Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00205 ATGGAGTCTCGCATGGATCAATACGAAATCATGGAGCAGATCGGCCGTGGTGCCTTCGGAGCCGCTATTCTCGTCCATCACAGAGCCGAGAAAACGAAGTACGTGTTGAAGAAGATCCGACTTGCGCGGCAGACTGAAAGGTGTCGACGATCAGCTCATCAAGAGATGGCTCTCATTGCTCGAATCCAACACGGGTGCTACGTTTGCATTGTCACTGGTTACTGTGAAGGCGGAGATATGGCAGAGCTAATGAAGAAATCAAATGGTGTATTTTTTCCAGAAGAGAAACTTTGCAAGTGGTTCACACAGCTACTATTGGCAGTTGAATATCTACATTCAAAATTTGTGTTACATCGCGACCTTAAATGTTCCAACATCTTTCTTACCAAGGATCAGAATGTTCGTCTTGGGGATTTTGGGCTTGCTAAAACTCTGAAAGCAGATGACTTGGCTTCTTCAATTATTAAATTATATTCAGAAATAGTTATGGTTTTCTACCAGGTTGTGGTCGGAACTCCCAATTACATGTGTCCTGAACTTTTGGCTGATATTCCTTATGGCTTCAAATCTGATATTTGGTCACTGGGTTGCTGTATGTATGAGATGGCTGCTCATCGCCCTGCTTTTAAAGCTTTTGATATGGCAGGACTTATTAGCAAGATAAATCGTTCATCTATTGGACCCTTACCTCCATCCTATTCACCATCCTTGAAAACACTTATAAAGTGCATGCTTAGGAAGAACCCAGAGAATCGGCCAAGTGTAAGTCTCTTTTCTGAGGGTTTTTCAGACTTGAGTTCTTTCTTCCCTGATTGTTTAGGCTTGTACACATTTCAGGCATCTGAAATTTTGAAGCATCCTTATTTACAACCTTACTTGGAACAATGTCGTTCAACTTTTAATCCAGCTTACTATTCACTGACAAAGCCATTATCTTCTCGACGAAGTATGGCTGATAGTCAAAATAGTAACAGCTCAAGTAGTGATAAAGATAGTTTACTTTCAAGTGAGAAAAACATTTCAGAAATTATGGTGCACTGTGGCCATAAAGCTGCTGATTTGACTTCTGCTGATGATGAAGATGGTTCTTCTGAACACCTTCTGGCTTCTGAAGAAGAACAAGCCCACAACATTTGCACATTCAGAACGGAAGATCAAGAGGTCACGAAACCCTCACTTGAAACACCACGACCCAGTGTTGACATTAGACAACCAAAGACAATTAGAAGTATTATGATGAATTTAAAAGAAGGAAAAGTTCGAGAAAACTGTTCCCCAATGAGGGGCAATAGAATAAAAGTCGGAGGCGGACCAACCCAAAAGGTAAATATAGAAGCATCACCCAAGGTGATAAAACCAACTGCCACCCCCAATGCGCCAGTTCTTAAGCCCGGTGCAGATACTCCAACCATTGAGCCTGTAAAGGCAATTTCTGATTCTACAAAGAGAAATCATGGTTCAAATTCTTTAAAACATCAGTTGCCCATGGTGGACTCCACTCCAAAGACTAAAATGAAACATGATAGTATCCCGACCGGTGCAACAAAACAAGTTGCCGAAGATGGACCTACTGCAAAATCAAGGCAGAGAACACCTCCTTACCTTGCTAAACGACCCTCATTTCAAGCAAGGATGAGGCAACTGGGGAATGATGTTCCAGATTCAGCTTGTAATGCTGTGAAGACCAGTACTACTGATAGATATCTGGAGCCTGAGATGACCCCAAATCAAGCTGCCCCGCTTCATCTAAAACCTTTTTCTGAAGAGAAAGTTAAAGAAACGCCCAAGACTGCAGAAAGCAGAAGTTCCAAAGGAGTGCATACAGATACACGCAACTCTGTCTTCTCTTCCGTGTCAATTCCAGGTTTGGAAATATATGGTGAGGCGACAACTCCATTCACTGATCTGATGCATCCAATACCTTCTGATTACCGGAGTGGCGAACCTAAAACTACAAATCAAGAATCACAGCCACCTGGATACGCTCCTACTCAACATTTGCAACCTGGGACGTCAGAACAAGAATCGCTAAAGCTGTCTAAACATGATAACAAATCAGTAGGATGCTCTGTGAAAGATATTCTTGATCTTCAAAGTCCTAATGGTGGAAAGGAGAAATTGAGTACAGATGCATCAGATCCTCCTCCACGCCTGAATTCTGAAACAAACTTTGTCCGAAGAGATAATTTGCTGATGAACAAGCCTCAGAAGCACGACGCCACAATTTCATCTCAGGCATCACTGCTCAATGGTGATGACAAATTCACTGTTAGGGAACTTCTGTCTTCAGTTTCGGATACTAATCCTAAAGCGGTATCTCACTTATCATCAAGCCAAAAAGTTCTGCAGCCGGATAAAGAAATTTTGCTTGCTGAGAAACCAACCTCTTGCCATCTTCCCCAAGCTTTTGATGATGTCATACATGTAATACGGCACAGTACCTTCCGCGTTGGGAGTGAGCAGCCAGTTATGGAAACTGTGGAGGTGGGGGTTCAAAATGTCGATGTTGGTAAGTTCATAAATGTCGCAAGGGACGAAGTAGATGTGAAAAACTTGACCTCACCTATGACTCCTAAGCCAACTAGTGGCGCTGATACCATGACTTCCCAATCAAATATATCCGAGTATTCAAGTGGGATAGAAATGGATGTGAAAACCACATCCCCATTAGTACCAAAACTAGATTCCTCGGATCAAACAAAGGCCTGCTCTTCTGTCGCTGAAGAGGAAATGCCAGCAAAAGAAACGTTAGATGTCAATTCTTCAAGGCAGAGGGCTGAGGCACTTGAAGGATTGTTAGAATTATCTCAATTAAAGAGAAAAAGTGGTACGCCAGATTTTGAAGCTGAATCTAGTGATAGAGCTACTGGCCCTGGATTCCCTGAAGTATCCAGCAGCTCTCTTCAAACACCTGGATCTGTAAAAGGAGGAAAAAGAAGCAAATCAAGGCTTACAAAGTGCAGTGGATTGGTACCTCAAATTCCTGTTTCGAACGTAGTGACAGGTTCTCCTTCTGGCAATAATCTCACATCGGCAGGTCCTTGCCGTTATGACAGTTCCCTAGGTCTCTTGACAAAAAAGTTTATCAACCTAATCAAACAAGCAGAAGATGGTATCCTCGACCTGAATAAAGCTGCAGACACATTAGAGGTGCAAAAAAGGCGAATATATGATATAACAAACGTCCTTGAAGGAATTGGCCTGATAGAAAAGAAGCTGAAAAACAGAATTCAATGGAAGGGGCTTGATGTGTCTAGGCCAGGGGATGATGATGGAAATTTTTCTAGCTTACAGGCAGAAGTCGAAAACCTTTCCATTGAGGAGCGTGGATTAGATGAACAAATAAGAGAAATGCAGGAAAGATTAAGAGATCTCAGTGAAAATGACAACAATCAGAGGTGGCTTTTTGTCACTGAAGAAGATATCAAAGGTTTGCCTTGTTTCCAGAATGAAACGTTGATAGCTATTAAGGCTCCACATGGGACTACTTTAGAAGTACCTGATCCTGACGAGATTATGTGGCAGGCTGTTGACTATCCCCAAAGGAGGTACAGGATAGTCCTAAGAAGCACTATGGGTCCTATAGATGTTTACCTTGTCAGTCAATTTGAAGAGAAGTTTGAGGAGGTTAATGGTGTTGAAGTGCCTCTGACCACAACCTTACCTTCAACTTCCGGGTACGACGAGCCTCCCATGACAACAATGGAAATTGAAGAAAGTAGAGGGAAGAGTATTGAAATGCAAGAACCCGATGTTCATCAAATGTGCTCAGATCTTAGTGCTTCACAGGACTTTGTGGGTGGGATTATGAAGATTGTTCCCTCGGTAGTGGACAGTGACGCTGATTACTGGCTTCTATCAGACGCTGATGTTAGCATTACTGACATGTGGAGAACTGAAACTGGTGTTGAATGGAACGATTTGGGTACACTTCATGAAGATTACCCTATGTCCAGCATAGACGAGATATCCAATATCAGCTTGCCTCTTCCGCAGGCTTCACCAGCCCCATCTGCGGTAGGTGAATTACCTTCTAGTTCAAACCCTACTGGAAGTTGA 4059 42.65 MESRMDQYEIMEQIGRGAFGAAILVHHRAEKTKYVLKKIRLARQTERCRRSAHQEMALIARIQHGCYVCIVTGYCEGGDMAELMKKSNGVFFPEEKLCKWFTQLLLAVEYLHSKFVLHRDLKCSNIFLTKDQNVRLGDFGLAKTLKADDLASSIIKLYSEIVMVFYQVVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPSYSPSLKTLIKCMLRKNPENRPSVSLFSEGFSDLSSFFPDCLGLYTFQASEILKHPYLQPYLEQCRSTFNPAYYSLTKPLSSRRSMADSQNSNSSSSDKDSLLSSEKNISEIMVHCGHKAADLTSADDEDGSSEHLLASEEEQAHNICTFRTEDQEVTKPSLETPRPSVDIRQPKTIRSIMMNLKEGKVRENCSPMRGNRIKVGGGPTQKVNIEASPKVIKPTATPNAPVLKPGADTPTIEPVKAISDSTKRNHGSNSLKHQLPMVDSTPKTKMKHDSIPTGATKQVAEDGPTAKSRQRTPPYLAKRPSFQARMRQLGNDVPDSACNAVKTSTTDRYLEPEMTPNQAAPLHLKPFSEEKVKETPKTAESRSSKGVHTDTRNSVFSSVSIPGLEIYGEATTPFTDLMHPIPSDYRSGEPKTTNQESQPPGYAPTQHLQPGTSEQESLKLSKHDNKSVGCSVKDILDLQSPNGGKEKLSTDASDPPPRLNSETNFVRRDNLLMNKPQKHDATISSQASLLNGDDKFTVRELLSSVSDTNPKAVSHLSSSQKVLQPDKEILLAEKPTSCHLPQAFDDVIHVIRHSTFRVGSEQPVMETVEVGVQNVDVGKFINVARDEVDVKNLTSPMTPKPTSGADTMTSQSNISEYSSGIEMDVKTTSPLVPKLDSSDQTKACSSVAEEEMPAKETLDVNSSRQRAEALEGLLELSQLKRKSGTPDFEAESSDRATGPGFPEVSSSSLQTPGSVKGGKRSKSRLTKCSGLVPQIPVSNVVTGSPSGNNLTSAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGDDDGNFSSLQAEVENLSIEERGLDEQIREMQERLRDLSENDNNQRWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEIMWQAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEVNGVEVPLTTTLPSTSGYDEPPMTTMEIEESRGKSIEMQEPDVHQMCSDLSASQDFVGGIMKIVPSVVDSDADYWLLSDADVSITDMWRTETGVEWNDLGTLHEDYPMSSIDEISNISLPLPQASPAPSAVGELPSSSNPTGS 1352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2489691 2505606 - Bma024977.2 Bma07g00205 85342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00205 1352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Bma07g00205 1352 Pfam E2F/DP family winged-helix DNA-binding domain 1018 1081 IPR003316 GO:0005667|GO:0006355
Bma07g00205 1352 MobiDBLite consensus disorder prediction 381 400 - -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 887 904 - -
Bma07g00205 1352 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 280 614 - -
Bma07g00205 1352 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 684 937 - -
Bma07g00205 1352 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Bma07g00205 1352 ProSiteProfiles Protein kinase domain profile. 8 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00205 1352 SUPERFAMILY Protein kinase-like (PK-like) 4 322 IPR011009 -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 958 976 - -
Bma07g00205 1352 SUPERFAMILY E2F-DP heterodimerization region 1094 1202 IPR037241 -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 474 496 - -
Bma07g00205 1352 Gene3D - 1011 1083 IPR036388 -
Bma07g00205 1352 Gene3D Transferase(Phosphotransferase) domain 1 80 352 - -
Bma07g00205 1352 Gene3D - 1091 1202 - -
Bma07g00205 1352 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 1328 1352 - -
Bma07g00205 1352 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 280 614 - -
Bma07g00205 1352 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 256 - -
Bma07g00205 1352 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 684 937 - -
Bma07g00205 1352 SMART E2F_TDP_2 1016 1081 IPR003316 GO:0005667|GO:0006355
Bma07g00205 1352 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 256 - -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 851 870 - -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 646 675 - -
Bma07g00205 1352 Pfam Protein kinase domain 8 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00205 1352 SMART serkin_6 8 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00205 1352 MobiDBLite consensus disorder prediction 565 610 - -
Bma07g00205 1352 Coils Coil 1094 1128 - -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 887 983 - -
Bma07g00205 1352 Coils Coil 1032 1052 - -
Bma07g00205 1352 CDD E2F_DD 1095 1202 IPR032198 GO:0046983
Bma07g00205 1352 SUPERFAMILY Winged helix DNA-binding domain 1016 1079 IPR036390 -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 452 538 - -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 633 719 - -
Bma07g00205 1352 Pfam E2F transcription factor CC-MB domain 1097 1201 IPR032198 GO:0046983
Bma07g00205 1352 MobiDBLite consensus disorder prediction 585 606 - -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 854 870 - -
Bma07g00205 1352 CDD STKc_Nek 7 256 - -
Bma07g00205 1352 MobiDBLite consensus disorder prediction 311 334 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00205 Bma11g00246 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00197 Bma-Chr6:2405688 Bma07g00205 Bma-Chr7:2489691 8.20E-09 dispersed
Bma07g00205 Bma-Chr7:2489691 Bma13g00463 Bma-Chr13:8719873 8.60E-116 dispersed
Bma11g00249 Bma-Chr11:2181310 Bma07g00205 Bma-Chr7:2489691 0 transposed
Bma11g00246 Bma-Chr11:2168670 Bma07g00205 Bma-Chr7:2489691 0 wgd
Bma04g00537 Bma-Chr4:4712663 Bma07g00205 Bma-Chr7:2489691 6.04E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57580 PF00069 Pkinase 1.90E-50 CL0016 Bma TF
66583 PF00069 Pkinase 1.90E-50 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00205 K08857 - qsu:112029840 975.311