Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma06g01610 ATGAGAACTAAGAATCGAACTATAGACCGGATTTTGATGTTTAGAAGTAAGGTTGGGAAGATGATGAAGTGCATCTGTCCCGGAAATCAATTAAAAGTCGATGAAATTGATCATTCATCCGAGTCTCTGGCAACTAGAGACTACTCTGCTAGTGGTTTTTCGTCTCGAACTGCAGAGGTGGAAACGAAGGTGGAGACTAGCAACATCGAAGAAGCCGAGTCGTCTCTTCGCCAAAGTGGTTTTCTCAACTACGAGGAAGCAAGAGCATTACTCGGAAGGCTGGAGTATCAGAAAGGAAACGTAGAAGCAGCTCTCCATGTGTTTGAAGGAATCGATATCACTGCAGTGGCTCCTCGGATGACAATTTCGATTTCAAGAAGATGCGGACAAATTAATCGTCCGCATTCGCAAGGCGACAGCGCCCCGCTTATGTCCTTGCATGCCGTTAGTTTACTTCTCGAAGCCGTTTATCTCAAAGCAAAATCTTTGCAAAGTCTAGGTAGATTCGCAGAGGCAGCAAAATCTTGCATAGTTGTTTTAGATACTGTTCAGTCTGCACTTCCAGAGGGCTTGCCGGAAAACTTTGCTATAGATTGTAAATTACAAGAAATTTCGACAAAATCTGTCGAGTTGCTCCCTGAGTTATGGAAATTAGCGGGTAGTCTTCAAGAATGTATCTTGTCGTACAGGCGGGCTCTCCTGTACCGATGGAATCTCGACATGAAAACGAGTTCGAAGATGGAAAAGGAATTTGCAGTTTTTCTTCTCTACAGCGGTTGTGAAGCCAATGCTCCGAATCTTGGGTCGCAGATGGAAGGCTCTTTCGTAGCGAAGAACAACTTGGAAGAAGCAGTTCTTTTGTTATTGATTCTGATGAGAAAATATTTGCTTGGAAGAATTGGATGGGACCCCTCCATTGTTGAACATCTTACCTTTGCTCTCACCATTTCGGGTGACTTCCGATCATTAGCGCATCAAGTCCAACAGTTGCTTCCTGGAATTATATCGAGGAGAGAAAAATATTGCACTCTAGCCCTCTGTTTCTATGCCGAAGGTGAATATATTGTTGCTTTGAATCTTTTGAGAAATTTTCTGAACAACAGAGAAAATTCAAACTGCATTCTGGAACTACTGTTGACTTCAAAACTTTGTGCCGAAAACTTGGTTTGTCTCGACCAAGGGATCAGTTTTGTCCAAAAAGCAATTTCGATGATGCACGGAAAATGCTCTCAAATGCTTTGCGTCGCCAATTGCTTATTTGGAGTCTTGTTATCAGCTGAATCAAGATCAGTTGTCTCTCATACTGAGAGGATTTTGAAGCAGGCAGAAGCATTGAAGGCCTTAGAAACCGCAGAAAAGGCCACGACAGAAAAAGACCCATACATTGTGTTTCATCTTTGTCTCGAACTTGCGGAGCAGCGGAAATTGGATTTGGCGCTATATTTTGCCAAGCAATTGCTTAGACTCGTCGCCGGCTCGAGTGCAAAAGGGTATCTACTTTTAGCCCGGATATTGTCAGCTCAGAAACGATTTTCAGACGCTGAGACTGTAATAAATGTCGCTCTTGAGCAGACTGGAAAGTGGGATCAAGGGGAGTTGTTAAGAACTAAAGCTAAACTGCAGACTGCGCAGGGGCAGGTGAAGAAGTCGATAGAGTCGTATACTCGTCTTTTGGCCGTTCTTCAAGTTCAGACTAGAAGTGTTGATTTTGTGAAGAAGCTCACCCAGAAGAAGAGCAGCCATGATAGAAGGCTTGAAATGGAAGCATGGCATGATTTGGCCAACATTTACACAGGATTGTCTCAGTGGCGGGATGCGGAGGTCTGTCTTTCAAAGTCTGAAGCCATCAACCCTTATTCTGCTGCAAGATGGCACTCCACTGGTTTGTTGTACGAGGCTAAAGGGCTTGATCGAGAGGCTCTGAAAGCATACAAAAAGGCATTGGATGTGGAAGCCGGCCATGTCCCGAGCTTGATCTCTGCAGCCTGTGTACTAAGAAGGCTTGGAGGTCCATGTTTGGGTGTTGTGAGAAGCTTGCTAGGTGATGCCCTGCGGCTCGACCGGATGAACTCGTCGGCCTGGTATTATTTGGGGATGCTGTACAAGTCTGACGAGAGAGCTTCAGCCATGGAGATTGCTGAATGCTTTGAAGCTTCGGCTCTCCTCGAAGAATCTGCACCAGTTGAACCCTTCAGATAG 2199 44.97 MRTKNRTIDRILMFRSKVGKMMKCICPGNQLKVDEIDHSSESLATRDYSASGFSSRTAEVETKVETSNIEEAESSLRQSGFLNYEEARALLGRLEYQKGNVEAALHVFEGIDITAVAPRMTISISRRCGQINRPHSQGDSAPLMSLHAVSLLLEAVYLKAKSLQSLGRFAEAAKSCIVVLDTVQSALPEGLPENFAIDCKLQEISTKSVELLPELWKLAGSLQECILSYRRALLYRWNLDMKTSSKMEKEFAVFLLYSGCEANAPNLGSQMEGSFVAKNNLEEAVLLLLILMRKYLLGRIGWDPSIVEHLTFALTISGDFRSLAHQVQQLLPGIISRREKYCTLALCFYAEGEYIVALNLLRNFLNNRENSNCILELLLTSKLCAENLVCLDQGISFVQKAISMMHGKCSQMLCVANCLFGVLLSAESRSVVSHTERILKQAEALKALETAEKATTEKDPYIVFHLCLELAEQRKLDLALYFAKQLLRLVAGSSAKGYLLLARILSAQKRFSDAETVINVALEQTGKWDQGELLRTKAKLQTAQGQVKKSIESYTRLLAVLQVQTRSVDFVKKLTQKKSSHDRRLEMEAWHDLANIYTGLSQWRDAEVCLSKSEAINPYSAARWHSTGLLYEAKGLDREALKAYKKALDVEAGHVPSLISAACVLRRLGGPCLGVVRSLLGDALRLDRMNSSAWYYLGMLYKSDERASAMEIAECFEASALLEESAPVEPFR 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 52269087 52271597 + Bma024725.1 Bma06g01610 85112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma06g01610 732 SUPERFAMILY TPR-like 442 560 IPR011990 GO:0005515
Bma06g01610 732 SMART tpr_5 531 564 IPR019734 GO:0005515
Bma06g01610 732 SMART tpr_5 495 528 IPR019734 GO:0005515
Bma06g01610 732 SMART tpr_5 621 654 IPR019734 GO:0005515
Bma06g01610 732 SMART tpr_5 153 186 IPR019734 GO:0005515
Bma06g01610 732 SMART tpr_5 587 620 IPR019734 GO:0005515
Bma06g01610 732 SUPERFAMILY TPR-like 532 703 IPR011990 GO:0005515
Bma06g01610 732 ProSiteProfiles TPR repeat profile. 621 654 IPR019734 GO:0005515
Bma06g01610 732 Gene3D Tetratricopeptide repeat domain 564 727 IPR011990 GO:0005515
Bma06g01610 732 Gene3D Tetratricopeptide repeat domain 335 561 IPR011990 GO:0005515
Bma06g01610 732 PANTHER PROTEIN NPG1 14 732 IPR043376 -
Bma06g01610 732 PANTHER OS10G0471400 PROTEIN 14 732 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00760 Bma06g01610 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02245 Bma-Chr1:79593859 Bma06g01610 Bma-Chr6:52269087 0 dispersed
Bma06g01610 Bma-Chr6:52269087 Bma07g01074 Bma-Chr7:43211408 0 dispersed
Bma02g00760 Bma-Chr2:39226439 Bma06g01610 Bma-Chr6:52269087 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma06g01610 K21843 - qsu:112015183 1023.85