Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00120 ATGGGTAAAGGAGGGGAAGACTATGGGAGAAAGCACATCTCCGTTGTTGACTCTTCCATTGAAGAAACTTTTCCTGCATGGGCTAATGATGTTCGAGAATGCGAAGATAAGTACCAAGTGAACCGAAATTTTGGGTTATCATCACAAGACGTGGTCAAACAAAGAAAGATACACGGTTGGAATGAATTGGATAAGCATGAAGGCACTTCAATCTTTAAACTGATTTTGGAACAGTTTAATGACACTCTTGTCAGGATATTATTAGTTGCTGCGGTAGTGTCTTTTATTCTTGCCTGGTATGATGGGGAGGAAGGTGGCGAAATGGAGATTACTGCATTTGTGGAACCACTTGTAATTTTCTTGATCTTGATTGTTAATGCTATTGTGGGAATTTGGCAGGAAAGCAATGCTGAGAAAGCATTAGAAGCTTTGAAAGAAATTCAGTCGGAGCAGGCAACAGTGGTTCGAGATGATAAACGGATACCAAATTTGCCTGCAAAGGAACTTGTTCCTGGTGATATAGTGGAATTGAGGGTCGGGGATAAAGTGCCTGCTGACATGCGAGTTTTGAGTTTAATCAGCTCTACTTTCCGAATTGAGCAGGGGTCATTGACTGGTGAGAGTGAAGCAGTCAGCAAGACTGTTAAGGTTGTGCCAGAAAATACAGATATACAAGGGAAGAAATGTATGGTTTTTGCGGGGACAACTGTGGTGAATGGGAATGCCATATGCTTAGTTACCCAGATAGGGATGGATACCGAGATAGGGAAAGTGCATTCACAGATTCAAGAAGCATCTTTAAGTGAGGAAGATACCCCATTAAAAAAAAAGTTGAATGAGTTTGGAGAGCTTCTAACAATTATTATTGGAGTGATTTGTGCACTGGTATGGCTTATAAATGTGAAGTACTTTCTCACCTGGGAATATGTTGATGGATGGCCGAGGAACTTTAAGTTCTCATTTGAGAAGTGCACGTATTACTTTGAGATTGCTGTGGCATTGGCTGTTGCTGCTATTCCAGAAGGTCTGCCTGCTGTTATAACAACATGCTTGGCACTTGGCACGCGAAAAATGGCTCAAAAGAATGCACTTGTTCGAAAGTTGCCTAGTGTTGAAACTCTTGGTTGTACGACGGTCATATGTTCTGATAAAACAGGTACTTTGACAACCAATCAGATGGCTGTGGCTAAACTTGTGGCTCTTGGTTCTAGATCTGGTACTATTCGGGAATTTGATGTGGAAGGGACCACATATAACCCTTTTGATGGAAGAATACATGACTGGCCTAAGAATAGAATGGATGTTAATCTTCAAATGATTGCAAAGATTTGTGCTATCTGTAATGATTCAAGTGTTGAGCAATCTGGACATCAGTTTGTTGCCAATGGTCTGCCCACTGAAGCAGCATTAAAGGTTTTGGTGGAGAAAATGGGAATTCCTGAAGAACTTGTTTCTGGGTCACATTCTGCTCATAGAGATACACTGCGTTGCTGTCAACAATGGAATGAAATGCAACGGAGGATTGCAACTCTGGAGTTTGATCGAGATCGAAAATCCATGGGAGTGATTGCTTCTTCTACCTCAGGAAGTAATTTATTACTAGTAAAGGGCGCAGTGGAAAATCTCTTAGAGCGAAGTTCATATATTCAGTTGCTTGATGGCTCTGTAGTGGAACTGGATGATTATTCAAGGAAGGTTATCTTAGAAAGCCTTCGTGAAATGTCCACTGGTGCATTGAGATGTTTGGGTTTTGCATATAAGGAAGACCTTGGAGAGTTTTCGCAATATAATGGAGATGAAGATCATCCCGCTCACGAGCTTTTACTTAACCCATCCAATTACTCCTTAATTGAGAGTAATTTGATCTTTGTTGGTTTGGTGGGGCTGAGGGATCCTCCTCGGAAAGAGGTACGTCAAGCTATTGAAGACTGCAAAGCTGCAGGAATTCGCGTCATGGTTATAACAGGGGACAACAAGAATACAGCTGAAGCTATATGCCGTGAAATAGGTGTATTTGGATCTCATGAAAATATTATCTCAAAAAGCTTGACAGGAAGAGAATTCATTGATATGGACCATCAAAGTCAGAAAACTCATTTTGGACAAAGTGGAGGGCTCCTGTTCTCTAGGGCTGAACCAAGACATAAACAAGAGATTGTCAGGTTACTCAAGGAGAACAGTGAAGTTGTTGCTATGACCGGAGATGGAGTCAATGATGCACCTGCCCTTAAATTAGCCGATATTGGGATTGCAATGGGCATTGCAGGGACCGAGGTTGCTAAGGAAGCCTCTGACATGGTGCTAGCAGATGATAATTTTAGCTCTATAGTTGCTGCAGTTGGTGAAGGAAGATCTATCTACAACAATATGAAGGCATTTATAAGGTACATGATTTCTTCAAATATTGGTGAGGTTGCCTCCATATTTTTGACAGCTGCTCTGGGTATTCCTGAAGGCATGATCCCTGTTCAGCTTCTCTGGGTCAATCTTGTCACAGATGGCCCCCCTGCAACGGCACTCGGATTCAATCCTCCAGACAAAGACATAATGAAGAAGCCCCCACGAAGAAGTAATGATTCATTGATTACTGCTTGGATTTTGTTCCGCTATCTGGTTATCGGACTCTACGTGGGAATAGCCACGGTTGGAGTGTTTGTCATCTGGTACACTCATTCTTCATTCTTAGGCATTGACTTGAGTGGGGATGGCCATAGTCTTGTTACCTACTCCCAACTTGCGAGCTGGGATCAATGCCCCTCTTGGGAAGGATTCTCCGTCTCGCCCTTTTCAGCTGGCGCTCAAGTCTTCAATTTCGACTCGAATCCATGCGATTATTTCCAGTCCGGTAAAATCAAGGCCTCCACACTCTCTCTTTCCGTCTTGGTCGCAATTGAGATGTTCAATTCCCTCAATGCACTTTCTGAAGATGGGAGTCTTCTCACAATGCCTCCTTGGGTCAACCCTTGGCTCCTTCTCGCCATGTCCATCTCATTTGGACTGCACTTTCTCATCCTTTATGTGCCATTCTTGGCTCAAGTGTTTGGCATAGTACCTCTTAGTTTAAACGAATGGCTCCTGGTCTTGGCGGTTGCTCTTCCCGTGATTATAATTGATGAGATTTTGAAGTTTGTGGGCAGGTCTACGAGTGGATTCAGGATTTCCGGTTCGACCAAATCTTCGAAGTGGAAATCAGAGTAG 3198 42.87 MGKGGEDYGRKHISVVDSSIEETFPAWANDVRECEDKYQVNRNFGLSSQDVVKQRKIHGWNELDKHEGTSIFKLILEQFNDTLVRILLVAAVVSFILAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQESNAEKALEALKEIQSEQATVVRDDKRIPNLPAKELVPGDIVELRVGDKVPADMRVLSLISSTFRIEQGSLTGESEAVSKTVKVVPENTDIQGKKCMVFAGTTVVNGNAICLVTQIGMDTEIGKVHSQIQEASLSEEDTPLKKKLNEFGELLTIIIGVICALVWLINVKYFLTWEYVDGWPRNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKLVALGSRSGTIREFDVEGTTYNPFDGRIHDWPKNRMDVNLQMIAKICAICNDSSVEQSGHQFVANGLPTEAALKVLVEKMGIPEELVSGSHSAHRDTLRCCQQWNEMQRRIATLEFDRDRKSMGVIASSTSGSNLLLVKGAVENLLERSSYIQLLDGSVVELDDYSRKVILESLREMSTGALRCLGFAYKEDLGEFSQYNGDEDHPAHELLLNPSNYSLIESNLIFVGLVGLRDPPRKEVRQAIEDCKAAGIRVMVITGDNKNTAEAICREIGVFGSHENIISKSLTGREFIDMDHQSQKTHFGQSGGLLFSRAEPRHKQEIVRLLKENSEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSSIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSNDSLITAWILFRYLVIGLYVGIATVGVFVIWYTHSSFLGIDLSGDGHSLVTYSQLASWDQCPSWEGFSVSPFSAGAQVFNFDSNPCDYFQSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSISFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLAVALPVIIIDEILKFVGRSTSGFRISGSTKSSKWKSE 1065
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1932200 1937542 + Bma024892.1 Bma07g00120 85257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00120 1065 Gene3D - 45 263 - -
Bma07g00120 1065 SUPERFAMILY Calcium ATPase, transmembrane domain M 26 1046 IPR023298 -
Bma07g00120 1065 PANTHER CALCIUM-TRANSPORTING ATPASE 4 1064 - -
Bma07g00120 1065 Pfam Cation transporting ATPase, C-terminus 818 1044 IPR006068 -
Bma07g00120 1065 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Bma07g00120 1065 SFLD p-type atpase 362 785 IPR044492 -
Bma07g00120 1065 Gene3D - 391 632 IPR023299 GO:0000166
Bma07g00120 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 320 402 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma07g00120 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 707 817 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma07g00120 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 118 308 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma07g00120 1065 Gene3D - 77 1046 - -
Bma07g00120 1065 Pfam haloacid dehalogenase-like hydrolase 378 747 - -
Bma07g00120 1065 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 4 1064 - -
Bma07g00120 1065 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 629 IPR023299 GO:0000166
Bma07g00120 1065 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Bma07g00120 1065 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Bma07g00120 1065 PRINTS P-type cation-transporting ATPase superfamily signature 733 752 - -
Bma07g00120 1065 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Bma07g00120 1065 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Bma07g00120 1065 PRINTS P-type cation-transporting ATPase superfamily signature 647 657 - -
Bma07g00120 1065 PRINTS P-type cation-transporting ATPase superfamily signature 757 769 - -
Bma07g00120 1065 PRINTS P-type cation-transporting ATPase superfamily signature 625 636 - -
Bma07g00120 1065 SUPERFAMILY HAD-like 379 837 IPR036412 -
Bma07g00120 1065 Pfam E1-E2 ATPase 147 361 - -
Bma07g00120 1065 Gene3D - 378 778 IPR023214 -
Bma07g00120 1065 SFLD Haloacid Dehalogenase 362 785 - -
Bma07g00120 1065 SUPERFAMILY Calcium ATPase, transduction domain A 150 260 IPR008250 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00120 Bma11g00140 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00029 Bma-Chr5:1921296 Bma07g00120 Bma-Chr7:1932200 0 dispersed
Bma07g00120 Bma-Chr7:1932200 Bma13g01184 Bma-Chr13:45120643 3.65E-101 dispersed
Bma08g00475 Bma-Chr8:22724207 Bma07g00120 Bma-Chr7:1932200 0 transposed
Bma11g00140 Bma-Chr11:1239187 Bma07g00120 Bma-Chr7:1932200 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00120 K01537 - tcc:18590783 1816.97