Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01410 ATGAATTTTCCGGCGAGTTTCCTCAGTGGATCGGAAACATGTCTAGCTTCGAGTACATTGATTTTTCAACAAACAGATTTTACTGGAAATCTTCCATTTTCACTGGGTGACCTCAGATTATTGAACTATTTGAGTCTATCGAGTAACAAACTGTCTGGACTTATTCCGGCGTCACTGATGAACTGCACAAACCTGTCGATAATCAAGCTTAGAGGAAACAGCTTCAATGGAAGCATACCAGAAGGATTGTTTGAATTGGGGTTAGAGGAGATGGATCTGTCAGATAATGATCTGAGCGGTTCGATCCCGTCTGGCTCGAGTAAACTTTTCGAAACTCTCCGCAAATTGGATCTTTCAATGAACAATATCAGAGGAAATTTTCCTGCAGAAATCGGACTTTACACCAATTTGAGATACTTGAATCTGTCATGGAATCATCTTCACACTAGAATTCCTCCGGAACTCGGGTTTTTTCAGAATCTAATCGTGTTAGATCTCCGAGAAAGTTTCTTGTTCGGATCGATTCCGGGCGATATTTGCGATTCTGGGAGTTTAAGGATTCTTCAACTTGATGGAAATTCTCTCACTGGATCAATCCCTGAAGAGATCCAAAACTGTTCTTCACTCTACTTGCTGAGCTTATCTCACAATAATTTTACCGGTTCGATACCAAAATCGATTTCGAAGCTGAACAAACTGAAGATATTGAAATTAGAGTTCAACGAATTCGGCGGAGAGATGCCCGGAGAGCTCGGAAAAATGGTAAGTCTTCTCGTTTTTAATGTTTCTTTCAACAGGTTGATCGGCAGGCTTCCGGTCGGAGGAATATTTCAGAGCTTGGATCAAAGTTCTCTGCAAGGGAATTTGGGTATATGTACTCCATTGTTGAAGGGACCTTGCAAGATGGACGCCGCTAAGCCGCTAGTTCTAGACCCAGATGCATATATCGATCAAACTGGCGATCAAAACCGGAGAAACGAAACTTCGAAATCGTTTATCGATTCTGGTCGACAAATGTTCTTCACTGTCTCCACCATTGTTGCAATCTGTGCAGCTGCTTTGATAGCTTGTGGAGTGATTGTTATCAGCCTGCTAAATGCATATGCTCGAGGGAGATCGCTCGAAAACGCCGTGGAAGAAAGCAAATTCTCGAGCTCTTTTCCTTCGGTGAGTTCAAACAAAGGCAAGCTCGTAATCTTCGACTCAGAGACAACTCCGGAAACGATCGGAAATATCGAATCGTTCCTCAACAAGGCCTTCAAGATCGGAGAAGGAGTGTATGAAAAAGTTTACAAGGTTCCGATAGATAATCGAGACGAAGATTTAGCCGTAAAAAAACTTGTATTATCAAGAAATAAGATCCAATATCTTGAAGATTTCGACCGAGAAATTCGAGTTCTTGAAAAGGTCAAGCACCCGAATCTCGTCGCAATCCGAGGTTATTATTGGACTCCTCAAGTGCAGCTTCTCATCACAGAATATGTTACCAATGGGAGCCTCCAAACCCAACTCCATGAACGGCCCCCTTCAACTCCGCCGCTATCATGGGCAGTCCGATTCAGAATCGTGATGGGGACGGCCAAAGGGCTGGCTCATCTCCACCATGCCAATTTCCCTGCAATCGTTCACTACAACATCAAGCCGAGTAACATCTTGATCGATGAGAATCTAAACCCCAAAATCTCAGATTACGGATTGGCAAAACTCCTCCCGGAGCTCGAAAAAGACGTACCGAATAATAGGTACGAGAGCAATTCATTGGGCTATATTGCACCGGAATTAGCATGTAAAAGCTTGAAAGTGAACATTAAATGCGATGTTTACGGATTCGGAGTTATGATTCTCGAGATTGTGACAGGAAGAAGAGCAGTCGAGTATGGAGAAGATAACATGGTATTTCTAGTTGATCATGTGAGAGTATTGCTTGAAGAGGGTGATGTTTTGGCCTGTGTTGATCCTAATTTGAGTGAATTTGAAGAGGACGATGTCGTCCCTCTTCTTAGACTGGCACTCATCTGTACTTCTCAGATCCCATCGAGCCGGCCATCAATGGAGGAGGTTCTGCAAATCCTGCAAGTCATCGCCACCCCAATTCCTCACAGAATGGGAGTCCTCTCTTAG 2121 43.47 MNFPASFLSGSETCLASSTLIFQQTDFTGNLPFSLGDLRLLNYLSLSSNKLSGLIPASLMNCTNLSIIKLRGNSFNGSIPEGLFELGLEEMDLSDNDLSGSIPSGSSKLFETLRKLDLSMNNIRGNFPAEIGLYTNLRYLNLSWNHLHTRIPPELGFFQNLIVLDLRESFLFGSIPGDICDSGSLRILQLDGNSLTGSIPEEIQNCSSLYLLSLSHNNFTGSIPKSISKLNKLKILKLEFNEFGGEMPGELGKMVSLLVFNVSFNRLIGRLPVGGIFQSLDQSSLQGNLGICTPLLKGPCKMDAAKPLVLDPDAYIDQTGDQNRRNETSKSFIDSGRQMFFTVSTIVAICAAALIACGVIVISLLNAYARGRSLENAVEESKFSSSFPSVSSNKGKLVIFDSETTPETIGNIESFLNKAFKIGEGVYEKVYKVPIDNRDEDLAVKKLVLSRNKIQYLEDFDREIRVLEKVKHPNLVAIRGYYWTPQVQLLITEYVTNGSLQTQLHERPPSTPPLSWAVRFRIVMGTAKGLAHLHHANFPAIVHYNIKPSNILIDENLNPKISDYGLAKLLPELEKDVPNNRYESNSLGYIAPELACKSLKVNIKCDVYGFGVMILEIVTGRRAVEYGEDNMVFLVDHVRVLLEEGDVLACVDPNLSEFEEDDVVPLLRLALICTSQIPSSRPSMEEVLQILQVIATPIPHRMGVLS 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 50856720 50858912 + Bma024525.1 Bma06g01410 84912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01410 706 ProSiteProfiles Protein kinase domain profile. 416 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01410 706 PANTHER BNAA09G02190D PROTEIN 20 703 - -
Bma06g01410 706 Pfam Protein kinase domain 420 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01410 706 Pfam Leucine rich repeat 184 242 IPR001611 GO:0005515
Bma06g01410 706 Gene3D Transferase(Phosphotransferase) domain 1 499 699 - -
Bma06g01410 706 Pfam Leucine Rich Repeat 136 155 IPR001611 GO:0005515
Bma06g01410 706 SUPERFAMILY L domain-like 14 285 - -
Bma06g01410 706 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 703 - -
Bma06g01410 706 Gene3D Ribonuclease Inhibitor 2 307 IPR032675 -
Bma06g01410 706 SUPERFAMILY Protein kinase-like (PK-like) 417 698 IPR011009 -
Bma06g01410 706 Gene3D Phosphorylase Kinase; domain 1 416 498 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g00995 Bma06g01410 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01410 Bma-Chr6:50856720 Bma08g01055 Bma-Chr8:49657352 4.71E-19 dispersed
Bma04g00995 Bma-Chr4:16141302 Bma06g01410 Bma-Chr6:50856720 3.76E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66561 PF00069 Pkinase 4.50E-40 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01410 - - minc:123206384 849.736