Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01369 ATGAGCATTGTTAATAGCTGCGCTAGTACATATAGGAGTGATGCAATAACAAGTGATGGCATGCTTAGTGTGGAGAGAAACTGTGAGAGTACTAAAGGAAGTGTGAGAGGGGATTCACTTGAGAGTGCCAAAACAAGTATGAGCCGAGCAAGTGATAGTAGTGGTCTTAGTGATGATAGTAGCTGGAGCAAAATTACTGGAAGTGCTAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCTATTCGAGCAAGAGATGGGATTTTGGGCATGAGTCACTTTAGATTGCTTAAAAGACTTGGATGTGGGGACATTGGCAGTGTCTATCTCTCAGAATTGAGTGCAACTCGCTGCTACTTTGCAATGAAAGTAATGGACAAGGCATCCCTTGCTAGTAGGAAGAAGTTGACGAGAGCTCAAACAGAAAGGGAAATTCTACAGTTACTGGATCATCCATTTCTACCTACCTTATACACTCATTTTGAAACCGACAGATTCTCATGTTTGGTCATGGAGTATTGTCCAGGGGGCGACCTGCACACTTTAAGACAACGGCAACCAGGGAAACATTTCTCTGAGTATGCTGCAAGATTTTATGCTGCTGAGGTTCTGCTGGCACTCGAGTATCTTCACATGCTTGGAGTTGTCTATCGAGACTTGAAACCTGAAAATGTACTGGTCCGTGATGATGGCCACATTATGCTCTCTGATTTTGACCTATCACTAAGATGTGCTGTTTCCCCTACCCTCGTACGATCCTCATTTGACTCTGACCCTTCCAAACGCGGTGCTGGAGGTGCATTCTGTGTTCAACCTGCCTGCATTGAGCCCACATCTGTATGCATCCAACCCGCTTGTTTTCTTCCCCGAATCTTCCCCCAAAAGAGCAAGAAAAAAAGCCAAAGGCCTCGAACTGAGCTTGGACTACTAGGCAACACCCTTCCTGAGCTTGTTGCCGAGCCTACTGCAGCCCGTTCGATGTCATTCGTCGGAACGCATGAATACCTAGCCCCAGAAATTATCAAAGGAGAGGGTCATGGAAGTGCTGTTGATTGGTGGACATTTGGCATTTTCTTGCACGAACTACTCTATGGTAAAACTCCATTCAAAGGCTCCGGAAATCGAGCCACACTTTTCAATGTGGTCGGCCAGCAACTCAAGTTCACTGAATCTCCAGCAACTAGCTATGCAAGCCGAGATCTAATAAGAGCTCTGCTAGTGAAAGAGCCACAAGATCGTTTAGGAGTTAAAAGGGGTGCAACCGAAATAAAGCAGCACCCTTTCTTTGAAGGTGTCAATTGGGCTTTGATTAGATGCAGTACGCCTCCAGAGGTGCCTAGACCCGTGGAGACCGAACCTGCTGCCAAACACAGCGCAGTTGACTCAATCGGCGTCGGAAGCAGCAGTAAGAGGATGGTAGGGACGGATGTGAAATCTGGGGGTAAATATCTCGACTTTGAGTTCTTTTGA 1482 46.29 MSIVNSCASTYRSDAITSDGMLSVERNCESTKGSVRGDSLESAKTSMSRASDSSGLSDDSSWSKITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVRSSFDSDPSKRGAGGAFCVQPACIEPTSVCIQPACFLPRIFPQKSKKKSQRPRTELGLLGNTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFTESPATSYASRDLIRALLVKEPQDRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVETEPAAKHSAVDSIGVGSSSKRMVGTDVKSGGKYLDFEFF 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 50522493 50524670 + Bma024481.1 Bma06g01369 84871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01369 493 Pfam Protein kinase domain 99 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01369 493 Pfam Protein kinase domain 330 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01369 493 SMART serkin_6 98 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01369 493 PANTHER FLIPPASE KINASE 1-RELATED 1 493 - -
Bma06g01369 493 Gene3D Phosphorylase Kinase; domain 1 96 181 - -
Bma06g01369 493 Gene3D Transferase(Phosphotransferase) domain 1 329 451 - -
Bma06g01369 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bma06g01369 493 SUPERFAMILY Protein kinase-like (PK-like) 80 460 IPR011009 -
Bma06g01369 493 ProSiteProfiles Protein kinase domain profile. 98 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01369 493 CDD STKc_phototropin_like 96 452 - -
Bma06g01369 493 Gene3D Transferase(Phosphotransferase) domain 1 182 249 - -
Bma06g01369 493 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 493 - -
Bma06g01369 493 MobiDBLite consensus disorder prediction 28 70 - -
Bma06g01369 493 MobiDBLite consensus disorder prediction 28 75 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01369 Bma-Chr6:50522493 Bma13g01124 Bma-Chr13:44342261 0 dispersed
Bma08g00829 Bma-Chr8:46131513 Bma06g01369 Bma-Chr6:50522493 8.36E-130 dispersed
Bma11g00144 Bma-Chr11:1284540 Bma06g01369 Bma-Chr6:50522493 2.03E-105 dispersed
Bma06g01369 Bma-Chr6:50522493 Bma14g00904 Bma-Chr14:10219310 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66560 PF00069 Pkinase 3.70E-37 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01369 - - rcu:8277440 902.894