Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00086 ATGGCGGATGCCTGTTGCGGTGTTTTGACTGAGGGGGACGTGTCCTCTCGTGAGGCGAGGCGGAGGAGGATGGAGCTTAGAAAGTTTAAGTTTGGTGCTGATATGACTCCGTTGGACGCCGAGAGCGAGAAAAAGCGTCAGAAGCTCGAGGTTTGTTCCCGATCGGTTTCTAGGGACTGTGAGCGGCCGGCGGAGATCTGTGTTTCCGATGATGGAAAATGTGACGAGGTGTTGGATAATGGAAGAACTGAGAATAAGGAGATCTTATGTTCGAGAGAGCCGTTGGTCGTTGAAGTTCCGATGAAGTGTCAGTCTGCCCCAGTACTTATGAGGCCAAAAGTTTCCGATGACTTCCCAAAGTTTGGGACGGCTTTGGTGTGCGGAAGGCGGAGAGACATGGAGGACGCTGTCTCTATTCATCCTTGTTTTTTCCGACGAGATTTCGAAACGACATCTTCTTTGTTTCACTATTTCGGTGTGTACGACGGCCATGGCTGCTCTCATGTTTCTACCAGGTGTCAAGAACGACTGCATGTGTTGGTGAAAGAAGAGCTTGACAAAACGGAGCCGCCGGCGATTGAGTGGGAAGAGTTCATGGAAAGAAGTTTCAGGAAAATGGACGAGGAGGTAGTGGCGTTAAACGTTAGCGGTGTAGCTTCGAAGTGCAGGTGCGAACTACAGTCACCGGAGTGCGACGCTGTCGGATCTACAGCTGTTGTTTCAGTTCTTACATCGGACAAGATAATCATCGCGAACTGCGGCGACTCAAGAGCTGTGCTTTGTCGTAACGGACATGCCATACCTCTTTCTTCCGATCACAAGCCGGATCGTCCAGACGAGCTGAGTCGGATCTGCGCCGCCGGTGGACGAGTAATCTATTGGGACGGCCCAAGAGTTCTTGGAGTTCTAGCCATGTCCAGGGCTATAGGTGATAACTACCTCAAGCCATATGTAAGCTGCGAGCCAGAGGTGACATCGACTGATCGAACGGCAGAAGACGAATGTCTTATACTGGCCAGCGATGGGCTGTGGGACGTGGTGTCGAACGAGACGGCATGTGGGGTAGCGCTCATGTGCCTGCGAGGGAAACCAAAGGGTGCGTTCAGGAGGAGAGAGAGAAAAGACGGTGGGGGAGAGGTGTCGGACGAGGCATGTACGGAGGCGTCCATGTTGCTCACGAAGCTGGCTTTGGCCAGGCATAGTTCTGACAATGTGAGCGTGGTGGTCATCGATCTGAGGAAGGACGCGTGGCCTTGTAATTATTAA 1266 52.37 MADACCGVLTEGDVSSREARRRRMELRKFKFGADMTPLDAESEKKRQKLEVCSRSVSRDCERPAEICVSDDGKCDEVLDNGRTENKEILCSREPLVVEVPMKCQSAPVLMRPKVSDDFPKFGTALVCGRRRDMEDAVSIHPCFFRRDFETTSSLFHYFGVYDGHGCSHVSTRCQERLHVLVKEELDKTEPPAIEWEEFMERSFRKMDEEVVALNVSGVASKCRCELQSPECDAVGSTAVVSVLTSDKIIIANCGDSRAVLCRNGHAIPLSSDHKPDRPDELSRICAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTSTDRTAEDECLILASDGLWDVVSNETACGVALMCLRGKPKGAFRRRERKDGGGEVSDEACTEASMLLTKLALARHSSDNVSVVVIDLRKDAWPCNY 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1652327 1654397 - Bma024852.1 Bma07g00086 85223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00086 421 PANTHER PROTEIN PHOSPHATASE 2C 37 65 415 - -
Bma07g00086 421 Pfam Protein phosphatase 2C 127 404 IPR001932 -
Bma07g00086 421 SUPERFAMILY PP2C-like 119 413 IPR036457 -
Bma07g00086 421 PANTHER ALPHABET, ISOFORM E-RELATED 65 415 - -
Bma07g00086 421 CDD PP2Cc 120 412 IPR001932 -
Bma07g00086 421 ProSiteProfiles PPM-type phosphatase domain profile. 120 412 IPR001932 -
Bma07g00086 421 SMART PP2C_4 108 410 IPR001932 -
Bma07g00086 421 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Bma07g00086 421 Gene3D - 111 416 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00086 Bma14g00520 CCT
Bma07g00086 Bma14g00520 ECH
Bma07g00086 Bma11g00104 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00086 Bma-Chr7:1652327 Bma10g01171 Bma-Chr10:41120187 1.26E-82 dispersed
Bma11g00104 Bma-Chr11:1042831 Bma07g00086 Bma-Chr7:1652327 0 wgd
Bma14g00520 Bma-Chr14:5779888 Bma07g00086 Bma-Chr7:1652327 5.97E-144 wgd
Bma03g00142 Bma-Chr3:1069355 Bma07g00086 Bma-Chr7:1652327 7.29E-143 wgd
Bma07g00086 Bma-Chr7:1652327 Bma07g01553 Bma-Chr7:51002858 1.84E-06 wgd
Bma07g00086 Bma-Chr7:1652327 Bma08g01106 Bma-Chr8:50040361 1.91E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00086 K14497 - jre:108998487 506.523