Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00049 ATGCTGTTGAATTCTGCCACAGTAGGGGGGTTTATCATCAGGGATATTAAACCGGAGAACATATTGCTCGATGAGAATGAGAATCTTAAGATTTCTGATTTTGGTTTAAGTGCCCTTGCTGAATCCAAGCGTCAAGATGGACTACTCCATACTACTTGTGGCACTCCGGCTTATGTCGCCCCTGAAGTGATTAATAGGAAAGGCTATGATGGTGCAAAAGCTGATATCTGGTCTTGTGGGGTTGTTTTGTTTGTCATTTTGGCAGGGTATCTTCCTTTCCACGATGCAAATTTAATGGCTATGTATAGGAAGATTGAAAAAGCAGATTATAAATGCCCAAATTGGTTTCCACCTGAGGTTCGGAGGATGCTTTGCCGGATTTTGGATCCAAATCCCCATACCAGGATGTCCATTGCTAAGATAAAGGAAAACTCTTGGTTCAAAAGAGTATTGACCTCCAAACGATCCAAAACTCAGACAGATAGCAAGAATGTGTGTCCCCCTGATACTGTTGTTTCGGGGTCATGCGAGACTAGTTTGGCTGCAGAGGGAGAGCTCAAAGAACTTAAACCAGCCAACTTGAATGCTTTCGATATAATCGCACTTTCAGATGGATTTGATCTGACTGGATTGTTTGAAGACAAATCCCAGAAGATGGAAGCAAGGTTTACTTCTAGACAACCTGCAAATGTCATTATTTCTAAGCTGGAAGAAATCGCCAAGCTTTTACAACTGAGGGTGCAGAAGAAGGAAGCTGGTCTGGTAAAATTCGAAGCACAAAAAGAAGGTAGAAGGGGGTTTTGTCCATCGACGCAGAGATCTTTGAAGTTACTCCATCATTTTACATGGTCGATGTAA 858 42.19 MLLNSATVGGFIIRDIKPENILLDENENLKISDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVILAGYLPFHDANLMAMYRKIEKADYKCPNWFPPEVRRMLCRILDPNPHTRMSIAKIKENSWFKRVLTSKRSKTQTDSKNVCPPDTVVSGSCETSLAAEGELKELKPANLNAFDIIALSDGFDLTGLFEDKSQKMEARFTSRQPANVIISKLEEIAKLLQLRVQKKEAGLVKFEAQKEGRRGFCPSTQRSLKLLHHFTWSM 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1389845 1390702 + Bma024815.1 Bma07g00049 85186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00049 285 Pfam NAF domain 191 249 IPR004041 GO:0007165
Bma07g00049 285 PANTHER - 13 267 - -
Bma07g00049 285 SMART serkin_6 2 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00049 285 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00049 285 Gene3D Transferase(Phosphotransferase) domain 1 3 195 - -
Bma07g00049 285 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 13 267 - -
Bma07g00049 285 SUPERFAMILY Protein kinase-like (PK-like) 10 163 IPR011009 -
Bma07g00049 285 Gene3D Kinase associated domain 1, KA1 196 268 - -
Bma07g00049 285 ProSiteProfiles NAF domain profile. 189 213 IPR018451 GO:0007165
Bma07g00049 285 CDD CIPK_C 195 266 - -
Bma07g00049 285 Pfam Protein kinase domain 10 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00049 Bma-Chr7:1389845 Bma07g00833 Bma-Chr7:27670098 3.56E-102 dispersed
Bma07g00049 Bma-Chr7:1389845 Bma01g01718 Bma-Chr1:53850625 1.86E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66570 PF00069 Pkinase 2.20E-35 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00049 - K07198 cpap:110823886 380.178