Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01261 ATGGGCGGAAGGCCCAGTAGAGTAGGATTTGAGAGACCCAAAAGCATCGATTCCGTCATTTTTTCTCAGCTACCAAGCTCACCGAGCTCACTCGGAAGTCGGAAGCCTTCTCTCTCTCTTCTTTTTCCGACCTTGCGAGAGCCGAGCGACTCGACCGATTCAATTATGCTCCGCCGTGCCACCGCCGTTATTTCTCGAAGCGTTACGAATGCTAGGGCTCGACCTTTCTCCACCGATCTACCTGCCTCGCCGACGCTGGACTCGGCTTTTTCGGAGTCTTGGAAGAAGGTGATCCCCAATATTGATCCTCCGAAAACCCCTCTCTCTTTCATGAAGCCTAGACCTCCGACGCCTTCTTCTATTCCTTCTAAGCTCACTGTCAACTTTGTGCTCCCTTATGCTTCCGAGCTCTCTGCCAAGGAGGTTGACATGGTTATCATACCAGCAACAACTGGACAAATGGGTGTTCTTCCAGGCCATGTATCAACAATTGCAGAGTTAAGACCTGGTGTTCTATCAGTACACGAAGGGAATGAAGTGAAGAAGTATTTCATCAGCAGTGGCTTTGCATTCATCCATGCAAACTCTTTCGCTGATGTAATTGCTGTCGAGGCCGTGCCACTTGACCAGATCGACTCGAGCCTCGTGCAAAAGGGTCTTGCAGAATTCAACCAGAAGTTGAACTCAGCCGCTACAGATTTGGAGAAAGCTGAAGCTCAAATAGGAGTGGATGTGCACAGCGCTCTGAACTTTGCTCTGGCAGGCTAG 768 50.13 MGGRPSRVGFERPKSIDSVIFSQLPSSPSSLGSRKPSLSLLFPTLREPSDSTDSIMLRRATAVISRSVTNARARPFSTDLPASPTLDSAFSESWKKVIPNIDPPKTPLSFMKPRPPTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVSTIAELRPGVLSVHEGNEVKKYFISSGFAFIHANSFADVIAVEAVPLDQIDSSLVQKGLAEFNQKLNSAATDLEKAEAQIGVDVHSALNFALAG 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 49729178 49731721 + Bma024370.1 Bma06g01261 84763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01261 255 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 125 196 IPR020546 GO:0015986
Bma06g01261 255 Coils Coil 220 240 - -
Bma06g01261 255 CDD F1-ATPase_delta 125 248 IPR001469 GO:0015986|GO:0045261|GO:0046933
Bma06g01261 255 Gene3D - 212 253 - -
Bma06g01261 255 Hamap ATP synthase epsilon chain [atpC]. 123 243 IPR001469 GO:0015986|GO:0045261|GO:0046933
Bma06g01261 255 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 125 206 IPR036771 -
Bma06g01261 255 Gene3D - 115 211 IPR036771 -
Bma06g01261 255 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 56 255 IPR001469 GO:0015986|GO:0045261|GO:0046933
Bma06g01261 255 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 56 255 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01181 Bma06g01261 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01181 Bma-Chr2:53962972 Bma06g01261 Bma-Chr6:49729178 8.61E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01261 K02134 - tcc:18614544 339.732