Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g01369 | ATGAGCATTGTTAATAGCTGCGCTAGTACATATAGGAGTGATGCAATAACAAGTGATGGCATGCTTAGTGTGGAGAGAAACTGTGAGAGTACTAAAGGAAGTGTGAGAGGGGATTCACTTGAGAGTGCCAAAACAAGTATGAGCCGAGCAAGTGATAGTAGTGGTCTTAGTGATGATAGTAGCTGGAGCAAAATTACTGGAAGTGCTAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCTATTCGAGCAAGAGATGGGATTTTGGGCATGAGTCACTTTAGATTGCTTAAAAGACTTGGATGTGGGGACATTGGCAGTGTCTATCTCTCAGAATTGAGTGCAACTCGCTGCTACTTTGCAATGAAAGTAATGGACAAGGCATCCCTTGCTAGTAGGAAGAAGTTGACGAGAGCTCAAACAGAAAGGGAAATTCTACAGTTACTGGATCATCCATTTCTACCTACCTTATACACTCATTTTGAAACCGACAGATTCTCATGTTTGGTCATGGAGTATTGTCCAGGGGGCGACCTGCACACTTTAAGACAACGGCAACCAGGGAAACATTTCTCTGAGTATGCTGCAAGATTTTATGCTGCTGAGGTTCTGCTGGCACTCGAGTATCTTCACATGCTTGGAGTTGTCTATCGAGACTTGAAACCTGAAAATGTACTGGTCCGTGATGATGGCCACATTATGCTCTCTGATTTTGACCTATCACTAAGATGTGCTGTTTCCCCTACCCTCGTACGATCCTCATTTGACTCTGACCCTTCCAAACGCGGTGCTGGAGGTGCATTCTGTGTTCAACCTGCCTGCATTGAGCCCACATCTGTATGCATCCAACCCGCTTGTTTTCTTCCCCGAATCTTCCCCCAAAAGAGCAAGAAAAAAAGCCAAAGGCCTCGAACTGAGCTTGGACTACTAGGCAACACCCTTCCTGAGCTTGTTGCCGAGCCTACTGCAGCCCGTTCGATGTCATTCGTCGGAACGCATGAATACCTAGCCCCAGAAATTATCAAAGGAGAGGGTCATGGAAGTGCTGTTGATTGGTGGACATTTGGCATTTTCTTGCACGAACTACTCTATGGTAAAACTCCATTCAAAGGCTCCGGAAATCGAGCCACACTTTTCAATGTGGTCGGCCAGCAACTCAAGTTCACTGAATCTCCAGCAACTAGCTATGCAAGCCGAGATCTAATAAGAGCTCTGCTAGTGAAAGAGCCACAAGATCGTTTAGGAGTTAAAAGGGGTGCAACCGAAATAAAGCAGCACCCTTTCTTTGAAGGTGTCAATTGGGCTTTGATTAGATGCAGTACGCCTCCAGAGGTGCCTAGACCCGTGGAGACCGAACCTGCTGCCAAACACAGCGCAGTTGACTCAATCGGCGTCGGAAGCAGCAGTAAGAGGATGGTAGGGACGGATGTGAAATCTGGGGGTAAATATCTCGACTTTGAGTTCTTTTGA | 1482 | 46.29 | MSIVNSCASTYRSDAITSDGMLSVERNCESTKGSVRGDSLESAKTSMSRASDSSGLSDDSSWSKITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVRSSFDSDPSKRGAGGAFCVQPACIEPTSVCIQPACFLPRIFPQKSKKKSQRPRTELGLLGNTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFTESPATSYASRDLIRALLVKEPQDRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVETEPAAKHSAVDSIGVGSSSKRMVGTDVKSGGKYLDFEFF | 493 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 50522493 | 50524670 | + | Bma024481.1 | Bma06g01369 | 84871 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g01369 | 493 | Pfam | Protein kinase domain | 99 | 249 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g01369 | 493 | Pfam | Protein kinase domain | 330 | 433 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g01369 | 493 | SMART | serkin_6 | 98 | 433 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g01369 | 493 | PANTHER | FLIPPASE KINASE 1-RELATED | 1 | 493 | - | - | |
Bma06g01369 | 493 | Gene3D | Phosphorylase Kinase; domain 1 | 96 | 181 | - | - | |
Bma06g01369 | 493 | Gene3D | Transferase(Phosphotransferase) domain 1 | 329 | 451 | - | - | |
Bma06g01369 | 493 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 219 | 231 | IPR008271 | GO:0004672|GO:0006468 | |
Bma06g01369 | 493 | SUPERFAMILY | Protein kinase-like (PK-like) | 80 | 460 | IPR011009 | - | |
Bma06g01369 | 493 | ProSiteProfiles | Protein kinase domain profile. | 98 | 433 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g01369 | 493 | CDD | STKc_phototropin_like | 96 | 452 | - | - | |
Bma06g01369 | 493 | Gene3D | Transferase(Phosphotransferase) domain 1 | 182 | 249 | - | - | |
Bma06g01369 | 493 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 1 | 493 | - | - | |
Bma06g01369 | 493 | MobiDBLite | consensus disorder prediction | 28 | 70 | - | - | |
Bma06g01369 | 493 | MobiDBLite | consensus disorder prediction | 28 | 75 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g01369 | Bma-Chr6:50522493 | Bma13g01124 | Bma-Chr13:44342261 | 0 | dispersed | |
Bma08g00829 | Bma-Chr8:46131513 | Bma06g01369 | Bma-Chr6:50522493 | 8.36E-130 | dispersed | |
Bma11g00144 | Bma-Chr11:1284540 | Bma06g01369 | Bma-Chr6:50522493 | 2.03E-105 | dispersed | |
Bma06g01369 | Bma-Chr6:50522493 | Bma14g00904 | Bma-Chr14:10219310 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66560 | PF00069 | Pkinase | 3.70E-37 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g01369 | - | - | rcu:8277440 | 902.894 |