Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma06g01441 | ATGGGCAACCTACTGTTTGTGGCTTGGATATTAGCTTACTTGCAGCCTTTTGTGCTGTCTGATTTTCAAGTAGATGCACTATATGCATTGAGGACCTCACTGAATGCTACAGCAATTCAACTCATAAATTGGAACCCAAATCAAGTTGATCCATGCACTTGGCACAATGTTATTTGTACTGAAAAAAAACTTGTACTTTCTGTATCATTGTCGTCAATGGGATTTACTGGAACCTTGTCTCCAAAAGTTGGAGATCTAAAAACTCTCTCAACTCTAAATTTACAAGGAAATTACATTACTGGTGAAATACCTTACCAGCTTGGAAACCTTTCGAGTTTGACGATCTTGGCTTTGGATAACAACAGGTTAACAGGTCAAATACCATCTTCTCTTGGAAATCTTAAGAAACTTCAGTTCTTGACATTGAATCAAAATAACCTTTCTGGGACTATTCCTGAGTCACTTTCAAGTCTTCCAAGCTTGATAAATGTTTTCCTTGATTCAAATAATCTCAGTGGTGAAATCCCAGAAAAATTATTTCAAGTTTCAAAATACAATTTTTCAGGAAATAGTTTGAATTGTGGTGTAAATACCCACTCTTGTGCATCTGATGCCAACTACTCAGGTGGTTCACGCAATCCAAAACTTGGCATTATAGTTGGGATTGTTGTAGGGTTCACAATTAATCTCCTTTTGGGTGGATTTTTATTTTGTTTCTTCCGACGTAGATACCGACAAAAGCGTGAAATTTATGTCGACGTACCAGGCGAGGTTGATCGTAGACTTGCATTTGGCCAACTGAAAAGATTCTCATGGCGAGAGTTACAGTTGGCGACGGACAATTTCAGCGAGAAAAACGTGTTGGGACAAGGAGGATTTGGAAAGGTTTACAAAGGTGTGCTGGCCGATGGCACCAAAATTGCCGTGAAACGCCTCTCCAACTATGAAAGCCCTGGAGGAGATGCTTCTTTCCAACGTGAAGTTGAGATGATTAGTGTAGCTGTTCACCGGAATCTACTACGCCTCATCGGATTCTGCACCACAACTACAGAACGCCTCTTGGTATATCCCTTTATGCAAAATTTAAGTGTTGCCTACCAACTCCGAGAAATTAAACCTGGGGAGCCTGGTTTGGATTGGCCTACGAGAAAACGAGTTGCTTTAGGCACCGCTTGGGGTTTGGAGTATCTTCACGAACATTGCAATCCCAAGATTATTCATCGTGATGTTAAGGCGGCTAATGTGTTGTTGGACGATGATTTCGAAGCGGTTGTTGGAGATTTTGGTTTGGCTAAGGTGGTAGATGTTCGAAAAACGTCTGTGACCACTCAAGTACGAGGAACCATGGGTCACATAGCCCCCGAGTACTTGTCCACGGGCAAGTCGTCAGCACGGACCGATGTTTTCAGCTATGGCATCATGTTATTGGAACTTGTCACGGGCCAACGTACAATTGACTTTGCGCGTTTGGAAGAAGAAAACGATGTGTTACTCCTTGACCATGTTAAGAAGTTGGAGAGGGAGAAGAATCTAGATGATATCGTCGACAAAAACCTCGACAAAAACTACAAAATGGAAGAGGTGGAAAAGATTATTCAAGTTGCATTGTTGTGCACCCATCCGTCCCCGGAGGACAGGCCAGCCATGTCCGAGGTGGTTCGGATGCTGGAAGGAGAAGGGCTCGCAGAGAGATGGGAAGAATTGCAGCAAGTTGAAGTATCTCGTCGGGAAGAATACGAGCAGATGCAGAGGAGATTCTATTGGGGTGAAGATTCAAATTACAACCAAGATGCTATTCAAGTATCTGGAGGAAGATGA | 1818 | 42.63 | MGNLLFVAWILAYLQPFVLSDFQVDALYALRTSLNATAIQLINWNPNQVDPCTWHNVICTEKKLVLSVSLSSMGFTGTLSPKVGDLKTLSTLNLQGNYITGEIPYQLGNLSSLTILALDNNRLTGQIPSSLGNLKKLQFLTLNQNNLSGTIPESLSSLPSLINVFLDSNNLSGEIPEKLFQVSKYNFSGNSLNCGVNTHSCASDANYSGGSRNPKLGIIVGIVVGFTINLLLGGFLFCFFRRRYRQKREIYVDVPGEVDRRLAFGQLKRFSWRELQLATDNFSEKNVLGQGGFGKVYKGVLADGTKIAVKRLSNYESPGGDASFQREVEMISVAVHRNLLRLIGFCTTTTERLLVYPFMQNLSVAYQLREIKPGEPGLDWPTRKRVALGTAWGLEYLHEHCNPKIIHRDVKAANVLLDDDFEAVVGDFGLAKVVDVRKTSVTTQVRGTMGHIAPEYLSTGKSSARTDVFSYGIMLLELVTGQRTIDFARLEEENDVLLLDHVKKLEREKNLDDIVDKNLDKNYKMEEVEKIIQVALLCTHPSPEDRPAMSEVVRMLEGEGLAERWEELQQVEVSRREEYEQMQRRFYWGEDSNYNQDAIQVSGGR | 605 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 51107230 | 51112802 | - | Bma024556.1 | Bma06g01441 | 84943 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma06g01441 | 605 | CDD | TM_EGFR-like | 212 | 249 | - | - | |
Bma06g01441 | 605 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 405 | 417 | IPR008271 | GO:0004672|GO:0006468 | |
Bma06g01441 | 605 | Pfam | Protein kinase domain | 283 | 554 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g01441 | 605 | SUPERFAMILY | Protein kinase-like (PK-like) | 262 | 557 | IPR011009 | - | |
Bma06g01441 | 605 | PANTHER | LRR RECEPTOR KINASE SERK2 | 5 | 605 | - | - | |
Bma06g01441 | 605 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 5 | 605 | - | - | |
Bma06g01441 | 605 | Gene3D | Ribonuclease Inhibitor | 21 | 202 | IPR032675 | - | |
Bma06g01441 | 605 | ProSitePatterns | Protein kinases ATP-binding region signature. | 288 | 310 | IPR017441 | GO:0005524 | |
Bma06g01441 | 605 | SMART | serkin_6 | 282 | 556 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g01441 | 605 | Gene3D | Phosphorylase Kinase; domain 1 | 251 | 358 | - | - | |
Bma06g01441 | 605 | SUPERFAMILY | L domain-like | 23 | 194 | - | - | |
Bma06g01441 | 605 | ProSiteProfiles | Protein kinase domain profile. | 282 | 561 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma06g01441 | 605 | Gene3D | Transferase(Phosphotransferase) domain 1 | 359 | 576 | - | - | |
Bma06g01441 | 605 | Pfam | Leucine rich repeat N-terminal domain | 23 | 59 | IPR013210 | - | |
Bma06g01441 | 605 | Pfam | Leucine rich repeat | 112 | 171 | IPR001611 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g01074 | Bma-Chr3:13121150 | Bma06g01441 | Bma-Chr6:51107230 | 0 | dispersed | |
Bma05g00895 | Bma-Chr5:46755243 | Bma06g01441 | Bma-Chr6:51107230 | 3.95E-104 | dispersed | |
Bma06g01441 | Bma-Chr6:51107230 | Bma07g00724 | Bma-Chr7:18574395 | 1.24E-174 | dispersed | |
Bma12g00624 | Bma-Chr12:27486608 | Bma06g01441 | Bma-Chr6:51107230 | 3.54E-101 | dispersed | |
Bma01g00140 | Bma-Chr1:1343567 | Bma06g01441 | Bma-Chr6:51107230 | 0 | transposed | |
Bma02g00968 | Bma-Chr2:49871952 | Bma06g01441 | Bma-Chr6:51107230 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66563 | PF00069 | Pkinase | 1.30E-42 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma06g01441 | - | - | csv:116403405 | 902.123 |