Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01283 ATGCTTTCTGGGTTCTCTCAGGAAAGTTCGAGAATGTATTCGGCCCTCCACTCTCTCCCGCTCGACGTCAAGATTCAGGGATCTTTGGAAGGAACCAACTTGCCCGGGGACGCTTGTTTGGTTCTTTCTTCTGATCCTAAACCCCGCCTCCGGTGGACGGCGGAGCTCCACGAGAGATTCGTTGACGCTGTAACTCAGCTTGGTGGCCCTGAAAAAGCAACACCTAAGACTATTATGAGGACAATGGGAGTAAAAGGCTTGACACTTTATCACTTGAAATCGCACCTCCAGAAATACCGGTTGGGGAAGCAATCAAGCAAGGAATTTGCAGAGACTATGAAGGATGGGTCTAGCATTTCACAAAATCCGGACTCTACTTCCTCGCCTCTAACATCGCCGAGAATGATACCACAAGACGTGAACGATGGTTATCAGGTAACCGAGGCTTTGCGCGTTCAAATGGAAGTTCAGAGAAGACTACACGAGAAGCTGGAGGTGCAGCGCCGGCTTCAAATTCGAATTGAAGCACAAGGAAAATACCTGCAAACGATCCTCGAGAAAGCATGTCAAGCTGTGAGTGATCAAGCTGCTGCCTCAGCCGGGCTCGAATCTGCAAGGGAAGAGCTGTCTGAGTTGGCAATTCAGGTTTCGACCAATTATCTAGGAATGGGCTCGAATGACACCCTCAAAATGCCATCTTTGTCAGAACTCTCCGCAGCTCTCGAAAATCGAAATGCTCCTCCCAATATTCCTTCTCGCATGGGCGATTGCTCAGTGGAGAGCTGCTTGTCATCGGCTGGAAGCCCCGTTTCTTCGATGGGAATCGGCTCAACGACTGCAGTAATGGAGAAAAGACCGAAATCATTGTTCGGAAACAGGGACTCGTTGCCTTTGGACCCGAACATTCGACACGAGATCGAATGGATGATGACAAACATTGGATGA 945 49.42 MLSGFSQESSRMYSALHSLPLDVKIQGSLEGTNLPGDACLVLSSDPKPRLRWTAELHERFVDAVTQLGGPEKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSSKEFAETMKDGSSISQNPDSTSSPLTSPRMIPQDVNDGYQVTEALRVQMEVQRRLHEKLEVQRRLQIRIEAQGKYLQTILEKACQAVSDQAAASAGLESAREELSELAIQVSTNYLGMGSNDTLKMPSLSELSAALENRNAPPNIPSRMGDCSVESCLSSAGSPVSSMGIGSTTAVMEKRPKSLFGNRDSLPLDPNIRHEIEWMMTNIG 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 49912101 49914873 - Bma024391.1 Bma06g01283 84785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01283 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 311 IPR044848 GO:0003700
Bma06g01283 314 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Bma06g01283 314 MobiDBLite consensus disorder prediction 110 136 - -
Bma06g01283 314 Pfam MYB-CC type transfactor, LHEQLE motif 145 190 IPR025756 -
Bma06g01283 314 Pfam Myb-like DNA-binding domain 50 100 IPR001005 -
Bma06g01283 314 MobiDBLite consensus disorder prediction 111 135 - -
Bma06g01283 314 Gene3D - 46 104 - -
Bma06g01283 314 PANTHER PROTEIN PHR1-LIKE 2 12 311 - -
Bma06g01283 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Bma06g01283 314 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01204 Bma06g01283 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01283 Bma-Chr6:49912101 Bma12g00569 Bma-Chr12:24779078 6.86E-66 dispersed
Bma04g01408 Bma-Chr4:48817709 Bma06g01283 Bma-Chr6:49912101 1.95E-66 transposed
Bma06g00696 Bma-Chr6:37096533 Bma06g01283 Bma-Chr6:49912101 2.55E-55 transposed
Bma10g00012 Bma-Chr10:220723 Bma06g01283 Bma-Chr6:49912101 6.48E-63 transposed
Bma11g00043 Bma-Chr11:576963 Bma06g01283 Bma-Chr6:49912101 1.47E-70 transposed
Bma14g01649 Bma-Chr14:34968952 Bma06g01283 Bma-Chr6:49912101 2.85E-50 transposed
Bma02g01204 Bma-Chr2:54120400 Bma06g01283 Bma-Chr6:49912101 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57518 PF00249 Myb_DNA-binding 2.70E-07 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01283 - - rcu:8280672 429.869