Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01503 ATGCAAGGAGAAACTCTTATCAACTCCAAAGGAGAACTTACAGTAAGCTTCGGTTATCAATGCAACAGCACCGGAGGCAGCAATTACGAAGCTCTTAACGGATACAAGATTCAGCCTCAGATCCAAAAAACGAGCAGTTTCTCTTGCTTGTCCGGAGCTGCTTTAAGCGCAAATGCTACTCTAGCAAATACAAATATATGCAATGGCCTGATAGGGGCAGAAATACTTCCTAGTTTGGACTCTCCCAATTCATTTCGACGAATTCCCTCTTCTCCGAACATTTCAAGACTCGATATTTTGTCGTCTTCTCTACAAAGCAGCTTCTCTTACTTGAGTTGCAGTCCGCCCTCTCCGCATGATCATGATTTGTACTCTTTGAAATCCATGAGTGCTCCTTCGAAAAATGAAGGTTTTCTGAATGCAACTGAAGTACAAGTGGCCGGAGGAGCTGCCGGAGAAGATAGAGTCCAAGCTGTTTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCGATTTATGACGGATTCAACGGTCGAGATGCAGCTGATTTTCTGGCTGGTACATTGTATGAAACCATTACATATTATTTTAACCTCATGGAAATTGATGGGTCACTTCAATATGCTCTTGATGATGGCAATAGAGAATCGGATACAGATGTTAATAACATATTTCGGAGTAGTTCGTTTCGTAAAAACGACACGGCTAAAGATTCATTCAGGCTTGCAGTTCTCAATTGTCTCCAACGGGCTCTCAGCCAGGCCGAGAATGATTTTCTGTACATGGTCGAACAAGAAATGGAGGATCGTCCAGATTTGGTTTCGATTGGTTCCTGTGTTTTAATAGTGCTTCTTCATGGAAAAGATTTGTACTCGTTGAATTTAGGCGATAGTCGAGTAGTCTTAGCTACGATTGGCGAATGCACTGATGTGCATGAAAATGAGAAGCTCATAGCAGTTCCGCTTACTGAAAGTCACACAGTCGACAACGAAGCTGAACGAACTCGACTACAACGCGACCATCCAGACGATCCTACTGTCTTCGTTGGCGGAAAAGTTAAAGGAAAACTGAAGGTCACTCGAGCATTTGGAGTCGGGTATTTGAAGAAGAAAAAGCTGAATGATGCACTTATGGGTATCTTAAAAGTTCGCAATCTTACAAGTCCTCCCTACATATCTACCCAGCCAGTGATGAGCGTGCATAGAATTTCAAATTCCGATCGCTTTGTCATCATAGCAAGCGACGGGTTGTTCGATTTTTTCACAAATGAAGAAGCAGTAGAGCTGGTACATTCCTATATCGCGATCAATCCTTCTGGCGATCCTGCAAAATTTCTACTCGAGCAGCTAATACTGAGAGCTGCCGATTGCGCAGGATTTACAATGGAAGAGTTGATGAATATTCCGGCTGGTAGACGGAGGAAGTACCACGACGATGTAACTGTCATGGTTATCATCCTCGGAACGAACCAGCGGACGACCAAGGCGTCGACTTTTATGTAA 1500 43.47 MQGETLINSKGELTVSFGYQCNSTGGSNYEALNGYKIQPQIQKTSSFSCLSGAALSANATLANTNICNGLIGAEILPSLDSPNSFRRIPSSPNISRLDILSSSLQSSFSYLSCSPPSPHDHDLYSLKSMSAPSKNEGFLNATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETITYYFNLMEIDGSLQYALDDGNRESDTDVNNIFRSSSFRKNDTAKDSFRLAVLNCLQRALSQAENDFLYMVEQEMEDRPDLVSIGSCVLIVLLHGKDLYSLNLGDSRVVLATIGECTDVHENEKLIAVPLTESHTVDNEAERTRLQRDHPDDPTVFVGGKVKGKLKVTRAFGVGYLKKKKLNDALMGILKVRNLTSPPYISTQPVMSVHRISNSDRFVIIASDGLFDFFTNEEAVELVHSYIAINPSGDPAKFLLEQLILRAADCAGFTMEELMNIPAGRRRKYHDDVTVMVIILGTNQRTTKASTFM 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 51508273 51510026 + Bma024616.1 Bma06g01503 85005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01503 499 ProSiteProfiles PPM-type phosphatase domain profile. 138 486 IPR001932 -
Bma06g01503 499 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 498 - -
Bma06g01503 499 Pfam Protein phosphatase 2C 241 436 IPR001932 -
Bma06g01503 499 PANTHER PROTEIN PHOSPHATASE 2C 2 498 IPR015655 GO:0004722|GO:0006470
Bma06g01503 499 Gene3D - 121 495 IPR036457 -
Bma06g01503 499 SMART PP2C_4 129 484 IPR001932 -
Bma06g01503 499 CDD PP2Cc 151 486 IPR001932 -
Bma06g01503 499 SUPERFAMILY PP2C-like 151 487 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01503 Bma-Chr6:51508273 Bma11g00119 Bma-Chr11:1139330 3.62E-12 dispersed
Bma02g01213 Bma-Chr2:54178395 Bma06g01503 Bma-Chr6:51508273 0 transposed
Bma02g00896 Bma-Chr2:47752102 Bma06g01503 Bma-Chr6:51508273 1.77E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01503 - - qsu:111988460 702.59