Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00218 ATGTCTCTGGACTCGATGGCCTCCGAACGTGTTTGTTATGTCCACTGCAACTTCTGCAACACTGTTTTGGCGGTAATCGTTCCATACAGTAGCTTGTTTACGATTGGGACAGTAAGATGTGGACATTGCGCCAATTTGCTGTCAGTGAATATGGGAACTTCCCTTCAAGTTACCCCCCCACAAAATTCACAGAAACAGCATCTAAGCCCTGGGGGTTCTAGTACAGACAGTGGAGGTTCATCTTCAACAACCATCAACGTAGCAGCCTTTGAGTCTCTAGATCATGAACCACCTAGACTGGCTCCAATTCGCCCACCAGAGAAAAGACAACGCGTCCCTTCTGCTTATAACAGGTTCATTAAAGATGAAATCCAAAGGATTAAAGCTGGTAATCCAGAAATAACCCACAGGGAAGCTTTTAGCACAGCAGCAAAAAATTGGGCGCATTTTCCTCATATTCATTTCGGGTTGATGGACGGGAACAAGCAAGCAAAGTTGGATCATTCGTTTGCTGGAGAAGGGATCAACAAGAAGGCAAAGACTAATGCTTTCTACTAA 558 44.8 MSLDSMASERVCYVHCNFCNTVLAVIVPYSSLFTIGTVRCGHCANLLSVNMGTSLQVTPPQNSQKQHLSPGGSSTDSGGSSSTTINVAAFESLDHEPPRLAPIRPPEKRQRVPSAYNRFIKDEIQRIKAGNPEITHREAFSTAAKNWAHFPHIHFGLMDGNKQAKLDHSFAGEGINKKAKTNAFY 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2604726 2609318 - Bma024990.1 Bma07g00218 85355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00218 185 PANTHER PROTEIN YABBY 6-RELATED 6 177 IPR006780 GO:0007275
Bma07g00218 185 MobiDBLite consensus disorder prediction 57 81 - -
Bma07g00218 185 PANTHER AXIAL REGULATOR YABBY 2-RELATED 6 177 - -
Bma07g00218 185 Gene3D High mobility group box domain 98 152 IPR036910 -
Bma07g00218 185 SUPERFAMILY HMG-box 102 150 IPR036910 -
Bma07g00218 185 Pfam YABBY protein 7 157 IPR006780 GO:0007275
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00320 Bma-Chr1:2644910 Bma07g00218 Bma-Chr7:2604726 3.46E-56 dispersed
Bma07g00218 Bma-Chr7:2604726 Bma11g00817 Bma-Chr11:25431353 5.61E-60 dispersed
Bma11g00256 Bma-Chr11:2247422 Bma07g00218 Bma-Chr7:2604726 2.17E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57581 PF04690 YABBY 5.00E-68 CL0114 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00218 K25796 - gmx:100500091 259.996