTGGATGGGGATGTGGTTCTGTCAGACTCCTTTGCAATACTTCTGTATTTGGAAGAGAAGTATCATCAAAAACCACTCTTGCCTGCTGATCCTCAGCTTAGAGCTCTTAATCTTCAGGCTGCCAGTGTGGTTTCCTCTAGCATACAACCTCTAATTATGTTGGCCTTGCTGAAATCTATCGAGGAAAAAGTTGGTCCTGAAAAACAACAATTGTGGGCTCAGTCCACTATAGAACAAGGTTTTTCTGCTCTAGAGAAGTTGCTGAAGAATTTTGCTGGAACTTATTCCACTGGGGAAGAAGTGTATATGGCTGATGTGTTCTTGGCCCCCCAGATTGCTATTGCAATTACCACGTTCAAAATTGACATGTCCAAGTTCCCTCTTTTAGGAAGGATGTTTGAATCGTACAAGACCTTACCAGAATTCCAAGCTTCCCAGCCCGATAGACAACCCGATGCTTTGCAT | 678 | 44.54 | VCFHQGTSADSSTPSKIVLYSFWQSSCCWRVRFALNLKGLSYEYRSVNLAKGEQLSPEFERLNPLKYVPVLVDGDVVLSDSFAILLYLEEKYHQKPLLPADPQLRALNLQAASVVSSSIQPLIMLALLKSIEEKVGPEKQQLWAQSTIEQGFSALEKLLKNFAGTYSTGEEVYMADVFLAPQIAIAITTFKIDMSKFPLLGRMFESYKTLPEFQASQPDRQPDALH | 226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 49335042 | 49338645 | - | Bma031323 | Bma06g01222 | 84724 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g01222 | 226 | Pfam | Glutathione S-transferase, N-terminal domain | 19 | 96 | IPR004045 | - | |
Bma06g01222 | 226 | ProSiteProfiles | Glutaredoxin domain profile. | 5 | 105 | - | - | |
Bma06g01222 | 226 | Gene3D | - | 98 | 226 | - | - | |
Bma06g01222 | 226 | PANTHER | GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 | 8 | 225 | - | - | |
Bma06g01222 | 226 | CDD | GST_N_Zeta | 17 | 89 | IPR034333 | - | |
Bma06g01222 | 226 | SUPERFAMILY | Thioredoxin-like | 13 | 100 | IPR036249 | - | |
Bma06g01222 | 226 | PANTHER | MALEYLACETOACETATE ISOMERASE | 8 | 225 | - | - | |
Bma06g01222 | 226 | SFLD | Glutathione Transferase (cytosolic) | 18 | 205 | IPR040079 | - | |
Bma06g01222 | 226 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 101 | 226 | IPR010987 | - | |
Bma06g01222 | 226 | TIGRFAM | maiA: maleylacetoacetate isomerase | 19 | 224 | IPR005955 | GO:0003824|GO:0005737|GO:0009072 | |
Bma06g01222 | 226 | SUPERFAMILY | GST C-terminal domain-like | 96 | 224 | IPR036282 | - | |
Bma06g01222 | 226 | Gene3D | Glutaredoxin | 19 | 95 | - | - | |
Bma06g01222 | 226 | CDD | GST_C_Zeta | 102 | 221 | IPR034330 | - | |
Bma06g01222 | 226 | SFLD | Main (cytGST) | 18 | 205 | - | - | |
Bma06g01222 | 226 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 15 | 96 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g01222 | Bma-Chr6:49335042 | Bma14g01714 | Bma-Chr14:36288882 | 2.19E-92 | dispersed | |
Bma06g01222 | Bma-Chr6:49335042 | Bma14g01643 | Bma-Chr14:34753479 | 6.83E-14 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g01222 | K01800 | - | rcu:8289177 | 320.857 |