Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01565 ATGGATCGCAAAACAAGTGAAGAAAACATGAATTCAATGGAGAAGGGTCCGAGAAGCGTTAGCTGCAAAGATATGATTTTCAGAGCAGATAAAATTGACCTGAAAAACTTAGATATGCAGCTGGAGAAGCATTTGAACCGAGTTTGGACGAAAGGGGTAGAGAAGAATAAGCAAAAGGAGGAATGGGAGATTGATTTGTCTAAACTCGATATCCGATATGTTGTTGCTCATGGAACTTATGGGACAGTTTACAGGGGTACATACGATAGTCAAGATGTTGCTGTGAAATTGCTCGACTGGGGGGAGGACGGGGTTGCTACAGCTGCCGAAACGGCTGCTCTACGATCATCGTTTCAGCAAGAGGTTGCTGTTTGGCACAAGCTTGATCATCCGAATGTTACAAAATTTGTCGGAGCTTCGTTGGGAACATCTAATCTAAAGGTTCCTTCGAATAACACTTCAACCGATGGCCAAAGTTCGTTTCCTTCTCGAGCATGTTGTGTTGTCGTTGAGTATCTTCTGGGTGGAACCTTGAAGCAATTCTTGATAAGAAATAGACGGAAGAAGCTCGCCTTTAAGGTCGTGATTCAACTTGCATTGGATCTCTCTCGAGGTCTTAGCTATCTGCATTCGAAGAAGATTGTTCATCGCGATGTCAAAACTGAAAACATGTTGCTAGACGGCCAAAGGAACTTAAAAATCGCTGATTTTGGCGTTGCTCGTGTGGAAGCTCAAAATCCGAGTGACATGACTGGTGAAACGGGTACCCTTGGATACATGGCTCCTGAGGTACTCGACGGAAAGCCGTACAATCGGAGGTGTGATGTCTATAGCTTTGGCATCTGTTTATGGGAAATTTACTGCTGTGACATGCCCTATCCCAATCTTAGCTTCACCGACGTGTCATCTGCAGTTGTTCGACAGAATTTACGACCGGAGATACCCAGATGTTGTCCGAGTGCTTTAGCGAATGTCATGAGAAAATGCTGGGACGCAAATGCAGATAAGCGTCCGGAAATGGGTGATGTGGTGAGAATGCTGGAAGCAATCGATACGAGTAGAGGAGGAGGAATGATCCCTGAAGGTCAATCGTCCGGCTGTTTCTGCTTCGGCCCGGCACGGGGGCCCTAG 1131 45.98 MDRKTSEENMNSMEKGPRSVSCKDMIFRADKIDLKNLDMQLEKHLNRVWTKGVEKNKQKEEWEIDLSKLDIRYVVAHGTYGTVYRGTYDSQDVAVKLLDWGEDGVATAAETAALRSSFQQEVAVWHKLDHPNVTKFVGASLGTSNLKVPSNNTSTDGQSSFPSRACCVVVEYLLGGTLKQFLIRNRRKKLAFKVVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDGQRNLKIADFGVARVEAQNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPNLSFTDVSSAVVRQNLRPEIPRCCPSALANVMRKCWDANADKRPEMGDVVRMLEAIDTSRGGGMIPEGQSSGCFCFGPARGP 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 51936843 51939039 - Bma024683.1 Bma06g01565 85067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01565 376 SMART serkin_6 69 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01565 376 PIRSF ILK 29 154 - -
Bma06g01565 376 PIRSF ILK 159 356 - -
Bma06g01565 376 Gene3D Phosphorylase Kinase; domain 1 57 149 - -
Bma06g01565 376 Pfam Protein tyrosine and serine/threonine kinase 73 347 IPR001245 GO:0004672|GO:0006468
Bma06g01565 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 7 370 - -
Bma06g01565 376 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 7 370 - -
Bma06g01565 376 SUPERFAMILY Protein kinase-like (PK-like) 53 347 IPR011009 -
Bma06g01565 376 CDD STKc_MAP3K-like 75 347 - -
Bma06g01565 376 PRINTS Tyrosine kinase catalytic domain signature 208 226 IPR001245 GO:0004672|GO:0006468
Bma06g01565 376 PRINTS Tyrosine kinase catalytic domain signature 274 296 IPR001245 GO:0004672|GO:0006468
Bma06g01565 376 PRINTS Tyrosine kinase catalytic domain signature 318 340 IPR001245 GO:0004672|GO:0006468
Bma06g01565 376 PRINTS Tyrosine kinase catalytic domain signature 170 183 IPR001245 GO:0004672|GO:0006468
Bma06g01565 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Bma06g01565 376 ProSiteProfiles Protein kinase domain profile. 69 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma06g01565 376 Gene3D Transferase(Phosphotransferase) domain 1 175 356 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00830 Bma06g01565 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00983 Bma-Chr1:9679366 Bma06g01565 Bma-Chr6:51936843 0 dispersed
Bma04g00070 Bma-Chr4:616589 Bma06g01565 Bma-Chr6:51936843 1.85E-19 dispersed
Bma06g01565 Bma-Chr6:51936843 Bma09g00626 Bma-Chr9:43610895 1.16E-163 dispersed
Bma12g01032 Bma-Chr12:42403872 Bma06g01565 Bma-Chr6:51936843 5.15E-56 dispersed
Bma02g00830 Bma-Chr2:45203595 Bma06g01565 Bma-Chr6:51936843 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66566 PF07714 PK_Tyr_Ser-Thr 1.90E-57 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01565 - - jre:108989477 661.759