Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01408 ATGGCTGCGATTAGTAGAATGAAGCTCGGTTCTCAGGGCCTGGAAGTGTCCGCGCAAGGCCTCGGATGTATGGGTATGTCTGCCTTTTATGGCGGTCCTAAGCCGGATTCCGAAATGATTGCTCTAATGAACCACGCTATAGCCGCCGGCGTCACCTTCTTCGATACGTCTGATGTTTACGGTCCTCATACGAACGAAATCCTTTTGGGGAAGGCTTTCAGAGGTGGTGTGAGAGAGAAAGTTGAGTTGGCTACCAAGTTCGGTATTATTTTTTCCGATGGGAAGGGAGATGTATATGGTGATCCAGCCTATGTTAGAGCTGCTTGCGAGGCGAGCTTGAAGCGGCTTGATGTCGATTGCATCGATCTATATTATCAGCATCGCATCGACGTCAGGGTTCCGATTGAAGTCACGGTTTGTACTTTTTCTCTGCATCCGGTTTCTGTGTTTTTTTTTTTTCGTGTTGATCTGAAGATTGGGGAGATGAAGAAACTAGTTGAAGAGGGTAAGATCAAGTACATTGGTCTGTCTGAAGCCTCGGCTTCCACCATCAGAAGAGCTCATGCAGTTCATCCCATAACAGCCGTGCAGCTGGAGTGGTCCTTGTGGTCAAGGGATGCCGAGAAAGATATAATTCCTACCTGCAGGGAGCTCGGTATTGGTATCGTGGCCTATAGTCCTTTGGGGCGAGGATTCTTATCGACTGGATCCAAGTTTATCGAAGAGCTTGAAAGTGACGACTTTCGAAAGACTCTGCCGCGATTCCAACCTGAAAATCTGGAGCAGAACAAAACTATATTTGAACGAGTTAGTGAAATGGCGACTAGAAAAGGATGTACACCTGCGCAACTGGCTCTGGCCTGGGTTCACCACCAAGGAGACGATGTTTGTCCCATTCCTGGGACGACGAAGGTTGTAAATTTCAAGCAAAACATCGGGGCGTTGGCTGTAAAATTGACGGTCGAAGAAATGGCGGAGCTGGAATCCTGCGCTTCGGCAGATAATGTGAAGGGGGATCGATACGGAAGTGGATTGACGACTTGGGCCGACTCCGAGACGCCTCCGCTCTCCTCTTGGGTGGCATAG 1086 49.08 MAAISRMKLGSQGLEVSAQGLGCMGMSAFYGGPKPDSEMIALMNHAIAAGVTFFDTSDVYGPHTNEILLGKAFRGGVREKVELATKFGIIFSDGKGDVYGDPAYVRAACEASLKRLDVDCIDLYYQHRIDVRVPIEVTVCTFSLHPVSVFFFFRVDLKIGEMKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEKDIIPTCRELGIGIVAYSPLGRGFLSTGSKFIEELESDDFRKTLPRFQPENLEQNKTIFERVSEMATRKGCTPAQLALAWVHHQGDDVCPIPGTTKVVNFKQNIGALAVKLTVEEMAELESCASADNVKGDRYGSGLTTWADSETPPLSSWVA 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 50839823 50842090 - Bma024523.1 Bma06g01408 84910

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01408 361 PANTHER ALDO-KETO REDUCTASE 3-RELATED 155 359 - -
Bma06g01408 361 PANTHER ALDO-KETO REDUCTASE 3-RELATED 4 140 - -
Bma06g01408 361 CDD AKR_AKR13D1 6 327 - -
Bma06g01408 361 Gene3D - 4 357 IPR036812 -
Bma06g01408 361 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 155 359 - -
Bma06g01408 361 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 4 140 - -
Bma06g01408 361 Pfam Aldo/keto reductase family 23 330 IPR023210 -
Bma06g01408 361 SUPERFAMILY NAD(P)-linked oxidoreductase 7 329 IPR036812 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01408 - - - qsu:111998054 560.451
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01000 Bma-Chr2:50637618 Bma06g01408 Bma-Chr6:50839823 1.29E-124 dispersed
Bma06g01408 Bma-Chr6:50839823 Bma14g01257 Bma-Chr14:20624823 2.57E-93 dispersed
Bma14g00188 Bma-Chr14:2421495 Bma06g01408 Bma-Chr6:50839823 2.53E-26 transposed
Bma02g00999 Bma-Chr2:50616426 Bma06g01408 Bma-Chr6:50839823 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1080 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo02g00416 . . . . . . Bma06g01408 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002127 3 2 5 3 1 1 2 1 1 4 1 1 2 2 2 1 2 3 2 1 3 3 2 3 3 2 1 1 2 5 65