Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01483 ATGAATCTGACACACGGTAAAGGGTGGATGTCAACGGCGGCTTTTAGCGCTGATTGGAGGTCCGGCGACGTTGTCTCCGACGAGTTCCCGGTCGGTCTGCGAGTTCTGGTTGTGGACGATGATCCTACATGCCTAATGATCTTGGAGAGAATGCTCCGTGCTTGCCTCTACGAAGTTACAAAATGCCAGAGAGCAGAAGAAGCACTGTCTCTACTTCGAGGGATCAAAAATAGGTTTGATATTGTTCTAAGCGACGTTCACATGCCTGACATGGACGGATTCAAACTCCTAGAACACATTGGTCTGGAAATGGACTTGCCTGTTATAATGATGTCTGTGGATGATGGAAAACATGTTGTGATGAAGGGATTCGTTTCGCAGAAATATCGATTGTACCTCAGAAGGCTGAGTGGAGTATCACAGCATCAGAGTAACTCTTTCATCAGTCCACAAGAAGCAACCTTTGCTCCGATTTCGTCGATCAATGGCCTTGATCTTCAGGCTTTTGCTGTAACTGGTCAACTCCCGCAGAACATCGTCACCTTCCAAGTGCCGGGTATTAGTCGATCCGCCATAAAATCCGAGACTTCTATGCCTCTTGTCGACCAGAGAAATGTCTTCAGTTTTGAAAATCCAAATCCAAAACTAAGGTTTATTGAGGGGCAACATCAAAATCTGAGTAGTAACAAGCCAGTCACTTTAATACACGGCCTTCCAGCTCATAATTTGCACAATACTGTCCAATCTAGTGCAATCCTTAGCTGCAATATCATGACTCGGCCTCCACCATCGGCAGAAGAGCCTTTGATTGCAAATGGAGGAGGCAATGTTTTGGGAAGAAACAGGTCAGCCAATAATGGTAGAGGCACAGAAAATAATCTTCCACCGGATTCTATAATCATAAATTTTCCAATGAACCGACCAGCCGATGGTTTGTCACTTCAAAGGGCTACCAGAGTTTCCGATCTCCGGTCGACTGGGAAGGAATTCGAGCCGAGTTTTGATATTTTCAATGACCTCCACGGTTTCAGCTTAAACTTCAATGCTTCACAACATGTTAACTCACTACAAGACTGTCTTGAAGATTCACCCTCAGTTTTGGTTCATCAAGAGATTCCTACTGTTCAGAAGAACTCCAGTTCATTTTCTGCTATGAAGGCTCCGTTTTCGCCAGAAGAAGGAACCAAACAAAGGGTTTCAAATAATTCTGGTGAGCTCGGCTCGATTCTCGTGGGAAATTCAACAAGAGTCGGTGATGCAACTTGTAGAACTGGCCTCATTTCCAATCATTTCGGCCAGGAAGATCTTATGACTGCAATTCTCAAGCAGGTTGGCTCCCAACCTCTTCATGTAAGCATTATGCTTCAGAAGAAAGGTATATTTGCTCACGAAATGCTCTTGATTTTTTGTTTTTCAGCAACAAGACATTGGAACAGGCGAAGACGAGTCGGATTTCGACGGATATTTCTATTTATAACTCCGAAATTTCTGAGCTTCTGA 1500 44.27 MNLTHGKGWMSTAAFSADWRSGDVVSDEFPVGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEEALSLLRGIKNRFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSVDDGKHVVMKGFVSQKYRLYLRRLSGVSQHQSNSFISPQEATFAPISSINGLDLQAFAVTGQLPQNIVTFQVPGISRSAIKSETSMPLVDQRNVFSFENPNPKLRFIEGQHQNLSSNKPVTLIHGLPAHNLHNTVQSSAILSCNIMTRPPPSAEEPLIANGGGNVLGRNRSANNGRGTENNLPPDSIIINFPMNRPADGLSLQRATRVSDLRSTGKEFEPSFDIFNDLHGFSLNFNASQHVNSLQDCLEDSPSVLVHQEIPTVQKNSSSFSAMKAPFSPEEGTKQRVSNNSGELGSILVGNSTRVGDATCRTGLISNHFGQEDLMTAILKQVGSQPLHVSIMLQKKGIFAHEMLLIFCFSATRHWNRRRRVGFRRIFLFITPKFLSF 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 51407722 51410161 - Bma024595.1 Bma06g01483 84985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01483 499 SUPERFAMILY CheY-like 32 124 IPR011006 -
Bma06g01483 499 ProSiteProfiles Response regulatory domain profile. 34 142 IPR001789 GO:0000160
Bma06g01483 499 SMART REC_2 33 136 IPR001789 GO:0000160
Bma06g01483 499 Pfam Response regulator receiver domain 35 122 IPR001789 GO:0000160
Bma06g01483 499 Gene3D - 33 126 - -
Bma06g01483 499 PANTHER TWO-COMPONENT RESPONSE REGULATOR 127 240 IPR045279 GO:0009736
Bma06g01483 499 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 124 IPR045279 GO:0009736
Bma06g01483 499 PANTHER TWO-COMPONENT RESPONSE REGULATOR 127 240 - -
Bma06g01483 499 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 124 - -
Bma06g01483 499 CDD REC_typeB_ARR-like 35 123 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma04g01144 Bma06g01483 CCT
Bma05g01022 Bma06g01483 CCT
Bma04g01144 Bma06g01483 ECH
Bma05g01022 Bma06g01483 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00994 Bma-Chr6:46458801 Bma06g01483 Bma-Chr6:51407722 4.96E-32 dispersed
Bma06g01483 Bma-Chr6:51407722 Bma07g00742 Bma-Chr7:20021750 3.32E-35 dispersed
Bma01g00489 Bma-Chr1:4010229 Bma06g01483 Bma-Chr6:51407722 3.43E-06 transposed
Bma05g01022 Bma-Chr5:48731842 Bma06g01483 Bma-Chr6:51407722 2.73E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57544 PF00072 Response_reg 5.90E-16 CL0304 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01483 - K14491 gmx:100814930 248.054