Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00098 AGAGAGAAAATGGCGATCTTCATAGCATCCCTAGCTTGCCTTGTATCAGTAATGTGGGTGGCTGAAGCCAGGATTCCAGGAGTTTACGGCGGCGGAGCATGGGAAACAGCGCATGCTACCTTCTATGGAGGTTCCGACGCCTCTGGTACAATGGGAGGAGCTTGTGGGTATGGCAATCTGTACAGCCAGGGTTACGGTGTGAACACGGCGGCGCTCAGCACAGCGTTGTTCAACAGTGGCCTGAGCTGTGGCGCCTGCTTCGAGATAAAGTGTGCTAACGATCGACAATGGTGCCATTCAGGAAGCCCATCAATCTACATTACTGCTACTAACTTCTGTCCTCCCAACTTCGCTCTTCCAAACGACAATGGCGGTTGGTGCAACCCACCTCGCCCCCACTTCGACCTTGCTATGCCTATGTTCCTCAAGATCGCCGAATACCGCGCTGGAATCGTACCCGTCGCTTACCGCCGAGTGCCATGCCGGAAGCAGGGCGGGATGAGATTCACGATCAATGGATTCCGGTACTTCAACTTGGTTCTGATATCGAACGTCGCCGGTGCCGGGGACATCGTGAGGGTGAGCGTAAAGGGGACGAGGACGGGATGGATGAGCCTGAGCAGAAACTGGGGTCAAAACTGGCAGTCAAACGCAGCTTTGGTAGGGCAGTCATTGTCATTCAGGGTGACAGGCAGTGACAGAAGAACCTCCACCTCCTGGAACATCGTTCCGGCCCATTGGCAATTCGGTCAAACTTTCACCGGCAAGAACTTCAGAATATGA 783 54.15 REKMAIFIASLACLVSVMWVAEARIPGVYGGGAWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDRQWCHSGSPSIYITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGMRFTINGFRYFNLVLISNVAGAGDIVRVSVKGTRTGWMSLSRNWGQNWQSNAALVGQSLSFRVTGSDRRTSTSWNIVPAHWQFGQTFTGKNFRI 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1745475 1746588 + Bma024867.1 Bma07g00098 85235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00098 260 SUPERFAMILY PHL pollen allergen 163 255 IPR036749 -
Bma07g00098 260 SUPERFAMILY Barwin-like endoglucanases 33 184 IPR036908 -
Bma07g00098 260 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Bma07g00098 260 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Bma07g00098 260 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Bma07g00098 260 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Bma07g00098 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Bma07g00098 260 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Bma07g00098 260 Pfam Lytic transglycolase 69 156 IPR009009 -
Bma07g00098 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 166 IPR007112 -
Bma07g00098 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 255 IPR007117 -
Bma07g00098 260 PANTHER EXPANSIN 6 259 - -
Bma07g00098 260 SMART dpbb_1 69 156 IPR007112 -
Bma07g00098 260 Gene3D - 167 258 IPR036749 -
Bma07g00098 260 PRINTS Expansin signature 105 115 IPR002963 GO:0009664
Bma07g00098 260 PRINTS Expansin signature 241 257 IPR002963 GO:0009664
Bma07g00098 260 PRINTS Expansin signature 212 233 IPR002963 GO:0009664
Bma07g00098 260 PRINTS Expansin signature 165 177 IPR002963 GO:0009664
Bma07g00098 260 PRINTS Expansin signature 64 78 IPR002963 GO:0009664
Bma07g00098 260 PRINTS Expansin signature 141 154 IPR002963 GO:0009664
Bma07g00098 260 PRINTS Expansin signature 177 198 IPR002963 GO:0009664
Bma07g00098 260 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Bma07g00098 260 PRINTS Expansin signature 124 141 IPR002963 GO:0009664
Bma07g00098 260 Pfam Expansin C-terminal domain 167 244 IPR007117 -
Bma07g00098 260 PANTHER EXPANSIN-A15 6 259 IPR002963 GO:0009664
Bma07g00098 260 Gene3D - 21 162 IPR036908 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00098 Bma11g00114 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00098 Bma-Chr7:1745475 Bma15g00149 Bma-Chr15:1543263 9.96E-124 dispersed
Bma01g01865 Bma-Chr1:68418003 Bma07g00098 Bma-Chr7:1745475 1.26E-164 wgd
Bma11g00114 Bma-Chr11:1110498 Bma07g00098 Bma-Chr7:1745475 0 wgd
Bma04g00671 Bma-Chr4:6450942 Bma07g00098 Bma-Chr7:1745475 4.07E-163 wgd
Bma07g00098 Bma-Chr7:1745475 Bma08g01113 Bma-Chr8:50094989 4.54E-153 wgd
Bma07g00098 Bma-Chr7:1745475 Bma08g01001 Bma-Chr8:49073113 1.16E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00098 - - jre:108992990 502.671