Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01356 CTGATTTTTCTCTCATGGGTTTTCTCCTTGCAGCTCTATGGCGAACACTGGGAAATGGGTTTTTCAGAGCAGGGATTATTAGCTAACACTGAACAAGACGAAGATATATTTTCATCTGGGTTGGAAAATAGAATGCCGTTTTTGCAGATGTTACAGGAAGCTCCGCCATTGTTACCCTTTAAAGAGCTCGGATTTCAAACTTTGCTGAAATTGCAGCATTTCAGGGATCCATGGGAGGTCGACAAGCTGATAATGGGAGAAAAAATTCAAACTTTCGAACTAGAAAGCTGTGTGACCCACGATCTGATGGACTTGCATTCCCCCAATAAATCAGAAAGCAATCAAATTGGATCGAACGAAGAGAAAAATTGTTTGAGAGAAGGAAGAACTAGTTCGAAGCAGACCCAGCTGGGGAAATCTGCAGTTCTAGTGAGAGAAAAAAGAAAGAGAAAGAGAGCGAAGCCATTGAAGAACGAGGAAGAAGTAGAGAGCCAAAGAATGACCCACATTGCAGTTGAGAGAAACCGGAGACGACAAATGAACGATCATCTCAACGTTCTTCGCTCTCTAATGCCGTCTTCTTACATTCAAAGAGTAAGGATTTTCTCGCATTTTCTCTACCATTTTCTCACTGACCAAACACTTTTTATCTTTTTTCAAAAGGGTGATCAAGCGTCAATCATCGGAGGAGCGATAAACTTCGTGAAAGAACTCGAACAACTCCTCCATTCTCTCGAGTCGCATCGAAGAACAAGAAACCCAGAAGGAAGCAGCTCTGCGAAAAACCAGTCTTCAGCTTCGTCCTCTTCCTCCGCCATAGCAATGGCTTCCAACGGCTTCTTCATGTCTCTCTCTCAGCACAGAATTCCTTCAGACGACCAAGTCAAGGAAACCAGCTTGAAAGAACGAAGAATCGGAGACGGAGTAACCGCCGAAAACAAATCGGAAACGGCAGATATTGAAGTGACAGTGATTCAAACCCACGTAAACTTGAAAATTCAGTGCGAGAGAAGGCCGAGACAGTTGGTGAAAGCCATTGTTGCACTCGAAGAGCTTAAGCTCACTGTTCTTCACCTCAACGTCACCACCTCACAATCTACAGTTTTTTATTCCTTCAATCTCAAGATAGAAGATGACTGCAAACTAAGGTCAGCGGACGAGATAGCAGGATCAGTGCATCAAATTTTCAGCTACATCAACGGTAGATAA 1209 43.34 LIFLSWVFSLQLYGEHWEMGFSEQGLLANTEQDEDIFSSGLENRMPFLQMLQEAPPLLPFKELGFQTLLKLQHFRDPWEVDKLIMGEKIQTFELESCVTHDLMDLHSPNKSESNQIGSNEEKNCLREGRTSSKQTQLGKSAVLVREKRKRKRAKPLKNEEEVESQRMTHIAVERNRRRQMNDHLNVLRSLMPSSYIQRVRIFSHFLYHFLTDQTLFIFFQKGDQASIIGGAINFVKELEQLLHSLESHRRTRNPEGSSSAKNQSSASSSSSAIAMASNGFFMSLSQHRIPSDDQVKETSLKERRIGDGVTAENKSETADIEVTVIQTHVNLKIQCERRPRQLVKAIVALEELKLTVLHLNVTTSQSTVFYSFNLKIEDDCKLRSADEIAGSVHQIFSYINGR 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 50447526 50448862 + Bma024469.1 Bma06g01356 84858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01356 402 SMART finulus 170 244 IPR011598 GO:0046983
Bma06g01356 402 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 238 IPR011598 GO:0046983
Bma06g01356 402 Pfam Helix-loop-helix DNA-binding domain 165 239 IPR011598 GO:0046983
Bma06g01356 402 MobiDBLite consensus disorder prediction 248 268 - -
Bma06g01356 402 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 252 IPR036638 GO:0046983
Bma06g01356 402 MobiDBLite consensus disorder prediction 106 141 - -
Bma06g01356 402 PANTHER MAX DIMERIZATION, MAD 21 198 - -
Bma06g01356 402 PANTHER TRANSCRIPTION FACTOR BHLH70 21 198 - -
Bma06g01356 402 PANTHER MAX DIMERIZATION, MAD 218 401 - -
Bma06g01356 402 Gene3D - 157 253 IPR036638 GO:0046983
Bma06g01356 402 PANTHER TRANSCRIPTION FACTOR BHLH70 218 401 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01206 Bma06g01356 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01206 Bma-Chr2:54127610 Bma06g01356 Bma-Chr6:50447526 2.51E-57 dispersed
Bma06g01356 Bma-Chr6:50447526 Bma14g01286 Bma-Chr14:23293160 3.49E-54 dispersed
Bma06g01356 Bma-Chr6:50447526 Bma10g01281 Bma-Chr10:45397082 5.17E-31 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57526 PF00010 HLH 1.00E-08 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01356 - - zju:107423782 365.155