Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00152 ATGGATTTGACGGGAGTAAGATCTGAAGCTCACGTCGCCCAACAAAGGCGCCGGGAAAGGCTAAGAGTGCAGCAAATTAATTCTGTTCAATCTATTATGACAGATGATCGCCCATTCTTTTTCCATTCAGAGTTAAGGCCAGATCTTGGTCAAGTTGGCAATGCAAGTTCTTTTTTTGACCCATCTTTTCTCCCCTCGGAAATGATCGGGTTTTCGTCGGATTTTAATGCTCTACCAGTACCTGCCCAAAGTGACTCAATCGGACGTCAGCAAATGTCAGAGAATACCCCCTTTCGTTTTAGATCGATCTCATCTAATTTCAATTCATCATCTAAAGTTCAACAACAAGCCGGTGATTGGATGTTAACTTATGGAAGTAGTTCATGGTCTGCGGAAAATAATCCCAATCTAATGATTTCCGACGAAGTAGGTAATGCTTCTGTTCATCAGCCATACTTGAACCCAAGTGACAGCCATTACTATAATTTTTCTGGTGACCAACTTCCTGAACCAGATCGCCACAAGCATGCAGGAGAAACTCAGTTCGTTTCTCCACCTTTTCAAAACACCCTGCCAGATGTAGTCGTTCCGGCGTCCATCCCAGAAAGCGGACAAGGAAGGTGGTCTAGTGCAAGTGAGCTTGCCAGTTTTTCATGGTTTAAAGATCAAGAAGATTTATTACGCTTTCAAAATTCTAGTTATTGGGGCGATAGATCAGTTCCAAATAGCTCTCAACAAGGTCTTTCTCTATCACTCTCATCAAATCCACCTTCCAAATCGCCGGCGTCTCAGCTTGAAGATGGCTGTGCGTCCGAAGATTTGGAGCAAAGCGGTGGTTTTTACATGTATCATCAAGATCCAGTCGCCGGAATATCTGGCTCTTTCAATTCAATATCAAAACCGTCCGCCATTAGTAAACGCTGTGGAAAGTCTATCCAAGAAATAATTGGCGTTCCTTCGAACACTTGCAGAAACACTGGTCCTCTCGGGCCTTTCACCGGCTACTCAATCATTTTGAAGCGTTCAAAATTTTTAAAGCCTGCCCAGCAATTATTAGATCAAATTTCTGGTAAAAGTGGATTACATTTTGGAAGAACACGCGACGTGTTGAATAGAACATCTGGAGAAGTCAGTGTCTCAGTTTCTGCTGATGTTTCCGATGCGACTGCAACTGAAGCTGTGTCCAAGAGTTATAACTTAACTTCTTCTTCGCCTATATTTTATGGTCCGAACGAAACTAGTGGTGTTAAATCCGGGAGCTTTTTCTCTGAACCAGTTCGTCTAGACATCCAAAGGAAGAAAGCTACGCTACTGTACATAATGGAAGAGGTATGCAGAAGATACAGACAGTATAATCAGCAAATGCAAATGGCTGTTTCGTCGTTTGAATCCGTTGCCGGGCTCGGATCGGCAATGCCATTCATGTCGTTTGCGTTGAAGACAGTCTCCAGGCAATTTAGGTGTCTGAAGAATGTAGTTTCCGACCAGTTGAGGCATGTCCGGCGAGGGACGGCTGAAGAATTAACGTCGCAAAAACTTGAAGGGAGTAGTAGCGAGCAGATCAGAGAAGGTGAAGAAAGCTTGAAAAATTATGGTTATGGCGATGATGGGGATGGCTTCCTATTGCTCCAACCCCATCAACATCTGTGGAAGCCCCAGCGAGGCCTACCTGAAAGAGCTGTTGTTATTCTTAGAGCTTGGCTTTTCGAACATTTTCTTCATCCCAGTATATGGACATGTATGTGTGCATCTGGTGGCTTCCCTAAAGTAACAGATGGAAGTGATAAATATAATTGTTTTACAGCCTGCAACTGCACTTCTGGAGGGTTGCCTAATGTAGCTCCAACCTCCAAAAGGCAGATATCTATCAAAGTGGTCGTGATTATTCTATTGCTTTGTGTAGTAATCACAACTTTTGCATTTCTAACCTCGGTGGTATGCTATCTTTCTCGAAGGGAAAAGTTCTCTATTCCCTCGTCGGCATTATCAGCATATGGACAAACTAGTTACAACAGTTTTAGCAACTTATTTAGTCACAAAAGTTCATCAATGTTAGAAATGAGAACTAATGCAGGTCCTCCCACTCATCATAGTGCAGGATGCTTCTACATAGCCTCTCGGCTATTGAAGACGAAACCTTGGACTATATTTGGAACCATTATTCAGTTCTCGTTCTCTGAATTGGAAAATTCAACCGATAAGTTTTCAGACTCCAACCTTGTAGGACGTGGGGGAAGTAGCCTCGTTTATCGTGGTCTGCTTAAAGATGGTAGTATTGTGGCAGTGAAGCGGCTGAAAACTCAAGGAGGTCTAGATGCTGACTCCTTATTTCCCACAGAGATAGAATTACTGTCCAGACTTCATCATTGTCATGTGGTGCCTTTACTTGGCTACTGCTTAGAATCCCAGGGGAAGCATACTGAGAAGCTACTGGTATACCAATACATGGCTAGGGGTAATCTGAGAGATTGCTTGGATAGTCCCACCAGGGAAAGCATGAATTGGGCTTCTCGTGTTGCAATTGCAATAGGTGCAGCTCGTGGCTTGGAATATCTTCACGAGGCCGCTGCTCCTAGAATTCTGCATAGAGATGTGAAATCAACCAACATTCTTCTACACGAGGATTGGCAAGCAAAAATCACTGATCTGGGGATGGCTAAAAGATTGAGTACTGATGGTCTACCCAGCTGTTCCAATTCTCCAGCCAGAATGCAAGGGACTTTTGGCTATTTTGCACCTGAGTATGCTATAATTGGAAGAGCCTCTCTTAAGTCTGATGTTTTCAGTTTCGGGGTCGTTCTTCTGGAGCTTATCACAGGTCAACATCCCATTAAGAAATCAGCTAATAAAGGAGAAGAAAGCCTTGTCATCTGGGCTACGCCTCGTTTACAGGACAGTCGGCGAGTAATTGCCGAGCTTCCTGATCCTCATTTGAAGGGACTATTCCCCGAGGAAGAGATGCAAATAATGGCTTACTTAGCAAAGGAGTGTCTGCTGTTGGATCCTGATGATAGACCAACTATGAGTGAAGTTGTTCAAATTCTTTCAACTATTGCTCCAGAAAAATCTCGGAGGAGAAATATTGCTGCAAATATTGGTCGGGTAATTAAATTATACTTTGGTCTTCTTCCTACAGTAACCAGAGTGGATTATATACAGAAAAGAGCCGAGTCAAGCCCTCTTTCAGAGCAACATTTACTAACTAAAACGAGCTCCGATGATGAAATGGAACTAAGACTAACGCCATCCTGCCGATCTCCGACTTGGGTGCATGATGGGTCAGATTGTATTGAAAATGAGAGTCGAGAAGATATTGTTTCAGCTGAGGATATGGGAAGATTATTACTCTCTAGTTCAACATCTAGGAGTTGTCGTGCTTCAGACGATGTAATAGTAGATCTATCTGAGCCTCAACTTGAATCATTCTGCCTGTCAAATTCTCGGCCTCTCCGATGA 3456 43.32 MDLTGVRSEAHVAQQRRRERLRVQQINSVQSIMTDDRPFFFHSELRPDLGQVGNASSFFDPSFLPSEMIGFSSDFNALPVPAQSDSIGRQQMSENTPFRFRSISSNFNSSSKVQQQAGDWMLTYGSSSWSAENNPNLMISDEVGNASVHQPYLNPSDSHYYNFSGDQLPEPDRHKHAGETQFVSPPFQNTLPDVVVPASIPESGQGRWSSASELASFSWFKDQEDLLRFQNSSYWGDRSVPNSSQQGLSLSLSSNPPSKSPASQLEDGCASEDLEQSGGFYMYHQDPVAGISGSFNSISKPSAISKRCGKSIQEIIGVPSNTCRNTGPLGPFTGYSIILKRSKFLKPAQQLLDQISGKSGLHFGRTRDVLNRTSGEVSVSVSADVSDATATEAVSKSYNLTSSSPIFYGPNETSGVKSGSFFSEPVRLDIQRKKATLLYIMEEVCRRYRQYNQQMQMAVSSFESVAGLGSAMPFMSFALKTVSRQFRCLKNVVSDQLRHVRRGTAEELTSQKLEGSSSEQIREGEESLKNYGYGDDGDGFLLLQPHQHLWKPQRGLPERAVVILRAWLFEHFLHPSIWTCMCASGGFPKVTDGSDKYNCFTACNCTSGGLPNVAPTSKRQISIKVVVIILLLCVVITTFAFLTSVVCYLSRREKFSIPSSALSAYGQTSYNSFSNLFSHKSSSMLEMRTNAGPPTHHSAGCFYIASRLLKTKPWTIFGTIIQFSFSELENSTDKFSDSNLVGRGGSSLVYRGLLKDGSIVAVKRLKTQGGLDADSLFPTEIELLSRLHHCHVVPLLGYCLESQGKHTEKLLVYQYMARGNLRDCLDSPTRESMNWASRVAIAIGAARGLEYLHEAAAPRILHRDVKSTNILLHEDWQAKITDLGMAKRLSTDGLPSCSNSPARMQGTFGYFAPEYAIIGRASLKSDVFSFGVVLLELITGQHPIKKSANKGEESLVIWATPRLQDSRRVIAELPDPHLKGLFPEEEMQIMAYLAKECLLLDPDDRPTMSEVVQILSTIAPEKSRRRNIAANIGRVIKLYFGLLPTVTRVDYIQKRAESSPLSEQHLLTKTSSDDEMELRLTPSCRSPTWVHDGSDCIENESREDIVSAEDMGRLLLSSSTSRSCRASDDVIVDLSEPQLESFCLSNSRPLR 1151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2145905 2157533 - Bma024924.2 Bma07g00152 85289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00152 1151 Pfam Associated with HOX 338 493 IPR006563 -
Bma07g00152 1151 Pfam Protein kinase domain 737 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00152 1151 SMART serkin_6 735 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00152 1151 Gene3D Phosphorylase Kinase; domain 1 709 815 - -
Bma07g00152 1151 PANTHER OS01G0750732 PROTEIN 577 1148 - -
Bma07g00152 1151 Gene3D Transferase(Phosphotransferase) domain 1 816 1036 - -
Bma07g00152 1151 ProSitePatterns Serine/Threonine protein kinases active-site signature. 860 872 IPR008271 GO:0004672|GO:0006468
Bma07g00152 1151 MobiDBLite consensus disorder prediction 245 269 - -
Bma07g00152 1151 CDD STKc_IRAK 741 1015 - -
Bma07g00152 1151 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE NCRK ISOFORM X1 577 1148 - -
Bma07g00152 1151 ProSiteProfiles Protein kinase domain profile. 735 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00152 1151 ProSitePatterns Protein kinases ATP-binding region signature. 741 763 IPR017441 GO:0005524
Bma07g00152 1151 MobiDBLite consensus disorder prediction 245 265 - -
Bma07g00152 1151 SMART prehox3 333 495 IPR006563 -
Bma07g00152 1151 SUPERFAMILY Protein kinase-like (PK-like) 714 1015 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00152 Bma-Chr7:2145905 Bma07g00491 Bma-Chr7:5987505 7.58E-72 dispersed
Bma07g00152 Bma-Chr7:2145905 Bma14g01795 Bma-Chr14:38539221 2.68E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66579 PF00069 Pkinase 7.30E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00152 - - vvi:100263865 679.093