Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01441 ATGGGCAACCTACTGTTTGTGGCTTGGATATTAGCTTACTTGCAGCCTTTTGTGCTGTCTGATTTTCAAGTAGATGCACTATATGCATTGAGGACCTCACTGAATGCTACAGCAATTCAACTCATAAATTGGAACCCAAATCAAGTTGATCCATGCACTTGGCACAATGTTATTTGTACTGAAAAAAAACTTGTACTTTCTGTATCATTGTCGTCAATGGGATTTACTGGAACCTTGTCTCCAAAAGTTGGAGATCTAAAAACTCTCTCAACTCTAAATTTACAAGGAAATTACATTACTGGTGAAATACCTTACCAGCTTGGAAACCTTTCGAGTTTGACGATCTTGGCTTTGGATAACAACAGGTTAACAGGTCAAATACCATCTTCTCTTGGAAATCTTAAGAAACTTCAGTTCTTGACATTGAATCAAAATAACCTTTCTGGGACTATTCCTGAGTCACTTTCAAGTCTTCCAAGCTTGATAAATGTTTTCCTTGATTCAAATAATCTCAGTGGTGAAATCCCAGAAAAATTATTTCAAGTTTCAAAATACAATTTTTCAGGAAATAGTTTGAATTGTGGTGTAAATACCCACTCTTGTGCATCTGATGCCAACTACTCAGGTGGTTCACGCAATCCAAAACTTGGCATTATAGTTGGGATTGTTGTAGGGTTCACAATTAATCTCCTTTTGGGTGGATTTTTATTTTGTTTCTTCCGACGTAGATACCGACAAAAGCGTGAAATTTATGTCGACGTACCAGGCGAGGTTGATCGTAGACTTGCATTTGGCCAACTGAAAAGATTCTCATGGCGAGAGTTACAGTTGGCGACGGACAATTTCAGCGAGAAAAACGTGTTGGGACAAGGAGGATTTGGAAAGGTTTACAAAGGTGTGCTGGCCGATGGCACCAAAATTGCCGTGAAACGCCTCTCCAACTATGAAAGCCCTGGAGGAGATGCTTCTTTCCAACGTGAAGTTGAGATGATTAGTGTAGCTGTTCACCGGAATCTACTACGCCTCATCGGATTCTGCACCACAACTACAGAACGCCTCTTGGTATATCCCTTTATGCAAAATTTAAGTGTTGCCTACCAACTCCGAGAAATTAAACCTGGGGAGCCTGGTTTGGATTGGCCTACGAGAAAACGAGTTGCTTTAGGCACCGCTTGGGGTTTGGAGTATCTTCACGAACATTGCAATCCCAAGATTATTCATCGTGATGTTAAGGCGGCTAATGTGTTGTTGGACGATGATTTCGAAGCGGTTGTTGGAGATTTTGGTTTGGCTAAGGTGGTAGATGTTCGAAAAACGTCTGTGACCACTCAAGTACGAGGAACCATGGGTCACATAGCCCCCGAGTACTTGTCCACGGGCAAGTCGTCAGCACGGACCGATGTTTTCAGCTATGGCATCATGTTATTGGAACTTGTCACGGGCCAACGTACAATTGACTTTGCGCGTTTGGAAGAAGAAAACGATGTGTTACTCCTTGACCATGTTAAGAAGTTGGAGAGGGAGAAGAATCTAGATGATATCGTCGACAAAAACCTCGACAAAAACTACAAAATGGAAGAGGTGGAAAAGATTATTCAAGTTGCATTGTTGTGCACCCATCCGTCCCCGGAGGACAGGCCAGCCATGTCCGAGGTGGTTCGGATGCTGGAAGGAGAAGGGCTCGCAGAGAGATGGGAAGAATTGCAGCAAGTTGAAGTATCTCGTCGGGAAGAATACGAGCAGATGCAGAGGAGATTCTATTGGGGTGAAGATTCAAATTACAACCAAGATGCTATTCAAGTATCTGGAGGAAGATGA 1818 42.63 MGNLLFVAWILAYLQPFVLSDFQVDALYALRTSLNATAIQLINWNPNQVDPCTWHNVICTEKKLVLSVSLSSMGFTGTLSPKVGDLKTLSTLNLQGNYITGEIPYQLGNLSSLTILALDNNRLTGQIPSSLGNLKKLQFLTLNQNNLSGTIPESLSSLPSLINVFLDSNNLSGEIPEKLFQVSKYNFSGNSLNCGVNTHSCASDANYSGGSRNPKLGIIVGIVVGFTINLLLGGFLFCFFRRRYRQKREIYVDVPGEVDRRLAFGQLKRFSWRELQLATDNFSEKNVLGQGGFGKVYKGVLADGTKIAVKRLSNYESPGGDASFQREVEMISVAVHRNLLRLIGFCTTTTERLLVYPFMQNLSVAYQLREIKPGEPGLDWPTRKRVALGTAWGLEYLHEHCNPKIIHRDVKAANVLLDDDFEAVVGDFGLAKVVDVRKTSVTTQVRGTMGHIAPEYLSTGKSSARTDVFSYGIMLLELVTGQRTIDFARLEEENDVLLLDHVKKLEREKNLDDIVDKNLDKNYKMEEVEKIIQVALLCTHPSPEDRPAMSEVVRMLEGEGLAERWEELQQVEVSRREEYEQMQRRFYWGEDSNYNQDAIQVSGGR 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 51107230 51112802 - Bma024556.1 Bma06g01441 84943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01441 605 CDD TM_EGFR-like 212 249 - -
Bma06g01441 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Bma06g01441 605 Pfam Protein kinase domain 283 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01441 605 SUPERFAMILY Protein kinase-like (PK-like) 262 557 IPR011009 -
Bma06g01441 605 PANTHER LRR RECEPTOR KINASE SERK2 5 605 - -
Bma06g01441 605 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 605 - -
Bma06g01441 605 Gene3D Ribonuclease Inhibitor 21 202 IPR032675 -
Bma06g01441 605 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Bma06g01441 605 SMART serkin_6 282 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01441 605 Gene3D Phosphorylase Kinase; domain 1 251 358 - -
Bma06g01441 605 SUPERFAMILY L domain-like 23 194 - -
Bma06g01441 605 ProSiteProfiles Protein kinase domain profile. 282 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01441 605 Gene3D Transferase(Phosphotransferase) domain 1 359 576 - -
Bma06g01441 605 Pfam Leucine rich repeat N-terminal domain 23 59 IPR013210 -
Bma06g01441 605 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01074 Bma-Chr3:13121150 Bma06g01441 Bma-Chr6:51107230 0 dispersed
Bma05g00895 Bma-Chr5:46755243 Bma06g01441 Bma-Chr6:51107230 3.95E-104 dispersed
Bma06g01441 Bma-Chr6:51107230 Bma07g00724 Bma-Chr7:18574395 1.24E-174 dispersed
Bma12g00624 Bma-Chr12:27486608 Bma06g01441 Bma-Chr6:51107230 3.54E-101 dispersed
Bma01g00140 Bma-Chr1:1343567 Bma06g01441 Bma-Chr6:51107230 0 transposed
Bma02g00968 Bma-Chr2:49871952 Bma06g01441 Bma-Chr6:51107230 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66563 PF00069 Pkinase 1.30E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01441 - - csv:116403405 902.123