Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g01261 | ATGGGCGGAAGGCCCAGTAGAGTAGGATTTGAGAGACCCAAAAGCATCGATTCCGTCATTTTTTCTCAGCTACCAAGCTCACCGAGCTCACTCGGAAGTCGGAAGCCTTCTCTCTCTCTTCTTTTTCCGACCTTGCGAGAGCCGAGCGACTCGACCGATTCAATTATGCTCCGCCGTGCCACCGCCGTTATTTCTCGAAGCGTTACGAATGCTAGGGCTCGACCTTTCTCCACCGATCTACCTGCCTCGCCGACGCTGGACTCGGCTTTTTCGGAGTCTTGGAAGAAGGTGATCCCCAATATTGATCCTCCGAAAACCCCTCTCTCTTTCATGAAGCCTAGACCTCCGACGCCTTCTTCTATTCCTTCTAAGCTCACTGTCAACTTTGTGCTCCCTTATGCTTCCGAGCTCTCTGCCAAGGAGGTTGACATGGTTATCATACCAGCAACAACTGGACAAATGGGTGTTCTTCCAGGCCATGTATCAACAATTGCAGAGTTAAGACCTGGTGTTCTATCAGTACACGAAGGGAATGAAGTGAAGAAGTATTTCATCAGCAGTGGCTTTGCATTCATCCATGCAAACTCTTTCGCTGATGTAATTGCTGTCGAGGCCGTGCCACTTGACCAGATCGACTCGAGCCTCGTGCAAAAGGGTCTTGCAGAATTCAACCAGAAGTTGAACTCAGCCGCTACAGATTTGGAGAAAGCTGAAGCTCAAATAGGAGTGGATGTGCACAGCGCTCTGAACTTTGCTCTGGCAGGCTAG | 768 | 50.13 | MGGRPSRVGFERPKSIDSVIFSQLPSSPSSLGSRKPSLSLLFPTLREPSDSTDSIMLRRATAVISRSVTNARARPFSTDLPASPTLDSAFSESWKKVIPNIDPPKTPLSFMKPRPPTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVSTIAELRPGVLSVHEGNEVKKYFISSGFAFIHANSFADVIAVEAVPLDQIDSSLVQKGLAEFNQKLNSAATDLEKAEAQIGVDVHSALNFALAG | 255 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 49729178 | 49731721 | + | Bma024370.1 | Bma06g01261 | 84763 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g01261 | 255 | Pfam | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | 125 | 196 | IPR020546 | GO:0015986 | |
Bma06g01261 | 255 | Coils | Coil | 220 | 240 | - | - | |
Bma06g01261 | 255 | CDD | F1-ATPase_delta | 125 | 248 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Bma06g01261 | 255 | Gene3D | - | 212 | 253 | - | - | |
Bma06g01261 | 255 | Hamap | ATP synthase epsilon chain [atpC]. | 123 | 243 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Bma06g01261 | 255 | SUPERFAMILY | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 125 | 206 | IPR036771 | - | |
Bma06g01261 | 255 | Gene3D | - | 115 | 211 | IPR036771 | - | |
Bma06g01261 | 255 | PANTHER | ATP SYNTHASE DELTA/EPSILON CHAIN | 56 | 255 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Bma06g01261 | 255 | PANTHER | ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL | 56 | 255 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma02g01181 | Bma06g01261 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01181 | Bma-Chr2:53962972 | Bma06g01261 | Bma-Chr6:49729178 | 8.61E-135 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g01261 | K02134 | - | tcc:18614544 | 339.732 |