Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00096 ATGGATCCACAAATTCCTTCGTTCTCAGATTCGGGTAATGGGTTTGAAATTAATTACGATAATCTCGTATCTTATTTCCCAAATTTAGCGAATGATTTCAAATTCGAAGTTCCATCCCCCGATCTAAACTTCATGGAAAATGCCCTTTTTCTTCACGAGCTGGATCAAGGTGAGTTAGCTCCGGCCGTGAGTGCGAGCTCTGCCGAACTATCTTCTGTTGCATCGGTGAGCTCGAACTCAGACGGTGGATCTTTCCCCTTGCCTGCAGGCTTCACCGCCGCCGTTGACTCTCCTTCAGACGATAGTGAGTTCTCCGAAACTGTCCTCAAGTACATAAACCAGATACTTATGGAAGAGAACATAGAGGAGAAGCCTTGTATGTTTTATGATCCTTTGGGGCTTAAACACACAGAGAAATCGTTCTACGATGTTCTAAACAAAAGCTACCCTTCTTCCCCTAACCAGCCTTCTCTGTCTATCGAGAGTCCGAGCAGTGATCATGGAAGTAATGGTAGCACTACTAGTCTCAGCAACTACGCTGATCACCAGCGGATGAGTAATTTTGGAGAGACTAACCAGTACTTATCCCAGACATCTTTGGCTGGCGAATCCGTCTTTCTTTCCAAAGTTGAGTCTAGTTCACAGGCTCTTGGTCATAATCAAAACAGTCTGAGATTCAACGGTGAGGACCTGGTTTCCGAGCTGCTGGCTCAGAATATTTATAGCAATAGTGAATCAGTCTTACAGTTCAAGAAAGGATTAGAAGAGGCTAGTAAGTTTCTGCCTGAAGGTAATCAACTATTTCTAAATTCGTGGAGCAGCTTGACGAAGGGAGAGGCTGCACAGACGAATGACGTTGTAGAGAAGGCTAAGATCGAGAAAGAAAATTCATCGAAAACTTTAGAAGAGATGAATTCTCCGAACAAATCGAAGGGAAGGAAGAATCGTGAAAGGGAAGATGAAGATATGTATTCAGAAGAAGGGCGAAGTAACAAGCAATCGGCAGTGTATGTCGATGAGAGTGAGCTTGTCGACGAGAGTGAGCTATCTGAGATGTTTGATAGAGTGTTGCTTCATGGAGACGGAAAAAAATTTGATGGACTATGTAATGGAATTGAAAAGCAGGAAGATGAAGCATGTAAGAAAGATCAGATAAAAAAAGAGCCTCAAACAGCAAATGGAGGGAGAGCTCGAGGAAAGAGACAGGGAAAGAAAACGGAAAATGTGGATTTGACGACCCTTTTGATCCAATGCGCTCAATCTGTAACGAATGATGATCGAAGGTCAGCTAACGAATTGATTAAGCAGATAAGGCAGCATTCGTCGCCGATTGGGGATGGCTCCCAGAGATTAGCTCATTACTTTGCTAATGCTCTCGAGGCCAGGTTGGCCGGGACGGGGACCGGAACCAAATTATTCTTCACTTCCCTAGCTTCCAAGAAGATTTCGGCCTTTGATATGTTGAAATCTTACCAAGTTAACCTTGCGGCCTGTCCTTTCAAGAAGATTTCCTTATTTTTCGCGAATAAAATGATTTTTAAGTTTGCGGAGAAAGCAGAAACCCTTCACATCATAGACTTCGGCATTCTTTATGGATTCCAATGGCCAATCCTAATTCAGCATCTGTCATTACTTCCCGGTGGACCTCCCAAGTTAAGAATTACGGGTATAGAGTTTCCTCAATCTGGCTTCCGCCCCGCCGAGAGAATCGAGGAGACTGGGCATCGATTGGAAAAATATTGCAATCGATTTAACGTTCCTTTTGAGTATAATGCCATAGCTTCGCGTAATTGGGAAACTATCCAGATCGAGGATCTTAAACTCAGAAGCAACGAGGTGATTGCTGTGAACTGTCTGTTCAGGTTCAAGAACTTACTCGACGAGACAGTCGAAGAAAACAGTCCGAAGAATGCTCTTCTGAGCCTAATCAGGAGGATCAATCCTAATATTTTTGTGCATGCGATTGCCAATGGATCCTACAATGCCCCATTCTTCATCACACGATTCAAAGAAGCGCTCTTTTACTACTCTGCTTTGTTCGATATGTTTGATACCAATATATCTCGCGAAAACGAACAACGAATGATGTTCGAGAGAGAGTTCTTCGGACGAGAAGCCATGAACGTCATTGCATGCGAGGGCATAGACAGAGTCGAGAGGCCTGAAACGTATAAACAATGGCAGACGAGGTCCTTGAGGGCAGGTTTCAGACAGCTTCCTCTGGACAAAGAGCTGATGGACAAATTTAGAAGCAAGTTGAAAATGAATTATCACAAAGACTTTGTACTCGATGAAGATGGCAATTGGATGCTTCAAGGATGGAAGGGTCGGATTGTCTTTGCTTCCAGTTGCTGGGTACCGGCCTAA 2367 43.85 MDPQIPSFSDSGNGFEINYDNLVSYFPNLANDFKFEVPSPDLNFMENALFLHELDQGELAPAVSASSAELSSVASVSSNSDGGSFPLPAGFTAAVDSPSDDSEFSETVLKYINQILMEENIEEKPCMFYDPLGLKHTEKSFYDVLNKSYPSSPNQPSLSIESPSSDHGSNGSTTSLSNYADHQRMSNFGETNQYLSQTSLAGESVFLSKVESSSQALGHNQNSLRFNGEDLVSELLAQNIYSNSESVLQFKKGLEEASKFLPEGNQLFLNSWSSLTKGEAAQTNDVVEKAKIEKENSSKTLEEMNSPNKSKGRKNREREDEDMYSEEGRSNKQSAVYVDESELVDESELSEMFDRVLLHGDGKKFDGLCNGIEKQEDEACKKDQIKKEPQTANGGRARGKRQGKKTENVDLTTLLIQCAQSVTNDDRRSANELIKQIRQHSSPIGDGSQRLAHYFANALEARLAGTGTGTKLFFTSLASKKISAFDMLKSYQVNLAACPFKKISLFFANKMIFKFAEKAETLHIIDFGILYGFQWPILIQHLSLLPGGPPKLRITGIEFPQSGFRPAERIEETGHRLEKYCNRFNVPFEYNAIASRNWETIQIEDLKLRSNEVIAVNCLFRFKNLLDETVEENSPKNALLSLIRRINPNIFVHAIANGSYNAPFFITRFKEALFYYSALFDMFDTNISRENEQRMMFEREFFGREAMNVIACEGIDRVERPETYKQWQTRSLRAGFRQLPLDKELMDKFRSKLKMNYHKDFVLDEDGNWMLQGWKGRIVFASSCWVPA 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1717763 1720129 - Bma024863.1 Bma07g00096 85233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00096 788 PANTHER SCARECROW-LIKE PROTEIN 34 69 787 - -
Bma07g00096 788 MobiDBLite consensus disorder prediction 152 178 - -
Bma07g00096 788 MobiDBLite consensus disorder prediction 293 328 - -
Bma07g00096 788 MobiDBLite consensus disorder prediction 293 334 - -
Bma07g00096 788 ProSiteProfiles GRAS family profile. 402 786 IPR005202 -
Bma07g00096 788 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 69 787 IPR005202 -
Bma07g00096 788 Pfam GRAS domain family 412 785 IPR005202 -
Bma07g00096 788 MobiDBLite consensus disorder prediction 377 405 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01386 Bma-Chr4:47742313 Bma07g00096 Bma-Chr7:1717763 0 dispersed
Bma07g00096 Bma-Chr7:1717763 Bma14g00513 Bma-Chr14:5703080 2.24E-06 dispersed
Bma14g00512 Bma-Chr14:5700409 Bma07g00096 Bma-Chr7:1717763 5.45E-07 wgd
Bma03g00133 Bma-Chr3:1012298 Bma07g00096 Bma-Chr7:1717763 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57568 PF03514 GRAS 5.60E-115 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00096 - - jre:109002667 849.351