Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00173 ATGGGCCAGATCCAGTACTCGGAGAAGTATTTCGATGACACTTACGAGTTCAGGCACGTGGTGCTTCCACCCGAAGTGGCAAAACTTCTTCCCAAGAATCGTCTGCTTTCCGAAAATGAATGGCGTGCAATTGGGGTTCAGCAGAGCCGTGGATGGGTACACTATGCAATTCATCGTCCTGAGCCACACATCATGCTATTCAGAAGGCCACTGAACTACCAACAGCAGCAGGAGAACCAAGTCGAGCAAAACGTTGTTGCTAACTGA 267 49.44 MGQIQYSEKYFDDTYEFRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQVEQNVVAN 88
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2281998 2282883 - Bma024946.1 Bma07g00173 85310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00173 88 Gene3D - 1 84 IPR036858 GO:0016538
Bma07g00173 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 84 - -
Bma07g00173 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 84 - -
Bma07g00173 88 SMART CKS_2 3 72 IPR000789 GO:0016538
Bma07g00173 88 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Bma07g00173 88 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Bma07g00173 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Bma07g00173 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Bma07g00173 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Bma07g00173 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00173 Bma14g00435 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00485 Bma-Chr6:22759195 Bma07g00173 Bma-Chr7:2281998 1.27E-40 transposed
Bma14g00435 Bma-Chr14:5061378 Bma07g00173 Bma-Chr7:2281998 2.32E-32 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00173 K02219 - gmx:100786340 157.532