Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01463 ATGAACAAAGCAGACAACGCTTGGCAACTCACGGCAGCAACGCTTGTCGGGCTACAGAGCGTTCCGGGGCTGATAATTCTGTACGGTGCGGCGGTGAAGAAGAAATGGGCTATAAACTCGGCGTTCATGGCGCTCTACGCCTTTGCCTGCGTTCTTATCTGTTGGGTTTTATGGGGTTATAGATTGTCGTTCGGAGATAAACTTATTCCTTTTTGGGGAAAAGTTAATTTCGCTGTAGACCAGAAGTTCTTGCTTAATCAAACATTTTCTGGGTTGTTCCCGAACTCTACAATGGTGTATTTCCAGTTCGTCTTTGCAGCGATTACTCTGATTCTGATCGCTGGTGCAGTTTTGGGTCGGATGAATTTTTTTGCTTGGATGCTGTTTGTGCCTTTATGGCTTACTTTTTCCTACACCGTCGGAGCATTTTCCATTTGGAGTCCAAACGGATTCCTCTTCAAACTCGGACTCATCGATTATTCCGGCGGTTATGTCATTCATCTGTCGTCCGGAGTGGCTGGTTTCACCGCAGCATATTGGGTGGGTCCTCGCATGTCGACTGACCGGGAAAACTTTCCGCCGAACAACGTCCTTCTCATGCTCGCCGGAGCAGGTTTGCTCTGGATGGGTTGGACGGGGTTCAACGGCGGAGACCCTTATGTCGTCAGTGTTGATGCTTCGTTGGCTGTTTTGAACACTCATGTCTGCACTGCAGCGAGTCTCCTCACTTGGCTTGCTCTTGATGTCGTCTTCTTTAGAAAACCTTCCATTATCGGCGCCGTTCAAGGCATGATCACTGGTTTGGTCTGCATTACTCCCGCTGCTGGTGTGGTACAAGGATGGGCAGCAGTACTCATGGGAATATTATCAGGCTCAATTCCATGGTTTACAATGATGGTTGTCCACAAGAAATCTAAGCTCCTCCAAAAGGTGGACGACACAATGGCCGTCTTCCACACCCACGCGGTGGCCGGAAGCCTCGGCGGAATCCTTTCCGGCCTCTTTGCCCATCCAAGACTATGCTACTTGTTTTATGGCAGTTACGGCAACTATGTCGGGCTATTTTACGGCTTCCAAATGGGAATTTTCCATACGGGGTTTCGGCAAATCGGAATTCAGCTTCTCGGGATCTTATTTATCGTCACTCTCAATGTTCTGACTACAAGTTTGATCTGTTGGTTGGTGCGATTGATTGTTCCGCTGAGGATGTCTGAAGCAGACATGATGGTCGGAGATGAAGCAGCTCACGGGGAAGAAGCTTATGCCATATGGGGAGATGGAGAAAAGCTCAAAAAATTTAAGCACGGTGGAACGAGTTACAGTGATGTTGAGATGGGTAAGGCTTGA 1347 48.48 MNKADNAWQLTAATLVGLQSVPGLIILYGAAVKKKWAINSAFMALYAFACVLICWVLWGYRLSFGDKLIPFWGKVNFAVDQKFLLNQTFSGLFPNSTMVYFQFVFAAITLILIAGAVLGRMNFFAWMLFVPLWLTFSYTVGAFSIWSPNGFLFKLGLIDYSGGYVIHLSSGVAGFTAAYWVGPRMSTDRENFPPNNVLLMLAGAGLLWMGWTGFNGGDPYVVSVDASLAVLNTHVCTAASLLTWLALDVVFFRKPSIIGAVQGMITGLVCITPAAGVVQGWAAVLMGILSGSIPWFTMMVVHKKSKLLQKVDDTMAVFHTHAVAGSLGGILSGLFAHPRLCYLFYGSYGNYVGLFYGFQMGIFHTGFRQIGIQLLGILFIVTLNVLTTSLICWLVRLIVPLRMSEADMMVGDEAAHGEEAYAIWGDGEKLKKFKHGGTSYSDVEMGKA 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 51298585 51300156 - Bma024577.1 Bma06g01463 84965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01463 448 SUPERFAMILY Ammonium transporter 2 403 - -
Bma06g01463 448 PANTHER AMMONIUM TRANSPORTER 1 445 - -
Bma06g01463 448 TIGRFAM amt: ammonium transporter 5 421 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bma06g01463 448 Pfam Ammonium Transporter Family 7 421 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bma06g01463 448 ProSitePatterns Ammonium transporters signature. 159 184 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bma06g01463 448 PANTHER AMMONIUM TRANSPORTER MEP2 1 445 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bma06g01463 448 Gene3D Ammonium transporter AmtB like domains 1 424 IPR029020 -
Bma06g01463 448 PRINTS Rhesus blood group protein signature 102 118 IPR002229 GO:0005887
Bma06g01463 448 PRINTS Rhesus blood group protein signature 229 251 IPR002229 GO:0005887
Bma06g01463 448 PRINTS Rhesus blood group protein signature 198 216 IPR002229 GO:0005887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01463 Bma-Chr6:51298585 Bma15g00616 Bma-Chr15:7829645 0 dispersed
Bma02g00930 Bma-Chr2:49092498 Bma06g01463 Bma-Chr6:51298585 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01463 K03320 - fve:101303013 738.413