Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00187 ATGGATACATTCAAGAATACATCTGAAATTGTTGAAGTCCTGGAAGAGTTAGATCCTCCACGCAGTGAAAGGAAAGAAAATGAGAAAGCTTCGAATGTAAGCTTGGGAGTCAAACAAAGTACTGTAGACACAGATTCTACTACACTCAGTCTCTCTTCTAATTGCTGTGACAAAACTAGATCTTTGGAGACAATTTCTGACGGGAGATCAAGATCTAGAGAAAAAGGGGAGTTTTCCCAAAGCTCAAAAAGTAGCCTTGCTGATTATAGCAGTAGTCCAAGCATTAGTGGACAAAGCATTGGCAGTGGCTCTAGTCGTTGTGGGAACAATCGGCCTCACATGTCAAAGAACTTGAGATGGGAAGCCATCCACAAGGTCCAGAATCAGCACAAAATCATGGGCTTGAGCAACTTCAAGATGCTCAGAAAGCTTGGACTTGGGGACATTGGGACTGTGTATCTTGCTGAGTTAATTGACACAAACTGTCTATTTGCATTGAAAGTGATGGGCAAGGACTTGTTGAGCAACAGGAAGAAAATGCTAAGGGCACAGACTGAGAAAGAGATACTGCACATGCTTGACCATCCTTTTCTTCCCACGCTGTATACTCACTTCGAGACCGATAACCTCATGTGCTTGGTCATTGACTACTGTCGAGGGGGAGATCTGCATGTGCTGCGGCAAAAGCAACCAAGCAGGAATTTCTCTGAGCGAGCAGTCAGTAATCTTTTGCTTACTATTTCTCCATTGAATAAAATTCATTTTGTGTTATTATTCAAATGTAATCAAATTAGTTCGAATAACTACTGGGATTTGATTAGTCAACTATCGTTCAATGCTAAATTTTTCGACTTGTTCCTCAATCTGGTTCTATTTTACGGGGCCGAGGTTCTTCTTGCCCTGGAGTACTTGCACATGCTAGGAGTCGTTTATCGAGACTTGAAGCCAGAAAATATACTGATCCGAGAAGATGGTCACATTATGCTTACAGACTTTGACTTATCACTCAGATGCGCCGTTAATACAAAGGTGCTTAAGACGTCAGCTCCTATCACGGGGCCTACGAAGAAGGTCTTAAGTCCATGCGATGAAAATGGCTGCATTCACCCATTATGCCTTCACCCATCTTGGGAAGTCCCTTGCTTCACTCCTAAAGATGTTTCCGCCCCATCAAAATCCCGAAAGATCAAATCCGACCCTGTTAGCCAGGTAAACCCATTACCACAGCTCGTAGTAGAGCCAATCAGTGCTCGCTCAAACTCTTTTGTGGGAACCCATGAATACCTTGCTCCAGAAATAGTCAAGGGCGAGGGCCATGGCAATGCTGTTGATTGGTGGACATATGGAGTTTTTCTCTTTGAATTGCTCTATGGGAAGACACCCTTCAAGGGTTCATCGAATGAGGACACATTAACCAACATAGCCTCACAGAGTCTTGCCTTCCCTGACATTCCCATCGTCAGTTTTCAGGCCAGAGATTTGATAAGAGGTTTACTGATAAAGGAGCCTGAAAATCGGCTGGGATCGGCTAAAGGGGCGGCGGAGATCAAGCAGCACCCGTTCTTCGGCGGCCTGAATTGGGCTCTAATACGATCCACTTCCCCTCCGGAATCGACTAGGTTTCCCGAGGTGGTGATAGGGGCAGGTTGGTTTGATCCATCAAAAAAGGAGAGCACAAAGCCTGAAGTGAATGAGAATACAGGTGAGGAGGATGTGGTGTTTGAGCTGTTTTAG 1734 44.69 MDTFKNTSEIVEVLEELDPPRSERKENEKASNVSLGVKQSTVDTDSTTLSLSSNCCDKTRSLETISDGRSRSREKGEFSQSSKSSLADYSSSPSISGQSIGSGSSRCGNNRPHMSKNLRWEAIHKVQNQHKIMGLSNFKMLRKLGLGDIGTVYLAELIDTNCLFALKVMGKDLLSNRKKMLRAQTEKEILHMLDHPFLPTLYTHFETDNLMCLVIDYCRGGDLHVLRQKQPSRNFSERAVSNLLLTISPLNKIHFVLLFKCNQISSNNYWDLISQLSFNAKFFDLFLNLVLFYGAEVLLALEYLHMLGVVYRDLKPENILIREDGHIMLTDFDLSLRCAVNTKVLKTSAPITGPTKKVLSPCDENGCIHPLCLHPSWEVPCFTPKDVSAPSKSRKIKSDPVSQVNPLPQLVVEPISARSNSFVGTHEYLAPEIVKGEGHGNAVDWWTYGVFLFELLYGKTPFKGSSNEDTLTNIASQSLAFPDIPIVSFQARDLIRGLLIKEPENRLGSAKGAAEIKQHPFFGGLNWALIRSTSPPESTRFPEVVIGAGWFDPSKKESTKPEVNENTGEEDVVFELF 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2396949 2400052 - Bma024961.1 Bma07g00187 85324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00187 577 SMART serkin_6 138 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00187 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Bma07g00187 577 MobiDBLite consensus disorder prediction 9 31 - -
Bma07g00187 577 MobiDBLite consensus disorder prediction 62 78 - -
Bma07g00187 577 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 291 577 - -
Bma07g00187 577 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 22 246 - -
Bma07g00187 577 MobiDBLite consensus disorder prediction 62 113 - -
Bma07g00187 577 Gene3D Transferase(Phosphotransferase) domain 1 288 338 - -
Bma07g00187 577 Gene3D Transferase(Phosphotransferase) domain 1 417 533 - -
Bma07g00187 577 MobiDBLite consensus disorder prediction 79 112 - -
Bma07g00187 577 MobiDBLite consensus disorder prediction 1 50 - -
Bma07g00187 577 PANTHER FLIPPASE KINASE 1-RELATED 22 246 - -
Bma07g00187 577 PANTHER FLIPPASE KINASE 1-RELATED 291 577 - -
Bma07g00187 577 SUPERFAMILY Protein kinase-like (PK-like) 115 541 IPR011009 -
Bma07g00187 577 MobiDBLite consensus disorder prediction 32 50 - -
Bma07g00187 577 Pfam Protein kinase domain 139 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00187 577 Pfam Protein kinase domain 419 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00187 577 ProSiteProfiles Protein kinase domain profile. 138 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00187 577 Gene3D Phosphorylase Kinase; domain 1 121 258 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00187 Bma11g00217 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00187 Bma-Chr7:2396949 Bma13g01124 Bma-Chr13:44342261 4.40E-174 dispersed
Bma13g00697 Bma-Chr13:19428421 Bma07g00187 Bma-Chr7:2396949 5.31E-83 dispersed
Bma11g00217 Bma-Chr11:1923390 Bma07g00187 Bma-Chr7:2396949 0 wgd
Bma14g00418 Bma-Chr14:4938822 Bma07g00187 Bma-Chr7:2396949 1.00E-122 wgd
Bma07g00187 Bma-Chr7:2396949 Bma07g01451 Bma-Chr7:50237397 1.69E-126 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66582 PF00069 Pkinase 9.60E-29 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00187 - - qsu:111996719 652.129