Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00043 ATGAATTTCATCGAAATTGGAACAAAAATTGCCGATTTCGCATCGACAAAGATGGTTTATCCTCAAAACGACGGTGGAATTCAATCGAACTACAGCGACCACCACCACCAACAGGGTCAGACGATGAGCAGGAGATCGGACGATGGCTACAACTGGAGAAAATACGGCCAAAAACAGGTCAAAGGAAGCGAAAATCCAAGAAGCTATTACAAGTGCACGTTCCCCAGTTGCCCCACCAAGAAGAAGGTCGAAAGGTCCTTAGACGGCCAAATTACTGAGATTGTCTACAAGGGTAGCCATAACCATCCAAAACCTCAGTCGACGAGAAGATCTTCATCGTCGTCTTTACCTGCTCCTCAGACCATTCAAGCTTCTAATCCTGTTTCTGAACAATCATATGCCCCTCACGGAAATGGACAAACAGACTCCGGGGCCACACCTGAGAATTCCTCCATAACAATGGGGGACGATGATTTTGAGCAGAGCTCCCACAGCAGTAAACGGGGTGCAGATGACTTTGATGAAGACGAAACAGCTACGAAAAGATGGAAAATGGAGGGTGACAGCGAAGGAATGTCAGCAGCCGGAAGTAGAACAGTGAGAGAGCCTAGAGTCGTAGTTCAAACCACGAGTGACATAGATATTTTAGACGATGGATACAGGTGGAGGAAATATGGGCAGAAAGTGGTGAAGGGAAACCCAAATCCAAGGAGCTACTACAAGTGCACAAGCCAAGGCTGTCCTGTAAGAAAGCACGTAGAGAGAGCCTCCCACGATTTGAGAGCAGTCATTACAACCTACGAGGGGAAACACAGCCACGATGTTCCAGCCGCACGAGGGAGTGGCTCAGCTGCTGTGATTAAGCCTTCCACTCTTAGCCACGCTCCAAGGCTTCAGAGCTCTCAAGGCCAACGACCCTTCGGCCTAGAAATCGCGAGGAACCCCCCGAGTTTTACATTCAGCGACTACGGAATGAATCAGCCACAGTTTAACGAGAATATGTTCTTGAGAACTAAGGAGGAGTTAAAGGATGATGCTTTCTTCGAATCATTGCTACGTTGA 1062 47.93 MNFIEIGTKIADFASTKMVYPQNDGGIQSNYSDHHHQQGQTMSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSSSSLPAPQTIQASNPVSEQSYAPHGNGQTDSGATPENSSITMGDDDFEQSSHSSKRGADDFDEDETATKRWKMEGDSEGMSAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSQGCPVRKHVERASHDLRAVITTYEGKHSHDVPAARGSGSAAVIKPSTLSHAPRLQSSQGQRPFGLEIARNPPSFTFSDYGMNQPQFNENMFLRTKEELKDDAFFESLLR 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1350892 1352151 - Bma024809.1 Bma07g00043 85180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00043 353 MobiDBLite consensus disorder prediction 160 188 - -
Bma07g00043 353 SUPERFAMILY WRKY DNA-binding domain 208 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 Gene3D WRKY domain 31 106 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 29 294 - -
Bma07g00043 353 Gene3D WRKY domain 203 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 29 294 IPR044810 GO:0003700
Bma07g00043 353 Pfam WRKY DNA -binding domain 47 103 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 Pfam WRKY DNA -binding domain 217 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 MobiDBLite consensus disorder prediction 95 200 - -
Bma07g00043 353 ProSiteProfiles WRKY domain profile. 211 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 SUPERFAMILY WRKY DNA-binding domain 45 105 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 ProSiteProfiles WRKY domain profile. 47 105 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 MobiDBLite consensus disorder prediction 25 51 - -
Bma07g00043 353 SMART WRKY_cls 46 104 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 SMART WRKY_cls 216 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma07g00043 353 MobiDBLite consensus disorder prediction 101 159 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00043 Bma11g00064 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00043 Bma-Chr7:1350892 Bma11g00064 Bma-Chr11:758234 2.02E-138 dispersed
Bma07g00043 Bma-Chr7:1350892 Bma10g00588 Bma-Chr10:7220605 2.15E-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57562 PF03106 WRKY 3.60E-25 CL0274 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00043 K13424 - jre:108996946 478.789