Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01570 ATGAGGGCCGGAGCGGCGACGTTCCGGTCTATACTGGACAAACCCCTCAACCAGCTAACCGAGGATGACATTTCCCAGCTCACCCGGGAAGACTGCCGCAAATATCTCAAAGAAAAAGGAATGCGTAGGCCTTCCTGGAACAAATCGCAAGCCATCCAGCAGGTCATATGTCTGAAAGCCTTGCTCGAACCCGGGGACGATTCAGGCTCCACTGCTCTCAGGAAGGTCGGCGTCTCCCCGCGCGTTACTTTAGATCAAGGCGATGATGACCAAATACCATTGTCAGCTGCAGAATTAAATCCACAAAGTAGATTGGAGCCTCCAATGTATTCTTTTGAGGATGCAACAGCTGACCCAGAAAACAAAACTGGCAGTCCGAGACTTCAATGCGTAAAAAAGAAGTTGGTTGAGCAAATGTCGATTTTTTATGGGGGGAAGGTAAATGTGTACGACGGAGTGCCACCGGAGAAGGCTCATACAATAATTAATATTGCAGCCAGTCCAATCCATTTACCCCAAGACGATCGGATTGATCGAACGACAATAGTTTGGCCTTTTCCATGCCTTTTTCCAAGTACTTACGAAAGGGATTCCTCTTTTTCTCCTTGCGACTCTATTAGCGAGACCATCCAAACGGTAGAGAGTCAGGTAAACCGAAAAGTTTCGCTCCAAAGATATCTAGAAAAGCGAAAAGACAGAGAAAGATTGAAGATCAAGAAAAACGTGGGTTTGACTTCCAGCCTCAAGGTTTATTTTAACAATCATGCCAGAGTTCACATGTCAGATGGAAACTCAAACCGGACTAATTCAAGCTTCCCCTCTCAATCTGGGTTACCACAACGAGCTTTCGATAGGACTGTCAGGTCAAACATCGGCTGTCTTCCAATTGACCTCAACATCAAAGATCTCCAAGAGTTCTGA 921 46.25 MRAGAATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPGDDSGSTALRKVGVSPRVTLDQGDDDQIPLSAAELNPQSRLEPPMYSFEDATADPENKTGSPRLQCVKKKLVEQMSIFYGGKVNVYDGVPPEKAHTIINIAASPIHLPQDDRIDRTTIVWPFPCLFPSTYERDSSFSPCDSISETIQTVESQVNRKVSLQRYLEKRKDRERLKIKKNVGLTSSLKVYFNNHARVHMSDGNSNRTNSSFPSQSGLPQRAFDRTVRSNIGCLPIDLNIKDLQEF 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 51983574 51985935 + Bma024688.2 Bma06g01570 85072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01570 306 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 5 281 - -
Bma06g01570 306 SMART tify_2 132 167 IPR010399 -
Bma06g01570 306 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 5 281 IPR040390 -
Bma06g01570 306 Pfam tify domain 138 166 IPR010399 -
Bma06g01570 306 MobiDBLite consensus disorder prediction 259 279 - -
Bma06g01570 306 Pfam Jas motif 216 233 IPR018467 -
Bma06g01570 306 ProSiteProfiles Tify domain profile. 132 167 IPR010399 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g01092 Bma06g01570 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01092 Bma-Chr5:49647358 Bma06g01570 Bma-Chr6:51983574 1.28E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57554 PF06200 tify 2.80E-13 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01570 - - csv:101204377 298.516