Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00028 ATGAAAACATCTCAGAAGCACCCAAATGCAGCCAGCATCAAAGGATTGTACCATCAGCCTATGCAAGACATAGAGTCCTATTATTTGTCTCATTTCCAAGTGTTAGGAAACACTCCCTGTTCTAATCTTGGCAGCCGAGGGATGACAGTATCCTTTGACCCTTGCAAGGAACGGTTTTTTACTCTCGAATCATCCGCAGCCACCAATGACGTTGGTCCTTGTGATTCCTCCAGTGTCTTTTCAAGCAAAAGCACCTTTTCCCCACAAGTTTCTCATTCAAGTTCCTCGGATCCACATCATTCCCATGATAACTTGTCCGGATCACCAGCTAGTGGGTGCTCAGTAAGCACAGATGACGATAAGTTAAAGCACAATCTGAGGGAACTGGAGATTTCATTGTTGGGACCAGAATCAGATATTGGCGACAGCTGCTATTGCTCTTTCAACGGTGGGACAAATCGAGCCACCTCCATGGCTACTTGGAAGAATCAAATGGTAGACGAAATTCCCAGATTGAACCTGAAAGAATTACTCATCGGCTGTGCACAATCCATACATGAGGCTGATTTATCGACAGCTATGCACTTTATGGAGGCGTTAGAGCAGACGGTGTCAGTATCTGGGGAGCCATTGCAGAGATTGGGTGCTTATTTGTTGGAGGGGTTGAGAGCAAGGCTGGAAAGATCAGGAAGTTCAATCTACAAGGCTCTCAAGTGTGAGGAGCCGACAAGCTCGGAGTTAATGTCATATATGTCTATCATCTATGAAATCTGTCCCTACTGGAAGTTTGGTTACTCATCTGCAAATGTTTTCATTCAAGAAGCCATGGAAAATGAACCCAAAATCCACATAATAGATTTCCAAATTGCACAGGGCAGTCAGTGGATACCACTTATCCAGGATCTTGCAAAACGAGACGGAAATTGTGGGCCGCCACTTATCCGTATAACTGGTGTAGACGATTCTCAATCGGCCCATGCTCGGGGAGGGGGACTTCACATCGTAGGGCAGAGGTTGTCACAAGTTGCACAATCGTGTGGAGTAAGATTCGAGTTCCATGCTGCGGCCATGTCCGGAAGTGAGGTAGAATTGTGTAATCTTGGGGTACAACCTGGGGAGGCGATTGCTGTTAACTTTCCTTACGTTTTACATCACATTCCCGATGAGAGTGTGAGCACTCAGAATCACAGAGACCGTCTGTTGAGGTTAGTGAAGAGTTTATCGCCAAAAGTCGTCACCATTATCGAGCAGGAATCGAACACGAACACTTCCCCGTTCCTTTCGAGATTCGTCGAGACTTTAGATTATTACACAGCCATGTTCGAATCGATAGACGCAGCTCTGCCAAGAGATGACAAGCAGAGGATCAGGGCGGAGCAGCACTGCGTGGCGAGAGACATAGTGAACATGATAGCGTGCGAGGGGGAAGAACGGGAAGAACGGCATGAGCTTCTCGGGAAATGGAGGTTGAGATTGACGATGGGTGGGTTCACACCTTATCCATTGAGTCCGGGGGTGGGAGATGCGGTGAGAAAATTGTTGAAAGAGTACAGTCAGAATTACAGAGTGGAGGAGAGTAATGAAGCTCTGTATTTGAGGTGGATGAAGAGAGCTATGGTAACTTCCTCTGCGTGGAGGTAG 1641 46.92 MKTSQKHPNAASIKGLYHQPMQDIESYYLSHFQVLGNTPCSNLGSRGMTVSFDPCKERFFTLESSAATNDVGPCDSSSVFSSKSTFSPQVSHSSSSDPHHSHDNLSGSPASGCSVSTDDDKLKHNLRELEISLLGPESDIGDSCYCSFNGGTNRATSMATWKNQMVDEIPRLNLKELLIGCAQSIHEADLSTAMHFMEALEQTVSVSGEPLQRLGAYLLEGLRARLERSGSSIYKALKCEEPTSSELMSYMSIIYEICPYWKFGYSSANVFIQEAMENEPKIHIIDFQIAQGSQWIPLIQDLAKRDGNCGPPLIRITGVDDSQSAHARGGGLHIVGQRLSQVAQSCGVRFEFHAAAMSGSEVELCNLGVQPGEAIAVNFPYVLHHIPDESVSTQNHRDRLLRLVKSLSPKVVTIIEQESNTNTSPFLSRFVETLDYYTAMFESIDAALPRDDKQRIRAEQHCVARDIVNMIACEGEEREERHELLGKWRLRLTMGGFTPYPLSPGVGDAVRKLLKEYSQNYRVEESNEALYLRWMKRAMVTSSAWR 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1238169 1239809 - Bma024793.1 Bma07g00028 85165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00028 546 Pfam GRAS domain family 174 546 IPR005202 -
Bma07g00028 546 ProSiteProfiles GRAS family profile. 165 546 IPR005202 -
Bma07g00028 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 545 IPR005202 -
Bma07g00028 546 MobiDBLite consensus disorder prediction 87 115 - -
Bma07g00028 546 MobiDBLite consensus disorder prediction 87 117 - -
Bma07g00028 546 PANTHER SCARECROW-LIKE PROTEIN 13 18 545 IPR030005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00028 Bma-Chr7:1238169 Bma13g01108 Bma-Chr13:44033288 0 dispersed
Bma11g00034 Bma-Chr11:534874 Bma07g00028 Bma-Chr7:1238169 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57560 PF03514 GRAS 1.30E-125 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00028 - - mcha:111005597 756.518