Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01265 ATGCTCACACTGCAGACCACAAGATCATGGGACTTCATGGGATTGCCTCTTCTCGTTAAGAGAATGCCGGCCGTTGAGAGCGATATGATAATTGGCATGATTGACTCGGGAATCTCGCCGGATTCCGAGAGTTTTAACGACAAAGGATTCGGCCCTCCTCCGATGAAATGGAAGGGCTCATGTGAAGCCAACTTCACTTGTAACAAGGATTGCGAAGATTCTTGCCTAGACAGCAAGTTAGTGAAAGACAAGATCGTCGTATGTAGACTGCCAACTGGAAAAGTAGAAGCTGCTCGAGCTGGTGCAGTAGCAGCCATCTACACCGACGATTTAACTGCTAGAATAGAGGCTGTTCGAGCCGATGCCGTGGCGGCCTTCAACACGGACGATTCAAGAGAAGCTTTGTCTATCGAACCCTTACCTGCAGCATGCGTGGACTTGAACACACTGAATGGAGTAATAGACTACGTTAATTCTACAAAAAACCCTTATGGGTATATAGCTAAGAGTACGAGTCTCAAAGATGGATCAGCTCCTATGCCTGCTGGGTACAGTTCTCGTGGACCAAACTTTTATGTTGAAGATATTCTCAAGCCAGACATAAGCGCGCCAGGGACTTCAATCTTGGCTGCTTTTTCAACTCTCATGTCGCCATCAATGGTTTCATACGACACGAGAAGAGTTAAATACAGTATTTTATCAGGAACTTCAATGGCTGCCCCTCACGTTGCCGGAGCAGCTGCTTATGTCAAAACATTCCACCCCAACTGGTCGGCCTCCGCCATTAAATCCGCCCTCATGACGACTGCTTCACGAATGAACGATGGACCGAATGATCCTCACTATTCCGAGGCTGAATTTGCATATGGGTCTGGTTTAATGAACCCCATCAGAGCTATTGATCCTGGGCTAGTTTATGAAATCCCCACGGAAGACTACCTTAAAATAGTGTGCTCGATGAATATAACTTCCTACGGAAAGTGCCCCAGAGAAGCCATCGGAGCGTCTCAGAGAGATCTCAACTACCCGTCAATGCAGGGTCTGGTGAAGAAGAGCGACCCAGTTAGCGTAACATTCAGAAGAAGGGTGAAGAACGTTGGCGAAGCCATTTCTACATATAAAGCCGAGGTGAAGGCGCCGGGGGGTATTGAGGTGGTGGTGAAGCCAATGGTGTTGTCTTTTGAGGCGTTGAATCAGGAGCTGTCGTTTGAGGTGACGGTGACTGGGCCGCCATTGAAGACGCCGGAAAGAGCTTCTGCAAGTCTGGTGTGGTCCAATGGTTTGCACAACAATAAGGATGTTTATATTGTATATATGGGATCACTACCAGAGAATGATGATGAATATTCTCCGTTGTCTCACCATGTCAGCATTCTTCAAGATGTTCTAGGCGATGGTTTCCGACACGATTCCTTGGTCAGAACATACGGAAGGAGCTTCAACGGCTTCGCAGCATGGCTAAGCGAGGAAGAAAGAGAGAGAATGGCTGCTAGAGATGATATAATGTCAATATTTCCAAGGCAGAGGCTCACACTTCAGACCACAAGATCATGGGACTTCATGGGATTGCCTCTCCTCGTTAAGAGAATGCCGGCCGTTGAGAACGATATTATAATTGGCATCATTGACTCCGGAATCTCGCCGGATTCCGAGAGTTTTAATGACAAAGGATTCGGCCCTCCTCCAAAGAAATGGAAGGGCTCGTGCGACGCCAACTTCACTTGTAACAATAAGATTATTGGAGCTAGAGGTTACTCTTATGGCGACCCTACAGATAAGGTAGGTCACGGAACCCACACGGCCTCGACTACAGCCGGAAACGTAGTCGCTGGAGCAAACTTTTACGGAGTTGCCGGCGGAATCGCAAGAGGCGGTGTTCCGTCTGCAAGAATTGCAGTGTATAAAGGGTGTTCTACTTTTTGTTCTACAGAAGATCTTTTGAAGTCCTTTGATGATGCAATCGCCGACGGAGTCGATATTATATCGATTTCAGTTGGTGGAGTTCCGGTTCAGTTGGCTTTTGACGTTATTGCCATTGGATCCTTTCATGCAATGCAGAAAAATGTGCTCACTGTCAACTCCGCAGGAAATAGTGGTCCTCTGGAATCGACTACCGGTAGTACTGCACCATGGATGTTAACGGTCGGAGCGAGTACGACGGATCGGGATATCAGAGATAAGATTGTTCTTGGCAATGGAAAGTCATTTTTTGGACACTCCATCAATGGGTTTACTCTCAATGGAACAAACTACCCTTTAATCTACGGAAAGAGCGTTACAACTACATATGCGTCTAACTTTTGCTCGACTGTAATCAGGAATTGTGAAGATTTTTGCCTGGACAGCAAGTTAGTGAAAGACAAGATCGTCGTGTGTGGACAGGCAAGTGGACAAGTAGAAGCTGCTCGAGCTGGTGCAGCAGCAGTCATCTATACTGCTAATTTAAGTGGAGAACTTTCCTTTGTAGAACCCTTACCTGCAGCAAATGTGGACAGGGACACATTCAAGGCAGTAACAGACTACATTACTTCTACAAAAAACCCTTATGGGTATATAGCTAAAAGTAGGAGTTTCAAAGATAGATCAGCTCCTGTGCTTTCTTGGTACTCTTCTCGCGGACCAAACCCTGTTGTTGAAGAAATTCTTAAGCCAGACATAAGCGCACCAGGGACAACGATCTTGGCTGCTTTTTCACCTCTTCAGCCGCCATCAATGGTTTCATACGACAAAAGAAGAGTTAAATACAACATTTTATCAGGAACTTCAATGGCTGCCCCTCACGTTGCCGGAGCAGCTGCTTATATCAAAACATTCCACCCCAACTGGTCGGCTTCCGCCATTAAATCCGCCCTCATGACGACTGCTTCACGAATGAACGATGGAGCGCATGAAGCTGACTATGCCGACGGTGAATTTGCATATGGGTCTGGTTTTATGAACCCGGTCAAAGCTATTAAGCCTGGATTAATTTATGAAACCTCCATGGAAGACTACCTTAAACTGTTGTGCTCAATGAATATAACTTCTTTCGGAAAGTGCCCCAGAGCAGCCATTGGAGCGTCTCAGAGAGATCTCAACTACCCATCGATGCATGCTCTGGTTGAGATCAACAAGCCATTTAGCGTAACATTCAGAAGAACAGTGAAGAACGTTGGCAAAGCCAATTCTACATATAAAGCCAAGGTGAAGGCAGCGGGTGGTCTTAAGGTTGTCGTGAAGCCGAAGGCGTTGTCTTTTAAAGCGTTGGATCAGGAGCTTTCGTACGTGGTGACTGTGACCGGGCCGCCATTGGAGAGCCTGAAAAGAGCTTCTGCAAGTCTGGTGTGGTCCGATGGTTGGCACAAAGTGAGAAGTCCTATTGTTGTCTACACAAAAAGTCCTCAGGTTTGA 3390 46.7 MLTLQTTRSWDFMGLPLLVKRMPAVESDMIIGMIDSGISPDSESFNDKGFGPPPMKWKGSCEANFTCNKDCEDSCLDSKLVKDKIVVCRLPTGKVEAARAGAVAAIYTDDLTARIEAVRADAVAAFNTDDSREALSIEPLPAACVDLNTLNGVIDYVNSTKNPYGYIAKSTSLKDGSAPMPAGYSSRGPNFYVEDILKPDISAPGTSILAAFSTLMSPSMVSYDTRRVKYSILSGTSMAAPHVAGAAAYVKTFHPNWSASAIKSALMTTASRMNDGPNDPHYSEAEFAYGSGLMNPIRAIDPGLVYEIPTEDYLKIVCSMNITSYGKCPREAIGASQRDLNYPSMQGLVKKSDPVSVTFRRRVKNVGEAISTYKAEVKAPGGIEVVVKPMVLSFEALNQELSFEVTVTGPPLKTPERASASLVWSNGLHNNKDVYIVYMGSLPENDDEYSPLSHHVSILQDVLGDGFRHDSLVRTYGRSFNGFAAWLSEEERERMAARDDIMSIFPRQRLTLQTTRSWDFMGLPLLVKRMPAVENDIIIGIIDSGISPDSESFNDKGFGPPPKKWKGSCDANFTCNNKIIGARGYSYGDPTDKVGHGTHTASTTAGNVVAGANFYGVAGGIARGGVPSARIAVYKGCSTFCSTEDLLKSFDDAIADGVDIISISVGGVPVQLAFDVIAIGSFHAMQKNVLTVNSAGNSGPLESTTGSTAPWMLTVGASTTDRDIRDKIVLGNGKSFFGHSINGFTLNGTNYPLIYGKSVTTTYASNFCSTVIRNCEDFCLDSKLVKDKIVVCGQASGQVEAARAGAAAVIYTANLSGELSFVEPLPAANVDRDTFKAVTDYITSTKNPYGYIAKSRSFKDRSAPVLSWYSSRGPNPVVEEILKPDISAPGTTILAAFSPLQPPSMVSYDKRRVKYNILSGTSMAAPHVAGAAAYIKTFHPNWSASAIKSALMTTASRMNDGAHEADYADGEFAYGSGFMNPVKAIKPGLIYETSMEDYLKLLCSMNITSFGKCPRAAIGASQRDLNYPSMHALVEINKPFSVTFRRTVKNVGKANSTYKAKVKAAGGLKVVVKPKALSFKALDQELSYVVTVTGPPLESLKRASASLVWSDGWHKVRSPIVVYTKSPQV 1129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 49772104 49780371 - Bma024375.3 Bma06g01265 84767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01265 1129 Gene3D - 314 438 - -
Bma06g01265 1129 Gene3D - 999 1125 - -
Bma06g01265 1129 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 434 1124 - -
Bma06g01265 1129 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 69 430 - -
Bma06g01265 1129 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 2 69 - -
Bma06g01265 1129 SUPERFAMILY Subtilisin-like 26 301 IPR036852 GO:0004252|GO:0006508
Bma06g01265 1129 ProSitePatterns Serine proteases, subtilase family, serine active site. 920 930 IPR023828 -
Bma06g01265 1129 Pfam Subtilase family 535 965 IPR000209 GO:0006508|GO:0008236
Bma06g01265 1129 Gene3D - 721 859 - -
Bma06g01265 1129 Gene3D Peptidase S8/S53 domain 6 87 IPR036852 GO:0004252|GO:0006508
Bma06g01265 1129 Gene3D Peptidase S8/S53 domain 104 313 IPR036852 GO:0004252|GO:0006508
Bma06g01265 1129 ProSitePatterns Serine proteases, subtilase family, serine active site. 235 245 IPR023828 -
Bma06g01265 1129 ProSiteProfiles Serine proteases, subtilase domain profile. 1 300 - -
Bma06g01265 1129 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 539 549 IPR023827 -
Bma06g01265 1129 CDD PA_subtilisin_like 728 848 - -
Bma06g01265 1129 SUPERFAMILY Subtilisin-like 512 989 IPR036852 GO:0004252|GO:0006508
Bma06g01265 1129 Pfam Subtilase family 160 278 IPR000209 GO:0006508|GO:0008236
Bma06g01265 1129 Gene3D Peptidase S8/S53 domain 536 998 IPR036852 GO:0004252|GO:0006508
Bma06g01265 1129 ProSiteProfiles Serine proteases, subtilase domain profile. 517 985 - -
Bma06g01265 1129 PRINTS Subtilisin serine protease family (S8) signature 592 605 IPR015500 -
Bma06g01265 1129 PRINTS Subtilisin serine protease family (S8) signature 534 553 IPR015500 -
Bma06g01265 1129 PRINTS Subtilisin serine protease family (S8) signature 919 935 IPR015500 -
Bma06g01265 1129 Pfam Peptidase inhibitor I9 434 511 IPR010259 -
Bma06g01265 1129 Pfam Fibronectin type-III domain 1024 1122 IPR041469 -
Bma06g01265 1129 Pfam Fibronectin type-III domain 339 430 IPR041469 -
Bma06g01265 1129 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 434 1124 IPR045051 -
Bma06g01265 1129 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 69 430 IPR045051 -
Bma06g01265 1129 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 69 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01265 Bma-Chr6:49772104 Bma06g01211 Bma-Chr6:49229903 1.93E-08 dispersed
Bma06g01265 Bma-Chr6:49772104 Bma10g00711 Bma-Chr10:10836447 1.01E-10 transposed
Bma06g01265 Bma-Chr6:49772104 Bma10g00670 Bma-Chr10:9680849 9.11E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01265 - - qlo:115983940 763.837