Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00116 ATGAGGACTCACCGGACTCTTTCTGAATCGTGGATTGACGAGAATATCGAAGTTGCGGAGGCTCTGTTCAGAAAGTGGGACTCTGCTCCGGCCTCCGGCACTTCTCTTTTCTTTGCGGATCGGGAAGATGCCAAACAGTATCTTAAATCTGTTAAAGATTTGCAGGCTTCTATGCACTATCTTGTTTCTGAACACAAGAGGTCTGAGAAGTTTGCGCACGCACAGAGTTTGATGCAAACTGCCATGAAGAGGCTTGGGAAAGAGTTCTACGAGATTTTGTCTGCCAACAGAGACCATTTGGGCCAACTTTCGACCAACTCGTCAAGATCATCGGAGATGTCGAGTTTTACCTCCGATCTGGAAGACGCTTCGGAGGACGAGTTTCATTTTGCCACTCCGAGCGCGACTGGGGTTGAGCGAGTTTCAGCGACTGCTATGGCGGATCTGAAATCTATTGCTGACTGTATGATCTCCGTCGGACACGGTAAAGAGTGCGTCAAAATTTACAATATTTGCAGGAAATCGATTATCGACGAGGGGCTCTATCGCCTTGGAGTTGAAAGGCTGAGCTTTCATCAGGTTCATCACATGGATTGGGAGGTTTTGGAGAAAAAGATTAAAATTTGGTTGAAGGCCGTGAAAACCGCCGTCGGAACCCTTTTCGAGGGAGAGAGAATACTCTGCGATTGCGTCTTCTCCTCGTCGGACTCTCTCAGAGAGTCGTGCTTCAGTGAAATTTCTAAAGAGGGTGCGATGAATCTGTTTGGATTCCCGGAATTGGTGGCGAAGTGCAAGAAAACACCTGAGAAAATTTTTTCAACACTAAACATCTATGAGGTCATCAACGACCTTTGGCCTGTGATCGAATCGGTTTTTTCTTTCGAATCGACCGCCGTAATCCGTTCACAGGTGTCTCATTTGCTCGTCAAGCTCGGCGAGGGAGTTCGCGTTATGTTATCCGATTTCGAAACAGCAATCCAGAAGGATTCGACAAAAACTCCGGTCCCGAACGGCGGAGTTCACCCGCTCACGCGATATGTTATGAACTACATTTCCTTTCTCTCCGATTACAGCGGAATACTTGCCGATATAGTTGCCGACTGCCCGCTAACTTCGCACTCTCAGCTTCCAGAATCTTACTTAAAGAGCCTCAAGTCCGACGAAAATCCGATCGCCGTCCGGCTTGCATGGCTGGTTCTTGTTCTCATCTGCAAAATCGACGGTAAAGCTCAGCCTTACAACGATGTAGCACTCTCTTACATCTTTTTGGCCAACAATCTCCACTACGTCGTCTTGAAAGTACGTACCTCGAACCTCAAGTTCCTGTTCAGAGACGAATGGATTACAGAGCACGAGTCAAAGGTCAAACAATACTTGTCCAACTACGAACGAATCGGCTGGAACAGAGTTTTCTCATCGTTGCCGGATAATCCAACGGCCTTGATTTCACCGGAGGAAGCGAGAGAGTATTTCAGTAGGTTCAACGTAGCATTCGAAGAAACATACCGGAAACAAACTTCGTGGGTCATAACTGACCAGAAACTCCGGGATGAAATCAAAGTCTCTCTCGGAAAGAAACTTGGGTTTCTATACGGGAACTTTTACGAGAAACATCAAGTCGAGTTGATGAGAGAGCATGGAAATGGATCGGGTTCTGTCGTCAGATTTTCCCCCGACGACATCGGAAATTACTTGTCGGATTTGTTTTACGGGGCCAGCATTTCAGGGAGTGTTTCGTCGTCCTCCTCATCGTCTTCTTCTTCGTCGTCGCCCTTGCGGCGGATGCTTCATCACTGA 1797 47.47 MRTHRTLSESWIDENIEVAEALFRKWDSAPASGTSLFFADREDAKQYLKSVKDLQASMHYLVSEHKRSEKFAHAQSLMQTAMKRLGKEFYEILSANRDHLGQLSTNSSRSSEMSSFTSDLEDASEDEFHFATPSATGVERVSATAMADLKSIADCMISVGHGKECVKIYNICRKSIIDEGLYRLGVERLSFHQVHHMDWEVLEKKIKIWLKAVKTAVGTLFEGERILCDCVFSSSDSLRESCFSEISKEGAMNLFGFPELVAKCKKTPEKIFSTLNIYEVINDLWPVIESVFSFESTAVIRSQVSHLLVKLGEGVRVMLSDFETAIQKDSTKTPVPNGGVHPLTRYVMNYISFLSDYSGILADIVADCPLTSHSQLPESYLKSLKSDENPIAVRLAWLVLVLICKIDGKAQPYNDVALSYIFLANNLHYVVLKVRTSNLKFLFRDEWITEHESKVKQYLSNYERIGWNRVFSSLPDNPTALISPEEAREYFSRFNVAFEETYRKQTSWVITDQKLRDEIKVSLGKKLGFLYGNFYEKHQVELMREHGNGSGSVVRFSPDDIGNYLSDLFYGASISGSVSSSSSSSSSSSSPLRRMLHH 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1844124 1845920 + Bma024887.1 Bma07g00116 85253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00116 598 Pfam Exo70 exocyst complex subunit 209 567 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bma07g00116 598 SUPERFAMILY Cullin repeat-like 41 569 IPR016159 -
Bma07g00116 598 MobiDBLite consensus disorder prediction 576 598 - -
Bma07g00116 598 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 580 - -
Bma07g00116 598 Gene3D Exocyst complex component Exo70 22 576 - -
Bma07g00116 598 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 580 IPR004140 GO:0000145|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00116 Bma14g00483 CCT
Bma07g00116 Bma11g00137 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00116 Bma-Chr7:1844124 Bma03g01256 Bma-Chr3:21081145 7.25E-99 dispersed
Bma01g01893 Bma-Chr1:69735239 Bma07g00116 Bma-Chr7:1844124 3.47E-143 wgd
Bma11g00137 Bma-Chr11:1219355 Bma07g00116 Bma-Chr7:1844124 0 wgd
Bma14g00483 Bma-Chr14:5467529 Bma07g00116 Bma-Chr7:1844124 0 wgd
Bma03g00313 Bma-Chr3:2334721 Bma07g00116 Bma-Chr7:1844124 0 wgd
Bma04g00649 Bma-Chr4:6249251 Bma07g00116 Bma-Chr7:1844124 4.92E-164 wgd
Bma07g00116 Bma-Chr7:1844124 Bma08g00969 Bma-Chr8:48666134 2.61E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00116 K07195 - vvi:100248374 710.679