Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01250 ATGGAGGCGGAGACACTTTGGGTAGTGTTTGGCTGCGCGTTGGGAAGTCTGTTCCCTCTGATACTGCTGGCGAAGAATGTAAATTGGTGGTTTTACGAGAGGAAGTTGGGGAAGAAGCAGAGCTCTCTTCCTCCAGGCGATCTGGGCTGGCCTTTCATCGGCAATATGTGGTCTTTCCTCTCAGCTTTCCACTCCGACCGCCCTGATTCTTTCCTCTCCTCCCTCATCTCCAGATATGGACAGTCAGGGATCTACAGGGCGTTCATGTTCGGGAGCCCAAGCGTGATCGTCACCTCGCCGGAAACATGCAAGAGAGTTTTGACGGACGACAACTGTTTTCAGCCGGGGTGGCCCAAGTCCACCATGAAGCTCATCGGAGAGAAATCGTTCATCGGAATATCTGCTCAGGAACATAAGCGACTTCGCCGGTTGACGGCCGCCCCAATCAATGGCTACGAGGCCTTGTCTATGTACACCAAGTATATTGAGAAGAGCGTGACCGCTTCGCTGGAAAAATGGTCGGAAATGGGAGAGATAGAGTTCTTAACTCAGCTAAGGAAGCTTACTTTTCGGGTAATAATGTACATCTTCCTGAGCTCCGAGAGTGAGCCTGTAATGGAGACATTGGAGAGAGAATACACAAGGCTTAACTATGGAGTTAGAGCCATGGCTATTAATCTTCCTGGATTTGCCTACCACAATGCTCTAAAGGCTCGTAGAAATCTAGTGAGCGCGTTTCAATCGATCGTGACGGAGCGAAGAAAACGAAAGACGGAGGAGAAGACGGAGAAGCATGACATGATGGATGCCCTGCTCGAGGTTGAAGATGAAAATGGCAGAAAGTTGAGTGATGAGGAAATAATTGATGTTCTATTAATGTACTTAAATGCAGGCCATGAATCTTCTGGCCATATCACAATGTGGGCTACCATTTTCTTGCAAGACCATCCTCAATGTTTCAAGAAAGCTAAGGAAGAGCAGGAGGGGATCATTAAGAGGAGACCTTGTACACAAAAGAACCTCCGTCTAAGAGAAATTCGAGAAATGGAGTATCTTTCAAAGGTGATCGACGAAACTCTCCGTCTGATAACATTCTCGCTCGTCGTTTTCCGGGAGGCAAAAGCCGATGTGAAAATAAATGGTTATACAATCCCCAAGGGTTGGAAAGTTCTGGTTTGGTTCAGAAGTGTTCATTTGGATCCTCAAATCTTCCCAAATCCTGCAGAATTCAATCCTTCAAGATGGGATGATTTTGTTCCAAAAGCTGGATCTTTCCTTCCCTTTGGAGGAGGACTGAGACTATGTCCTGGCAGTGATCTTGCAAAGCTCGAAATCTCCATTTTTCTCCACCATTTTCTCCTCAATTATCAGTTAGTACAGACAAACCCAAAAGGCCAAGTTCAGTACTTGCCTCATACAAGGCCTAGAGATAATTGCTTGGCAAAAATCAAGAAAATTGACAAGATTAGAGATTAG 1476 46.14 MEAETLWVVFGCALGSLFPLILLAKNVNWWFYERKLGKKQSSLPPGDLGWPFIGNMWSFLSAFHSDRPDSFLSSLISRYGQSGIYRAFMFGSPSVIVTSPETCKRVLTDDNCFQPGWPKSTMKLIGEKSFIGISAQEHKRLRRLTAAPINGYEALSMYTKYIEKSVTASLEKWSEMGEIEFLTQLRKLTFRVIMYIFLSSESEPVMETLEREYTRLNYGVRAMAINLPGFAYHNALKARRNLVSAFQSIVTERRKRKTEEKTEKHDMMDALLEVEDENGRKLSDEEIIDVLLMYLNAGHESSGHITMWATIFLQDHPQCFKKAKEEQEGIIKRRPCTQKNLRLREIREMEYLSKVIDETLRLITFSLVVFREAKADVKINGYTIPKGWKVLVWFRSVHLDPQIFPNPAEFNPSRWDDFVPKAGSFLPFGGGLRLCPGSDLAKLEISIFLHHFLLNYQLVQTNPKGQVQYLPHTRPRDNCLAKIKKIDKIRD 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 49647104 49649960 - Bma024358.1 Bma06g01250 84752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01250 491 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 Pfam Cytochrome P450 44 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 PANTHER ENT-KAURENOIC ACID OXIDASE 2 17 485 - -
Bma06g01250 491 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 PANTHER CYTOCHROME P450 26 17 485 - -
Bma06g01250 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Bma06g01250 491 SUPERFAMILY Cytochrome P450 39 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma06g01250 491 Gene3D Cytochrome P450 33 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01172 Bma-Chr2:53878150 Bma06g01250 Bma-Chr6:49647104 0 dispersed
Bma06g00186 Bma-Chr6:2301856 Bma06g01250 Bma-Chr6:49647104 2.42E-109 dispersed
Bma06g01250 Bma-Chr6:49647104 Bma14g00142 Bma-Chr14:2038807 4.46E-162 dispersed
Bma06g01250 Bma-Chr6:49647104 Bma03g00991 Bma-Chr3:10712519 4.18E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01250 K04123 - qsu:111998301 746.117