Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00041 ATGGTCGCGGAGGCCGCGGAGACGGCGACCAAGTTTCAAAGCCCGGACTTTCGGCCAGTCCCTTCCCCTCCTGATTTCCATCCCGATGTTACGGTTTCGACCCACGATGGTATCCACTTCTGGGAATTCATGATTGCTGGTTCAATCGCTGGATCGGTCGAGCACATGGCTATGTTTCCCGTCGACACGGTCAAGACTCATATGCAAGCTCTTAGGTCATGTCCAATGAAATCGGTCGGTGTGCGACAAGCCCTCCAGTCAATTTTAAAATCCGAGGGATCAGCTGGGCTCTATCGCGGGATCGGGGCAATGGCTCTCGGCGCTGGACCAGCCCACGCAGTGTATTTTTCAGTATACGAATTTTGTAAGAAATTCTTCTCGGAAGGAAACGCCAATAATTCAGCTGCCCATGCTCTTTCCGGCGTGTTTGCTACGGTTGCTAGCGATGCAGTCTTTACGCCGATGGACATGGTGAAGCAGAGATTGCAGTTGGGAAGTAGTCCCCACAATGGAGTTTGGGATTGTGTGAAGAGGGTTCTTAGGGAAGAAGGCTTTCGAGCATTTTATGCCTCCTACAAGACGACTGTCTTGATGAACGCCCCTTACACTGCTGTACATTTCACAACATACGAGGCTGCAAAGCGGGCTTTGATGGAAATTTCGCCGGACAGTGTTAGTGATGAGCGGTGGGTCGTTCATGCCACTGCCGGAGCTGCAGCTGGCGCCTCAGCCGCTGTTGTCACAACGCCACTTGATGTTGTTAAAACTCAACTACAGTGTCAGGGTGTGTGTGGATGCGATAGATACAAAAATGGATCGATGAGGGATGTCATCAGGAGTATAGTTAGCAAGGATGGAACAAGAGGGCTTATGAGGGGATGGATTCCTAGGATGCTTTTCCATGCTCCTGCAGCAGCTATATGCTGGTCTACCTATGAAGCCTCCAAATCATTCTTCCGACAACTCAACCACAATTGA 978 50.72 MVAEAAETATKFQSPDFRPVPSPPDFHPDVTVSTHDGIHFWEFMIAGSIAGSVEHMAMFPVDTVKTHMQALRSCPMKSVGVRQALQSILKSEGSAGLYRGIGAMALGAGPAHAVYFSVYEFCKKFFSEGNANNSAAHALSGVFATVASDAVFTPMDMVKQRLQLGSSPHNGVWDCVKRVLREEGFRAFYASYKTTVLMNAPYTAVHFTTYEAAKRALMEISPDSVSDERWVVHATAGAAAGASAAVVTTPLDVVKTQLQCQGVCGCDRYKNGSMRDVIRSIVSKDGTRGLMRGWIPRMLFHAPAAAICWSTYEASKSFFRQLNHN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1332196 1333682 + Bma024807.1 Bma07g00041 85178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00041 325 Gene3D Mitochondrial carrier domain 168 325 IPR023395 -
Bma07g00041 325 Pfam Mitochondrial carrier protein 38 128 IPR018108 -
Bma07g00041 325 Pfam Mitochondrial carrier protein 228 320 IPR018108 -
Bma07g00041 325 Pfam Mitochondrial carrier protein 134 219 IPR018108 -
Bma07g00041 325 SUPERFAMILY Mitochondrial carrier 37 313 IPR023395 -
Bma07g00041 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Bma07g00041 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Bma07g00041 325 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Bma07g00041 325 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Bma07g00041 325 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Bma07g00041 325 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Bma07g00041 325 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Bma07g00041 325 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Bma07g00041 325 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 5 324 - -
Bma07g00041 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Bma07g00041 325 MobiDBLite consensus disorder prediction 1 28 - -
Bma07g00041 325 Gene3D Mitochondrial carrier domain 22 167 IPR023395 -
Bma07g00041 325 PANTHER MITOFERRIN-1-RELATED 5 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00541 Bma-Chr5:29357414 Bma07g00041 Bma-Chr7:1332196 8.35E-06 dispersed
Bma07g00041 Bma-Chr7:1332196 Bma14g01043 Bma-Chr14:12450563 1.12E-163 dispersed
Bma08g00712 Bma-Chr8:42913636 Bma07g00041 Bma-Chr7:1332196 1.87E-06 dispersed
Bma14g01725 Bma-Chr14:36649018 Bma07g00041 Bma-Chr7:1332196 6.02E-24 dispersed
Bma15g00327 Bma-Chr15:3196727 Bma07g00041 Bma-Chr7:1332196 1.74E-17 dispersed
Bma07g00041 Bma-Chr7:1332196 Bma07g01583 Bma-Chr7:51132075 6.20E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00041 K15113 - csv:101215924 546.584