Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01388 ATGAAGGCCATACCCTTATCATTTGAAGATGTTAGAGTGAAGGGGGTGTTTGATTTCACTTCTTCTTCGTCTGAATCTTTTCTGCAATTTTCTCAAGCGCCTCTGCAAAAGTGGGAGAAAACCCAGGAAGAAAGTTGCTATGTTGGTACTGAACCCACTTCTGTTCTCGACACTAAAGGAAGTCCAAGCCCTCCTACGTCCACTTCCACGCTCTCTTCTTCTTTCGGCGGCGGCGGAGGTGTCGCTTTGGCGGCGGCGGAAATCCTTGAGAACCAACCTGCTTTAGAGAAATGTGGGGTTGCAATGGAGGAATGGGAGATTAAGTTTTCTGAATCCTCCGGCCAAGAGCAGTCTATTTCTAGTTTGATTACGGGAGATATTGATGACCCATCTTTTGGATTGAACAAGTTTATTCGTAATGGGAATAATTCTCAGCAAGATTTGGAATTTCCTGCAAATTTCAGCTTTATGGATCAAGGGTTTGTTTTGGATTCAATTAATGCTGCTCCAGATCTGGTAAATGGTCGTTCTGATTTTCATTTTCATGGCCAAACTCTCATGCTCACTGAATCAACTACCAATCTTCTACCATTTTCGCTTACTTCTGGTGTATTTCAAACCCAGTCAGAGCAGCAATTTGTTGAGATTTTAGACGAAAAACCTCAAATTTCCGACACCCGGATGGCGATTAACCAAAATCAATCTCAGTTTACCCAGAATCCAGCTATGTTCATGCCTCTGCCATACTCTCAGTTACAAGAACACCATCTCTCACTCCCACAGGCGAAGAGGCTGAACTTTCAGATTCCTAAGGCTCCATTTTCAGGCTCCGACGAGGAGCTTTTTCTCCGACAACAATATCATCAGCAGGCTCAGTTACTCCCTTTCGACCTTCTAAAAAAGCCAACAATGGCGAATCAGCAGCTTCAGCAGAGTGTAATCGATCAGCTATTTAAGGTTGCAGAACTAATTGAAAATGGCGATCGGATAGTGGCAGAAGGGATATTGGCGCGGCTCAATCACCAGGTTTCTCCTATTGGTAGGCCTTTTCAAAGGGCTGCTTACTATTTCATGGAGGCCTTCAAATCTCATCTCAGTATCAACACACCTAATTCTTCAAATTTATCTCCTTCTACTCTCCTTTTCAAGATTGGAGCTTATAAATCATTTTCAGAAATCTCACCTGTTCTTCAATTTGCTAATTTCACTTCCAATCAAGTTCTCCTCGAAGCCTTGGACCGGTACGATCGAATTCATATTATCGATTTTGAAATCGGGTATGGTGGACAATGGGCTTCTTTTCTTCAAGAACTTGCTATGAGAAATGGTGGAGCTCCATATTTCAAACTCACTGCCATTGTCTTTCCCTCCCCCTCCACCATTGTCGATCTTGAGCTTAGTTTCACGAAAGAAAACTTGAAGCGGTTTGCTAGCGATTTAAACGTCTTGTTCGAACTCGAATTTGTGACTCTCGAATCGATAATCTTGGGTTCTTGGTCATTACCTTCTGGTTTGGAGAGCGAGTCGATTGCAGTGAATCTTCCGATTTCTCTTTTTTCGAATCACCCATCATCATTGCCTTCGATTCTCCGTGCAGTCAAGCAGATTTCGCCGACAATCATGGTTTCTCTCAATCGAAGTTGTGACGGAACGGACTGCTCATTCGCCCACCATATCGTAAATTCGCTCCATTACTACTCGGGCCTACTTGAATCTCTCGACTCAACCAGTGAAAACTCGGAGGCCCTGCAAAAGATAGAGAAATACTTACTTCAACCCGGGATCGAGAAACTTGTTCTAGGCCGTCTGAGTTCTCCGGAACGAACACTCCCATGGCGAAGGTTGTTTTTATCATCCGGGATTTCTCCGATAATTTGCAGTAACTTTGCAGAATCTCAGGCCGAATGTTTGGTTCACACAACTCCGGTAAGGAGCTTCCACATTGAGAAGAAACATGCTTCTCTTGTCCTTTGCTGGCAGCAGAAAGAGCTTGTCGCAGTGTCAGCTTGGAGGTGCTGA 2019 44.03 MKAIPLSFEDVRVKGVFDFTSSSSESFLQFSQAPLQKWEKTQEESCYVGTEPTSVLDTKGSPSPPTSTSTLSSSFGGGGGVALAAAEILENQPALEKCGVAMEEWEIKFSESSGQEQSISSLITGDIDDPSFGLNKFIRNGNNSQQDLEFPANFSFMDQGFVLDSINAAPDLVNGRSDFHFHGQTLMLTESTTNLLPFSLTSGVFQTQSEQQFVEILDEKPQISDTRMAINQNQSQFTQNPAMFMPLPYSQLQEHHLSLPQAKRLNFQIPKAPFSGSDEELFLRQQYHQQAQLLPFDLLKKPTMANQQLQQSVIDQLFKVAELIENGDRIVAEGILARLNHQVSPIGRPFQRAAYYFMEAFKSHLSINTPNSSNLSPSTLLFKIGAYKSFSEISPVLQFANFTSNQVLLEALDRYDRIHIIDFEIGYGGQWASFLQELAMRNGGAPYFKLTAIVFPSPSTIVDLELSFTKENLKRFASDLNVLFELEFVTLESIILGSWSLPSGLESESIAVNLPISLFSNHPSSLPSILRAVKQISPTIMVSLNRSCDGTDCSFAHHIVNSLHYYSGLLESLDSTSENSEALQKIEKYLLQPGIEKLVLGRLSSPERTLPWRRLFLSSGISPIICSNFAESQAECLVHTTPVRSFHIEKKHASLVLCWQQKELVAVSAWRC 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 50649024 50651042 + Bma024502.1 Bma06g01388 84890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01388 672 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 671 IPR005202 -
Bma06g01388 672 MobiDBLite consensus disorder prediction 43 74 - -
Bma06g01388 672 Pfam GRAS domain family 314 671 IPR005202 -
Bma06g01388 672 PANTHER SCARECROW-LIKE PROTEIN 6 32 671 - -
Bma06g01388 672 MobiDBLite consensus disorder prediction 46 74 - -
Bma06g01388 672 ProSiteProfiles GRAS family profile. 304 671 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g00970 Bma06g01388 CCT
Bma05g01129 Bma06g01388 CCT
Bma02g01017 Bma06g01388 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01017 Bma-Chr2:51424801 Bma06g01388 Bma-Chr6:50649024 0 dispersed
Bma05g01229 Bma-Chr5:51702408 Bma06g01388 Bma-Chr6:50649024 0 dispersed
Bma06g01388 Bma-Chr6:50649024 Bma14g01407 Bma-Chr14:26610798 8.81E-38 dispersed
Bma04g00970 Bma-Chr4:15418176 Bma06g01388 Bma-Chr6:50649024 1.83E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57532 PF03514 GRAS 2.50E-88 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01388 - - dzi:111304593 679.863