Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g00086 | ATGGCGGATGCCTGTTGCGGTGTTTTGACTGAGGGGGACGTGTCCTCTCGTGAGGCGAGGCGGAGGAGGATGGAGCTTAGAAAGTTTAAGTTTGGTGCTGATATGACTCCGTTGGACGCCGAGAGCGAGAAAAAGCGTCAGAAGCTCGAGGTTTGTTCCCGATCGGTTTCTAGGGACTGTGAGCGGCCGGCGGAGATCTGTGTTTCCGATGATGGAAAATGTGACGAGGTGTTGGATAATGGAAGAACTGAGAATAAGGAGATCTTATGTTCGAGAGAGCCGTTGGTCGTTGAAGTTCCGATGAAGTGTCAGTCTGCCCCAGTACTTATGAGGCCAAAAGTTTCCGATGACTTCCCAAAGTTTGGGACGGCTTTGGTGTGCGGAAGGCGGAGAGACATGGAGGACGCTGTCTCTATTCATCCTTGTTTTTTCCGACGAGATTTCGAAACGACATCTTCTTTGTTTCACTATTTCGGTGTGTACGACGGCCATGGCTGCTCTCATGTTTCTACCAGGTGTCAAGAACGACTGCATGTGTTGGTGAAAGAAGAGCTTGACAAAACGGAGCCGCCGGCGATTGAGTGGGAAGAGTTCATGGAAAGAAGTTTCAGGAAAATGGACGAGGAGGTAGTGGCGTTAAACGTTAGCGGTGTAGCTTCGAAGTGCAGGTGCGAACTACAGTCACCGGAGTGCGACGCTGTCGGATCTACAGCTGTTGTTTCAGTTCTTACATCGGACAAGATAATCATCGCGAACTGCGGCGACTCAAGAGCTGTGCTTTGTCGTAACGGACATGCCATACCTCTTTCTTCCGATCACAAGCCGGATCGTCCAGACGAGCTGAGTCGGATCTGCGCCGCCGGTGGACGAGTAATCTATTGGGACGGCCCAAGAGTTCTTGGAGTTCTAGCCATGTCCAGGGCTATAGGTGATAACTACCTCAAGCCATATGTAAGCTGCGAGCCAGAGGTGACATCGACTGATCGAACGGCAGAAGACGAATGTCTTATACTGGCCAGCGATGGGCTGTGGGACGTGGTGTCGAACGAGACGGCATGTGGGGTAGCGCTCATGTGCCTGCGAGGGAAACCAAAGGGTGCGTTCAGGAGGAGAGAGAGAAAAGACGGTGGGGGAGAGGTGTCGGACGAGGCATGTACGGAGGCGTCCATGTTGCTCACGAAGCTGGCTTTGGCCAGGCATAGTTCTGACAATGTGAGCGTGGTGGTCATCGATCTGAGGAAGGACGCGTGGCCTTGTAATTATTAA | 1266 | 52.37 | MADACCGVLTEGDVSSREARRRRMELRKFKFGADMTPLDAESEKKRQKLEVCSRSVSRDCERPAEICVSDDGKCDEVLDNGRTENKEILCSREPLVVEVPMKCQSAPVLMRPKVSDDFPKFGTALVCGRRRDMEDAVSIHPCFFRRDFETTSSLFHYFGVYDGHGCSHVSTRCQERLHVLVKEELDKTEPPAIEWEEFMERSFRKMDEEVVALNVSGVASKCRCELQSPECDAVGSTAVVSVLTSDKIIIANCGDSRAVLCRNGHAIPLSSDHKPDRPDELSRICAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSCEPEVTSTDRTAEDECLILASDGLWDVVSNETACGVALMCLRGKPKGAFRRRERKDGGGEVSDEACTEASMLLTKLALARHSSDNVSVVVIDLRKDAWPCNY | 421 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1652327 | 1654397 | - | Bma024852.1 | Bma07g00086 | 85223 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g00086 | 421 | PANTHER | PROTEIN PHOSPHATASE 2C 37 | 65 | 415 | - | - | |
Bma07g00086 | 421 | Pfam | Protein phosphatase 2C | 127 | 404 | IPR001932 | - | |
Bma07g00086 | 421 | SUPERFAMILY | PP2C-like | 119 | 413 | IPR036457 | - | |
Bma07g00086 | 421 | PANTHER | ALPHABET, ISOFORM E-RELATED | 65 | 415 | - | - | |
Bma07g00086 | 421 | CDD | PP2Cc | 120 | 412 | IPR001932 | - | |
Bma07g00086 | 421 | ProSiteProfiles | PPM-type phosphatase domain profile. | 120 | 412 | IPR001932 | - | |
Bma07g00086 | 421 | SMART | PP2C_4 | 108 | 410 | IPR001932 | - | |
Bma07g00086 | 421 | ProSitePatterns | PPM-type phosphatase domain signature. | 157 | 165 | IPR000222 | GO:0043169 | |
Bma07g00086 | 421 | Gene3D | - | 111 | 416 | IPR036457 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00086 | Bma14g00520 | CCT | |
Bma07g00086 | Bma14g00520 | ECH | |
Bma07g00086 | Bma11g00104 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00086 | Bma-Chr7:1652327 | Bma10g01171 | Bma-Chr10:41120187 | 1.26E-82 | dispersed | |
Bma11g00104 | Bma-Chr11:1042831 | Bma07g00086 | Bma-Chr7:1652327 | 0 | wgd | |
Bma14g00520 | Bma-Chr14:5779888 | Bma07g00086 | Bma-Chr7:1652327 | 5.97E-144 | wgd | |
Bma03g00142 | Bma-Chr3:1069355 | Bma07g00086 | Bma-Chr7:1652327 | 7.29E-143 | wgd | |
Bma07g00086 | Bma-Chr7:1652327 | Bma07g01553 | Bma-Chr7:51002858 | 1.84E-06 | wgd | |
Bma07g00086 | Bma-Chr7:1652327 | Bma08g01106 | Bma-Chr8:50040361 | 1.91E-116 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g00086 | K14497 | - | jre:108998487 | 506.523 |