Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00127 ATGCGAGACTTTATTAACAAATTACCTCCCATGGATCTGATGCGTTCTGAGAAGATGACTTTAGTCCAGCTTATCATTCCCGTCGAGTCTGCTTTCCGTGCTGTCTCTTATATCGGCGACCTAGGACTCCTCCAATTTAGAGACTTAAACGCTGATAAAAGTCCATTCCAACGAACATTTGTGAACCAGTATAAGTATAAGATGTTTTCACAGGTAAAGAGATGTGCAGAAATGTCAAGAAAACTACACGTTTTTAAAGATCAAATCTCTAAAGCTGGTCTAACATCTTCTCTCCGCCCGGTTCTGCAACAAGATATTGAGCTAGAGGATTTAGAGGTACAACTAGCAGAGCATGAACATGAGATGATAGAAATGAACTTGAACAGTGAAAGGCTTCGTCAATCATATAACGAACTTCTCGAGTTCAAGATGGTATTGCAAAAGGCAGTTGGCTTCCTTGTATCAACGAATCGCGCAGTTGAGGAGAGGGAATTAGACGAAAATGTTCATTTCAATGATGAATATGCTGAAACAGCATCATTACTTGAACAGGAGATGAGACCAGGACCATCAAACCAATCTGGCTTAAGATTTATCAGCGGGATCATTTGTAAATCTCAAATTCTGAGGTTTGAAAGGATGTTGTTTCGTGCCACAAGAGGAAATATGCTTTTTAATCAAGCATTAGCTGATGATCAGATCGTGGATCCGGTGACCTTGGAAATGGTTGAGAAATCAGTATTTGTAGTCTTTTTCTCTGGAGAGCAGGCCAGAACAAAGATTATGAAAATCTGTGAGGCTTTTGGAGCAAATTGTTATCCTGTGCCTGAGGATGTAACCAAGCAGAGGCAAATAACCAGAGAAGTTTCATCGCGTCTAACTGATCTGGAAGCCACTCTGGATGCTGGGATCAACCACCGAAATAAAGCCCTTACATCTATAGGATTTCACCTACCAAAATGGATGAATATGGTAAGAAGGGAAAAGGCTGTATATGATACATTGAATATGTTAAACTTTGATGTTACCAAAAAATGTCTTGTTGGAGAAGGCTGGTGCCCAATATCTGCTAAAACTCAGATTAAGGAGTCATTGCAACGGGCATCATTTGATAGTAGCTCACAAGTGGGCATAATTTTTCACGAGATGGATAGTACAGAATCACCTCCTACGTATTTCAAAACAAACAGTTTCACGAGTGCTTATCAAGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCTAATCCTGCAGTTTACACTGTTATTACATTTCCTTTTCTCTTTGCGGTGATGTTTGGAGATTGGGGTCATGGAATATGTTTGTTACTAGGAGCTTTATTTCTTCTAGCGCGTGAAAGTAAGTACAGCTCTCAGAAACTTGGAAGCTTTATGGAGATGTTATTTGGTGGGCGCTATGTACTACTTTTGATGTCACTGTTTTCAATATATTGTGGGTTGATTTACAATGAATTCTTCTCTGTCCCATTTCATATATTCGGTGGGTCTGCATACAAGTGTCGAGATCCTACGTGCAGTGATGCATACACCGTGGGCTTAGTCAAATACCGAGATCCATATCCACTTGGTGTGGACCCAAGTTGGCGAGGAAGTCGTACAGAACTTCCATTTTTGAACTCTCTTAAAATGAAGATGTCTATTTTGCTGGGTGTGGCCCAGATGAACTTAGGAATCATCTTGAGTTACTTCAACGCACATTTTTTTGGCAGTTCACTCGACATAAGGTATCAGTTTGTGCCACAGATGATTTTCCTTAACAGCCTTTTTGGGTATCTTTCTCTCCTCATTGTCATCAAGTGGTGCACTGGTTCTCAAGCAGACCTCTATCATATTATATTGTTGCTTTTGGCCTTGGTTGCAGTACCATGGATGCTCTTTCCAAAACCTTTTATTCTGAAAAGACTTTATTCAGAGAGATTTCAAGGTCGGACTTATGGAATGCTTGGAACCACAGAGATGGATCTTGAAGTGGAGCCTGATTCAGCAAGGCATAACCATGAAGATTTTAATTTTAGTGAGGTCTTTGTTCATCAAATGATACACTCCATAGAGTTTGTCTTAGGTGCTGTTTCAAATACAGCATCTTATCTTCGACTTTGGGCTCTAAGCTTGGCTCACTCAGAGTTGTCTACTGTCTTCTATGAGAAAGTCCTTCTCCTTGCTTGGGGGTATGACAATATTGTCATTCGATTGGTCGGGTTAGCAGTTTTTGCCTTTGCGACTGCTTTCATACTCCTCATGATGGAGACCCTCAGTGCTTTTCTTCATGCCCTGCGTCTTCATTGGGTGGAGTTTCAGAACAAGTTCTACCATGGCGATGGGTATAAGTTCAGGCCATTCTCATTCGCCTCCTTGGTTGAGGAAGATGATTAG 2400 40.75 MRDFINKLPPMDLMRSEKMTLVQLIIPVESAFRAVSYIGDLGLLQFRDLNADKSPFQRTFVNQYKYKMFSQVKRCAEMSRKLHVFKDQISKAGLTSSLRPVLQQDIELEDLEVQLAEHEHEMIEMNLNSERLRQSYNELLEFKMVLQKAVGFLVSTNRAVEERELDENVHFNDEYAETASLLEQEMRPGPSNQSGLRFISGIICKSQILRFERMLFRATRGNMLFNQALADDQIVDPVTLEMVEKSVFVVFFSGEQARTKIMKICEAFGANCYPVPEDVTKQRQITREVSSRLTDLEATLDAGINHRNKALTSIGFHLPKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPISAKTQIKESLQRASFDSSSQVGIIFHEMDSTESPPTYFKTNSFTSAYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALFLLARESKYSSQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGGSAYKCRDPTCSDAYTVGLVKYRDPYPLGVDPSWRGSRTELPFLNSLKMKMSILLGVAQMNLGIILSYFNAHFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIVIKWCTGSQADLYHIILLLLALVAVPWMLFPKPFILKRLYSERFQGRTYGMLGTTEMDLEVEPDSARHNHEDFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNIVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLVEEDD 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1993259 1999471 - Bma024900.1 Bma07g00127 85264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00127 799 Coils Coil 101 135 - -
Bma07g00127 799 PANTHER VACUOLAR PROTON ATPASE A1 6 621 - -
Bma07g00127 799 PANTHER VACUOLAR PROTON ATPASE A1 620 799 - -
Bma07g00127 799 Pfam V-type ATPase 116kDa subunit family 37 614 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma07g00127 799 Pfam V-type ATPase 116kDa subunit family 619 791 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma07g00127 799 PIRSF ATP6V0A1 612 799 IPR026028 GO:0000220|GO:0046961
Bma07g00127 799 PIRSF ATP6V0A1 9 619 IPR026028 GO:0000220|GO:0046961
Bma07g00127 799 PANTHER VACUOLAR PROTON ATPASES 6 621 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bma07g00127 799 PANTHER VACUOLAR PROTON ATPASES 620 799 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00566 Bma-Chr3:4689080 Bma07g00127 Bma-Chr7:1993259 6.34E-62 dispersed
Bma07g00127 Bma-Chr7:1993259 Bma08g00785 Bma-Chr8:45234372 0 dispersed
Bma07g00127 Bma-Chr7:1993259 Bma05g00148 Bma-Chr5:4434871 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00127 K02154 - zju:107411281 1367.06