Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00193 ATGGCGAACAGAGTGGATCCTCTTGTTACTGGGAGGGTGATCGGAGATGTCGTTGATTATTTTACTCCGACTGTGAATATGACTGTTGCTTACAATTCCATCGCTCGGGTTTATAATGGGCAAGAGTTTCTTCCTGCTACGGTTTCAAGTAAACCTAAGGTTGAGGTTCATGGAGGCGACCTTAGATCCTTCTTCACTCTGGTGATGACTGACCCTGATGTTCCTGGTCCCAGTGATCCATACCTGAAAGAGCACTTGCACTGGTATCTAAATTTGTCATCTGTAATGGGTTTTTCTTTCTCAAATCATCATATGCATATGTGGGGACATGGATCAGAATACAGAAAAGGGCCAGATTCACTACGAGGAACACAGCCAGCAGCAATGCTAAGATTACCCTGCTATTGCTGTGCTCATGGCTGCAAGAACAACATAAACCATCCAAGAGCGAAGCCACTAAAGGACTTTAGAACTCTCCAAACCCACTACAAGAGGAAGCATGGATCCAAGCCATTTTCCTGCAGAAAGTGTGGGAAGCAATTTGCAGTGAAAGGAGATTGGAGAACCCACGAGAAAAATTGTGGGAAATTCTGGTATTGTTCTTGTGGGTCGGATTTTAAACACAAAAGATCACTCAAAGATCATATTAGGTCGTTTGGAAATGGACACTCTCCAAACCCTCCTCTTGATGACAAGGAATTTTGCACCAACGTGTCTGAAGAAGATGAATTTACTGTCTTCTGA 744 43.55 MANRVDPLVTGRVIGDVVDYFTPTVNMTVAYNSIARVYNGQEFLPATVSSKPKVEVHGGDLRSFFTLVMTDPDVPGPSDPYLKEHLHWYLNLSSVMGFSFSNHHMHMWGHGSEYRKGPDSLRGTQPAAMLRLPCYCCAHGCKNNINHPRAKPLKDFRTLQTHYKRKHGSKPFSCRKCGKQFAVKGDWRTHEKNCGKFWYCSCGSDFKHKRSLKDHIRSFGNGHSPNPPLDDKEFCTNVSEEDEFTVF 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2421379 2429924 - Bma024967.1 Bma07g00193 85330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00193 247 PANTHER ZINC FINGER PROTEIN WIP3-LIKE 99 243 - -
Bma07g00193 247 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Bma07g00193 247 Gene3D Classic Zinc Finger 149 225 - -
Bma07g00193 247 Gene3D - 2 126 IPR036610 -
Bma07g00193 247 SUPERFAMILY PEBP-like 12 90 IPR036610 -
Bma07g00193 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 192 228 IPR013087 -
Bma07g00193 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 172 192 IPR013087 -
Bma07g00193 247 SUPERFAMILY beta-beta-alpha zinc fingers 158 192 IPR036236 -
Bma07g00193 247 PANTHER ZINC FINGER PROTEIN WIP2 99 243 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00457 Bma-Chr4:3823478 Bma07g00193 Bma-Chr7:2421379 4.41E-77 dispersed
Bma04g01585 Bma-Chr4:51813052 Bma07g00193 Bma-Chr7:2421379 2.19E-41 dispersed
Bma07g00193 Bma-Chr7:2421379 Bma09g00850 Bma-Chr9:47527530 1.12E-76 dispersed
Bma07g00193 Bma-Chr7:2421379 Bma01g02723 Bma-Chr1:84574183 2.36E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57579 None None None None Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00193 - - zju:107409426 282.337